RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 CYP4F22Q6NT55 531 aa2.96□□□□□ -1.94
NEDD1-204ENST00000457368 CTU1Q7Z7A3 348 aaKnown RBP2.96□□□□□ -1.94
NEDD1-204ENST00000457368 FAM160A2Q8N612 972 aaPredicted RBP2.96□□□□□ -1.94
NEDD1-204ENST00000457368 EHBP1Q8NDI1 1231 aa2.96□□□□□ -1.94
NEDD1-204ENST00000457368 ZC3H15Q8WU90 426 aaKnown RBP2.96□□□□□ -1.94
NEDD1-204ENST00000457368 TMUB1Q9BVT8 246 aa2.96□□□□□ -1.94
NEDD1-204ENST00000457368 VPS33BQ9H267 617 aa2.96□□□□□ -1.94
NEDD1-204ENST00000457368 SNRPBP14678 240 aaKnown RBP2.95□□□□□ -1.94
NEDD1-204ENST00000457368 FXR1P51114 621 aaKnown RBP eCLIP2.95□□□□□ -1.94
NEDD1-204ENST00000457368 PRPF40BQ6NWY9 871 aaKnown RBP2.95□□□□□ -1.94
NEDD1-204ENST00000457368 BCORQ6W2J9 1755 aa2.95□□□□□ -1.94
NEDD1-204ENST00000457368 CTHP32929 405 aa2.95□□□□□ -1.94
NEDD1-204ENST00000457368 IARSP41252 1262 aaKnown RBP2.95□□□□□ -1.94
NEDD1-204ENST00000457368 SCNN1DP51172 638 aa2.95□□□□□ -1.94
NEDD1-204ENST00000457368 EAPPQ56P03 285 aaPredicted RBP2.95□□□□□ -1.94
NEDD1-204ENST00000457368 SULF1Q8IWU6 871 aa2.95□□□□□ -1.94
NEDD1-204ENST00000457368 DNAJC10Q8IXB1 793 aa2.95□□□□□ -1.94
NEDD1-204ENST00000457368 HPS1Q92902 700 aa2.95□□□□□ -1.94
NEDD1-204ENST00000457368 GGNBP2Q9H3C7 697 aa2.95□□□□□ -1.94
NEDD1-204ENST00000457368 STK17AQ9UEE5 414 aa2.95□□□□□ -1.94
NEDD1-204ENST00000457368 ANKRD31Q8N7Z5 1873 aa2.95□□□□□ -1.94
NEDD1-204ENST00000457368 RIC1Q4ADV7 1423 aa2.95□□□□□ -1.94
NEDD1-204ENST00000457368 GOLGB1Q14789 3259 aaKnown RBP2.95□□□□□ -1.94
NEDD1-204ENST00000457368 COL11A2P13942 1736 aaPredicted RBP2.94□□□□□ -1.94
NEDD1-204ENST00000457368 AOC2O75106 756 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 KDM4AO75164 1064 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 NPR1P16066 1061 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 AKAP4Q5JQC9 854 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 CFHR5Q9BXR6 569 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 ZBTB1Q9Y2K1 713 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 EMILIN1Q9Y6C2 1016 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 SCN7AQ01118 1682 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 FAM155AB1AL88 458 aaPredicted RBP2.94□□□□□ -1.94
NEDD1-204ENST00000457368 SOX10P56693 466 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 FMR1Q06787 632 aaKnown RBP eCLIP2.94□□□□□ -1.94
NEDD1-204ENST00000457368 EIF4A2Q14240 407 aaKnown RBP2.94□□□□□ -1.94
NEDD1-204ENST00000457368 C6orf118Q5T5N4 469 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 NUTM1Q86Y26 1132 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 ZNF622Q969S3 477 aaKnown RBP eCLIP2.94□□□□□ -1.94
NEDD1-204ENST00000457368 CCDC102AQ96A19 550 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 ADARB2Q9NS39 739 aaKnown RBP2.94□□□□□ -1.94
NEDD1-204ENST00000457368 PKD2L1Q9P0L9 805 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 CCDC88AQ3V6T2 1871 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 RNF123Q5XPI4 1314 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 ST20-MTHFSA0A0A6YYL1 179 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 LMOD1P29536 600 aaPredicted RBP2.94□□□□□ -1.94
NEDD1-204ENST00000457368 IL6STP40189 918 aaPredicted RBP2.94□□□□□ -1.94
NEDD1-204ENST00000457368 MTHFSP49914 203 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 RAB15P59190 212 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 TBC1D9BQ66K14 1250 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 CIAPIN1Q6FI81 312 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 CLEC4GQ6UXB4 293 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 TRPM7Q96QT4 1865 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 CARD11Q9BXL7 1154 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 TEX13AQ9BXU3 409 aaPredicted RBP2.94□□□□□ -1.94
NEDD1-204ENST00000457368 POLKQ9UBT6 870 aa2.94□□□□□ -1.94
NEDD1-204ENST00000457368 KIF7Q2M1P5 1343 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 PITPNM2Q9BZ72 1349 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 SLX4Q8IY92 1834 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 PTCD1O75127 700 aaKnown RBP2.93□□□□□ -1.94
NEDD1-204ENST00000457368 WFS1O76024 890 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 CAMTA2O94983 1202 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 EIF6P56537 245 aaKnown RBP2.93□□□□□ -1.94
NEDD1-204ENST00000457368 ST5P78524 1137 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 CRY2Q49AN0 593 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 ZNF530Q6P9A1 599 aaPredicted RBP2.93□□□□□ -1.94
NEDD1-204ENST00000457368 SYNE4Q8N205 404 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 CNBD1Q8NA66 436 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 NFATC2IPQ8NCF5 419 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 SLC52A2Q9HAB3 445 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 RNF186Q9NXI6 227 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 GPRC5DQ9NZD1 345 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 IBTKQ9P2D0 1353 aaPredicted RBP2.93□□□□□ -1.94
NEDD1-204ENST00000457368 TESPA1A2RU30 521 aaPredicted RBP2.93□□□□□ -1.94
NEDD1-204ENST00000457368 ALDH1B1P30837 517 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 HOXA10P31260 410 aaPredicted RBP2.93□□□□□ -1.94
NEDD1-204ENST00000457368 CDCA8Q53HL2 280 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 FBXO46Q6PJ61 603 aaPredicted RBP2.93□□□□□ -1.94
NEDD1-204ENST00000457368 CDC37L1Q7L3B6 337 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 WASF2Q9Y6W5 498 aa2.93□□□□□ -1.94
NEDD1-204ENST00000457368 MAGEB6P1A0A0J9YX57 407 aa2.92□□□□□ -1.94
NEDD1-204ENST00000457368 TRAF5O00463 557 aa2.92□□□□□ -1.94
NEDD1-204ENST00000457368 CELF2O95319 508 aaKnown RBP2.92□□□□□ -1.94
NEDD1-204ENST00000457368 STARD3NLO95772 234 aa2.92□□□□□ -1.94
NEDD1-204ENST00000457368 EPS15P42566 896 aa2.92□□□□□ -1.94
NEDD1-204ENST00000457368 GCGRP47871 477 aa2.92□□□□□ -1.94
NEDD1-204ENST00000457368 C1orf141Q5JVX7 400 aa2.92□□□□□ -1.94
NEDD1-204ENST00000457368 INTS3Q68E01 1043 aaKnown RBP2.92□□□□□ -1.94
NEDD1-204ENST00000457368 RGMBQ6NW40 437 aa2.92□□□□□ -1.94
NEDD1-204ENST00000457368 JDP2Q8WYK2 163 aa2.92□□□□□ -1.94
NEDD1-204ENST00000457368 USB1Q9BQ65 265 aaKnown RBP2.92□□□□□ -1.94
NEDD1-204ENST00000457368 CARD14Q9BXL6 1004 aa2.92□□□□□ -1.94
NEDD1-204ENST00000457368 ZNF277Q9NRM2 450 aaPredicted RBP2.92□□□□□ -1.94
NEDD1-204ENST00000457368 KIF20BQ96Q89 1820 aa2.92□□□□□ -1.94
NEDD1-204ENST00000457368 DLL1O00548 723 aa2.92□□□□□ -1.94
NEDD1-204ENST00000457368 NDUFV2P19404 249 aa2.92□□□□□ -1.94
NEDD1-204ENST00000457368 BICDL1Q6ZP65 573 aa2.92□□□□□ -1.94
NEDD1-204ENST00000457368 SETDB2Q96T68 719 aa2.92□□□□□ -1.94
NEDD1-204ENST00000457368 NUDT12Q9BQG2 462 aa2.92□□□□□ -1.94
NEDD1-204ENST00000457368 RTFDC1Q9BY42 306 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms