RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 DBNDD2Q9BQY9 259 aa17.96■□□□□ 0.47
SHANK2-210ENST00000449116 RTFDC1Q9BY42 306 aaPredicted RBP17.96■□□□□ 0.47
SHANK2-210ENST00000449116 TLR7Q9NYK1 1049 aaKnown RBP17.96■□□□□ 0.47
SHANK2-210ENST00000449116 ADORA1P30542 326 aa17.95■□□□□ 0.46
SHANK2-210ENST00000449116 C15orf52Q6ZUT6 534 aaKnown RBP17.95■□□□□ 0.46
SHANK2-210ENST00000449116 SUPT20HQ8NEM7 779 aa17.95■□□□□ 0.46
SHANK2-210ENST00000449116 OTUD7AQ8TE49 926 aaPredicted RBP17.95■□□□□ 0.46
SHANK2-210ENST00000449116 PSMD1Q99460 953 aa17.95■□□□□ 0.46
SHANK2-210ENST00000449116 ARFGEF1Q9Y6D6 1849 aa17.95■□□□□ 0.46
SHANK2-210ENST00000449116 SALL3Q9BXA9 1300 aa17.95■□□□□ 0.46
SHANK2-210ENST00000449116 MED23Q9ULK4 1368 aa17.94■□□□□ 0.46
SHANK2-210ENST00000449116 MX1P20591 662 aa17.94■□□□□ 0.46
SHANK2-210ENST00000449116 GORABQ5T7V8 394 aa17.94■□□□□ 0.46
SHANK2-210ENST00000449116 GPATCH3Q96I76 525 aa17.94■□□□□ 0.46
SHANK2-210ENST00000449116 EYA3Q99504 573 aa17.94■□□□□ 0.46
SHANK2-210ENST00000449116 ARAP2Q8WZ64 1704 aa17.94■□□□□ 0.46
SHANK2-210ENST00000449116 IRS2Q9Y4H2 1338 aa17.94■□□□□ 0.46
SHANK2-210ENST00000449116 KLRK1P26718 216 aa17.93■□□□□ 0.46
SHANK2-210ENST00000449116 FKBP4Q02790 459 aaKnown RBP eCLIP17.93■□□□□ 0.46
SHANK2-210ENST00000449116 CAVIN4Q5BKX8 364 aa17.93■□□□□ 0.46
SHANK2-210ENST00000449116 GPR101Q96P66 508 aaPredicted RBP17.93■□□□□ 0.46
SHANK2-210ENST00000449116 TTC41PQ6P2S7 1318 aa17.93■□□□□ 0.46
SHANK2-210ENST00000449116 WASHC4Q2M389 1173 aa17.92■□□□□ 0.46
SHANK2-210ENST00000449116 CCDC158Q5M9N0 1113 aa17.92■□□□□ 0.46
SHANK2-210ENST00000449116 SKAP1Q86WV1 359 aa17.92■□□□□ 0.46
SHANK2-210ENST00000449116 PLEKHM2Q8IWE5 1019 aa17.92■□□□□ 0.46
SHANK2-210ENST00000449116 FAM84BQ96KN1 310 aaPredicted RBP17.92■□□□□ 0.46
SHANK2-210ENST00000449116 TAOK3Q9H2K8 898 aa17.92■□□□□ 0.46
SHANK2-210ENST00000449116 ECHDC1Q9NTX5 307 aa17.92■□□□□ 0.46
SHANK2-210ENST00000449116 STAP2Q9UGK3 403 aa17.92■□□□□ 0.46
SHANK2-210ENST00000449116 GYG1P46976 350 aa17.91■□□□□ 0.46
SHANK2-210ENST00000449116 RGS3P49796 1198 aa17.91■□□□□ 0.46
SHANK2-210ENST00000449116 BCAMP50895 628 aa17.91■□□□□ 0.46
SHANK2-210ENST00000449116 PDE1AP54750 535 aa17.91■□□□□ 0.46
SHANK2-210ENST00000449116 TTC39AQ5SRH9 613 aa17.91■□□□□ 0.46
SHANK2-210ENST00000449116 CCDC102BQ68D86 513 aa17.91■□□□□ 0.46
SHANK2-210ENST00000449116 FBXO33Q7Z6M2 555 aa17.91■□□□□ 0.46
SHANK2-210ENST00000449116 TXNRD3Q86VQ6 643 aa17.91■□□□□ 0.46
SHANK2-210ENST00000449116 VPS37DQ86XT2 251 aa17.91■□□□□ 0.46
SHANK2-210ENST00000449116 PELP1Q8IZL8 1130 aaKnown RBP17.91■□□□□ 0.46
SHANK2-210ENST00000449116 ZC3H12CQ9C0D7 883 aaKnown RBP17.91■□□□□ 0.46
SHANK2-210ENST00000449116 OSBPL3Q9H4L5 887 aa17.91■□□□□ 0.46
SHANK2-210ENST00000449116 LTBP3Q9NS15 1303 aa17.91■□□□□ 0.46
SHANK2-210ENST00000449116 NFKBIEO00221 500 aa17.9■□□□□ 0.46
SHANK2-210ENST00000449116 RIMBP2O15034 1052 aa17.9■□□□□ 0.46
SHANK2-210ENST00000449116 YBX3P16989 372 aaKnown RBP eCLIP17.9■□□□□ 0.461e-6■■■□□ 16.3
SHANK2-210ENST00000449116 HIBADHP31937 336 aaKnown RBP17.9■□□□□ 0.46
SHANK2-210ENST00000449116 PHKA1P46020 1223 aa17.9■□□□□ 0.46
SHANK2-210ENST00000449116 ZNF804AQ7Z570 1209 aa17.9■□□□□ 0.46
SHANK2-210ENST00000449116 VPS33BQ9H267 617 aa17.9■□□□□ 0.46
SHANK2-210ENST00000449116 GNL3LQ9NVN8 582 aaKnown RBP17.9■□□□□ 0.46
SHANK2-210ENST00000449116 AOX1Q06278 1338 aa17.9■□□□□ 0.46
SHANK2-210ENST00000449116 FER1L6Q2WGJ9 1857 aa17.9■□□□□ 0.46
SHANK2-210ENST00000449116 ERC2O15083 957 aa17.89■□□□□ 0.45
SHANK2-210ENST00000449116 UQCRFS1P1P0C7P4 283 aa17.89■□□□□ 0.45
SHANK2-210ENST00000449116 KIAA2012Q0VF49 1180 aa17.89■□□□□ 0.45
SHANK2-210ENST00000449116 TSHZ3Q63HK5 1081 aa17.89■□□□□ 0.45
SHANK2-210ENST00000449116 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.89■□□□□ 0.45
SHANK2-210ENST00000449116 ZNF512BQ96KM6 892 aaPredicted RBP17.89■□□□□ 0.45
SHANK2-210ENST00000449116 PPIP5K2O43314 1243 aa17.88■□□□□ 0.45
SHANK2-210ENST00000449116 GLRX3O76003 335 aaKnown RBP17.88■□□□□ 0.45
SHANK2-210ENST00000449116 ATP5JP18859 108 aa17.88■□□□□ 0.45
SHANK2-210ENST00000449116 ARID4AP29374 1257 aaPredicted RBP17.88■□□□□ 0.45
SHANK2-210ENST00000449116 PI4K2BQ8TCG2 481 aa17.88■□□□□ 0.45
SHANK2-210ENST00000449116 COA1Q9GZY4 146 aa17.88■□□□□ 0.45
SHANK2-210ENST00000449116 ZNF277Q9NRM2 450 aaPredicted RBP17.88■□□□□ 0.45
SHANK2-210ENST00000449116 GOLGB1Q14789 3259 aaKnown RBP17.87■□□□□ 0.45
SHANK2-210ENST00000449116 ZBTB22O15209 634 aa17.87■□□□□ 0.45
SHANK2-210ENST00000449116 IARSP41252 1262 aaKnown RBP17.87■□□□□ 0.45
SHANK2-210ENST00000449116 GPR162Q16538 588 aa17.87■□□□□ 0.45
SHANK2-210ENST00000449116 AOC3Q16853 763 aa17.87■□□□□ 0.45
SHANK2-210ENST00000449116 ARHGAP27Q6ZUM4 889 aa17.87■□□□□ 0.45
SHANK2-210ENST00000449116 CD209Q9NNX6 404 aa17.87■□□□□ 0.45
SHANK2-210ENST00000449116 G3V3G9 751 aa17.86■□□□□ 0.45
SHANK2-210ENST00000449116 SEMA3EO15041 775 aa17.86■□□□□ 0.45
SHANK2-210ENST00000449116 IL1R1P14778 569 aa17.86■□□□□ 0.45
SHANK2-210ENST00000449116 RASSF7Q02833 373 aa17.86■□□□□ 0.45
SHANK2-210ENST00000449116 DCAF8Q5TAQ9 597 aa17.86■□□□□ 0.45
SHANK2-210ENST00000449116 LARGE2Q8N3Y3 721 aa17.86■□□□□ 0.45
SHANK2-210ENST00000449116 BOLA2Q9H3K6 86 aa17.86■□□□□ 0.45
SHANK2-210ENST00000449116 MCAMP43121 646 aa17.85■□□□□ 0.45
SHANK2-210ENST00000449116 DOK7Q18PE1 504 aa17.85■□□□□ 0.45
SHANK2-210ENST00000449116 TDRD7Q8NHU6 1098 aaKnown RBP17.85■□□□□ 0.45
SHANK2-210ENST00000449116 DENND2AQ9ULE3 1009 aa17.85■□□□□ 0.45
SHANK2-210ENST00000449116 GRIN3BO60391 1043 aa17.84■□□□□ 0.45
SHANK2-210ENST00000449116 FRAT2O75474 233 aaPredicted RBP17.84■□□□□ 0.45
SHANK2-210ENST00000449116 RASGRF1Q13972 1273 aa17.84■□□□□ 0.45
SHANK2-210ENST00000449116 SCARF1Q14162 830 aa17.84■□□□□ 0.45
SHANK2-210ENST00000449116 TTC22Q5TAA0 569 aa17.84■□□□□ 0.45
SHANK2-210ENST00000449116 PODNQ7Z5L7 613 aa17.84■□□□□ 0.45
SHANK2-210ENST00000449116 DBNDD1Q9H9R9 158 aa17.84■□□□□ 0.45
SHANK2-210ENST00000449116 IQSEC3Q9UPP2 1182 aaPredicted RBP17.84■□□□□ 0.45
SHANK2-210ENST00000449116 PDS5AQ29RF7 1337 aaKnown RBP17.83■□□□□ 0.44
SHANK2-210ENST00000449116 ECE2O60344 883 aa17.83■□□□□ 0.44
SHANK2-210ENST00000449116 SPATA5Q8NB90 893 aa17.83■□□□□ 0.44
SHANK2-210ENST00000449116 HAUS7Q99871 368 aa17.83■□□□□ 0.44
SHANK2-210ENST00000449116 HMG20BQ9P0W2 317 aa17.83■□□□□ 0.44
SHANK2-210ENST00000449116 LMNB1P20700 586 aa17.82■□□□□ 0.44
SHANK2-210ENST00000449116 PRELPP51888 382 aa17.82■□□□□ 0.44
SHANK2-210ENST00000449116 NIM1KQ8IY84 436 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms