RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 COA1Q9GZY4 146 aa16.62■□□□□ 0.25
SNHG4-201ENST00000448190 ZBTB40Q9NUA8 1239 aa16.62■□□□□ 0.25
SNHG4-201ENST00000448190 CEP126Q9P2H0 1117 aa16.62■□□□□ 0.25
SNHG4-201ENST00000448190 HACL1Q9UJ83 578 aa16.62■□□□□ 0.25
SNHG4-201ENST00000448190 JAG2Q9Y219 1238 aa16.62■□□□□ 0.25
SNHG4-201ENST00000448190 SBF1O95248 1867 aa16.62■□□□□ 0.25
SNHG4-201ENST00000448190 MED23Q9ULK4 1368 aa16.62■□□□□ 0.25
SNHG4-201ENST00000448190 IL15P40933 162 aaPredicted RBP16.61■□□□□ 0.25
SNHG4-201ENST00000448190 EAPPQ56P03 285 aaPredicted RBP16.61■□□□□ 0.25
SNHG4-201ENST00000448190 CEP85Q6P2H3 762 aa16.61■□□□□ 0.25
SNHG4-201ENST00000448190 PODNQ7Z5L7 613 aa16.61■□□□□ 0.25
SNHG4-201ENST00000448190 FAM84BQ96KN1 310 aaPredicted RBP16.61■□□□□ 0.25
SNHG4-201ENST00000448190 TAF1DQ9H5J8 278 aaPredicted RBP16.61■□□□□ 0.25
SNHG4-201ENST00000448190 CD209Q9NNX6 404 aa16.61■□□□□ 0.25
SNHG4-201ENST00000448190 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.61■□□□□ 0.25
SNHG4-201ENST00000448190 IRS2Q9Y4H2 1338 aa16.61■□□□□ 0.25
SNHG4-201ENST00000448190 USP17L3A6NCW0 530 aa16.6■□□□□ 0.25
SNHG4-201ENST00000448190 USP17L4A6NCW7 530 aa16.6■□□□□ 0.25
SNHG4-201ENST00000448190 CIAO1O76071 339 aa16.6■□□□□ 0.25
SNHG4-201ENST00000448190 VIL1P09327 827 aaKnown RBP16.6■□□□□ 0.25
SNHG4-201ENST00000448190 LMOD1P29536 600 aaPredicted RBP16.6■□□□□ 0.25
SNHG4-201ENST00000448190 HIBADHP31937 336 aaKnown RBP16.6■□□□□ 0.25
SNHG4-201ENST00000448190 EPHX2P34913 555 aa16.6■□□□□ 0.25
SNHG4-201ENST00000448190 GTF2IP78347 998 aa16.6■□□□□ 0.25
SNHG4-201ENST00000448190 TFCP2Q12800 502 aa16.6■□□□□ 0.25
SNHG4-201ENST00000448190 G3BP1Q13283 466 aaKnown RBP eCLIP16.6■□□□□ 0.25
SNHG4-201ENST00000448190 POLA2Q14181 598 aa16.6■□□□□ 0.25
SNHG4-201ENST00000448190 USP17L1Q7RTZ2 530 aa16.6■□□□□ 0.25
SNHG4-201ENST00000448190 SSH3Q8TE77 659 aa16.6■□□□□ 0.25
SNHG4-201ENST00000448190 CNOT7Q9UIV1 285 aaKnown RBP16.6■□□□□ 0.25
SNHG4-201ENST00000448190 IQSEC3Q9UPP2 1182 aaPredicted RBP16.6■□□□□ 0.25
SNHG4-201ENST00000448190 CLEC11AQ9Y240 323 aa16.6■□□□□ 0.25
SNHG4-201ENST00000448190 IQCA1LA6NCM1 817 aa16.59■□□□□ 0.25
SNHG4-201ENST00000448190 SURF6O75683 361 aaKnown RBP16.59■□□□□ 0.25
SNHG4-201ENST00000448190 TOMM70O94826 608 aa16.59■□□□□ 0.25
SNHG4-201ENST00000448190 BCAMP50895 628 aa16.59■□□□□ 0.25
SNHG4-201ENST00000448190 TIMM10P62072 90 aa16.59■□□□□ 0.25
SNHG4-201ENST00000448190 RBM26Q5T8P6 1007 aaKnown RBP16.59■□□□□ 0.25
SNHG4-201ENST00000448190 TTLL5Q6EMB2 1281 aa16.59■□□□□ 0.25
SNHG4-201ENST00000448190 C15orf52Q6ZUT6 534 aaKnown RBP16.59■□□□□ 0.25
SNHG4-201ENST00000448190 ZNF804AQ7Z570 1209 aa16.59■□□□□ 0.25
SNHG4-201ENST00000448190 GPRC5DQ9NZD1 345 aa16.59■□□□□ 0.25
SNHG4-201ENST00000448190 SUPT16HQ9Y5B9 1047 aaKnown RBP16.59■□□□□ 0.25
SNHG4-201ENST00000448190 FGFR2P21802 821 aa16.58■□□□□ 0.24
SNHG4-201ENST00000448190 OS9Q13438 667 aaPredicted RBP16.58■□□□□ 0.24
SNHG4-201ENST00000448190 PUM3Q15397 648 aaKnown RBP16.58■□□□□ 0.24
SNHG4-201ENST00000448190 VPS37DQ86XT2 251 aa16.58■□□□□ 0.24
SNHG4-201ENST00000448190 SIRT2Q8IXJ6 389 aa16.58■□□□□ 0.24
SNHG4-201ENST00000448190 BCL11AQ9H165 835 aa16.58■□□□□ 0.24
SNHG4-201ENST00000448190 FBXO3Q9UK99 471 aa16.58■□□□□ 0.24
SNHG4-201ENST00000448190 LRRC37AA6NMS7 1700 aa16.58■□□□□ 0.24
SNHG4-201ENST00000448190 SASH1O94885 1247 aa16.57■□□□□ 0.24
SNHG4-201ENST00000448190 IFIT1P09914 478 aaKnown RBP16.57■□□□□ 0.24
SNHG4-201ENST00000448190 SLC5A1P13866 664 aa16.57■□□□□ 0.24
SNHG4-201ENST00000448190 C1QTNF8P60827 252 aa16.57■□□□□ 0.24
SNHG4-201ENST00000448190 ATP2B3Q16720 1220 aa16.57■□□□□ 0.24
SNHG4-201ENST00000448190 DACT2Q5SW24 774 aa16.57■□□□□ 0.24
SNHG4-201ENST00000448190 RSBN1LQ6PCB5 846 aaPredicted RBP16.57■□□□□ 0.24
SNHG4-201ENST00000448190 SAMD7Q7Z3H4 446 aa16.57■□□□□ 0.24
SNHG4-201ENST00000448190 FBXO33Q7Z6M2 555 aa16.57■□□□□ 0.24
SNHG4-201ENST00000448190 MICALL2Q8IY33 904 aa16.57■□□□□ 0.24
SNHG4-201ENST00000448190 LPIN2Q92539 896 aa16.57■□□□□ 0.24
SNHG4-201ENST00000448190 CRBNQ96SW2 442 aa16.57■□□□□ 0.24
SNHG4-201ENST00000448190 H7C1D1 291 aa16.56■□□□□ 0.24
SNHG4-201ENST00000448190 IL1R1P14778 569 aa16.56■□□□□ 0.24
SNHG4-201ENST00000448190 ADORA1P30542 326 aa16.56■□□□□ 0.24
SNHG4-201ENST00000448190 CAVIN4Q5BKX8 364 aa16.56■□□□□ 0.24
SNHG4-201ENST00000448190 NEUROD6Q96NK8 337 aa16.56■□□□□ 0.24
SNHG4-201ENST00000448190 CCDC88AQ3V6T2 1871 aa16.56■□□□□ 0.24
SNHG4-201ENST00000448190 MYH3P11055 1940 aa16.55■□□□□ 0.24
SNHG4-201ENST00000448190 APBB1O00213 710 aa16.55■□□□□ 0.24
SNHG4-201ENST00000448190 FRAT2O75474 233 aaPredicted RBP16.55■□□□□ 0.24
SNHG4-201ENST00000448190 EGFRP00533 1210 aa16.55■□□□□ 0.24
SNHG4-201ENST00000448190 CHAF1AQ13111 956 aaPredicted RBP16.55■□□□□ 0.24
SNHG4-201ENST00000448190 TBC1D10BQ4KMP7 808 aaPredicted RBP16.55■□□□□ 0.24
SNHG4-201ENST00000448190 STRIP1Q5VSL9 837 aa16.55■□□□□ 0.24
SNHG4-201ENST00000448190 RPAP2Q8IXW5 612 aaPredicted RBP16.55■□□□□ 0.24
SNHG4-201ENST00000448190 TDRD7Q8NHU6 1098 aaKnown RBP16.55■□□□□ 0.24
SNHG4-201ENST00000448190 DPF2Q92785 391 aa16.55■□□□□ 0.24
SNHG4-201ENST00000448190 CHMP4BQ9H444 224 aaKnown RBP16.55■□□□□ 0.24
SNHG4-201ENST00000448190 EXOC6BQ9Y2D4 811 aa16.55■□□□□ 0.24
SNHG4-201ENST00000448190 LTBP1Q14766 1721 aa16.54■□□□□ 0.24
SNHG4-201ENST00000448190 F8W031 263 aaPredicted RBP16.54■□□□□ 0.24
SNHG4-201ENST00000448190 HIRAP54198 1017 aaPredicted RBP16.54■□□□□ 0.24
SNHG4-201ENST00000448190 RBM46Q8TBY0 533 aaKnown RBP16.54■□□□□ 0.24
SNHG4-201ENST00000448190 TRPM4Q8TD43 1214 aa16.54■□□□□ 0.24
SNHG4-201ENST00000448190 GMLQ99445 158 aa16.54■□□□□ 0.24
SNHG4-201ENST00000448190 ADARB2Q9NS39 739 aaKnown RBP16.54■□□□□ 0.24
SNHG4-201ENST00000448190 TIAM2Q8IVF5 1701 aa16.53■□□□□ 0.24
SNHG4-201ENST00000448190 A0A1B0GUL7 405 aa16.53■□□□□ 0.24
SNHG4-201ENST00000448190 RPS12P25398 132 aaKnown RBP16.53■□□□□ 0.24
SNHG4-201ENST00000448190 MAP1SQ66K74 1059 aaPredicted RBP16.53■□□□□ 0.24
SNHG4-201ENST00000448190 PNMA8AQ86V59 439 aaPredicted RBP16.53■□□□□ 0.24
SNHG4-201ENST00000448190 KIAA0825Q8IV33 1275 aa16.53■□□□□ 0.24
SNHG4-201ENST00000448190 CERS5Q8N5B7 392 aa16.53■□□□□ 0.24
SNHG4-201ENST00000448190 AGBL3Q8NEM8 1001 aa16.53■□□□□ 0.24
SNHG4-201ENST00000448190 NOP58Q9Y2X3 529 aaKnown RBP16.53■□□□□ 0.24
SNHG4-201ENST00000448190 SPEF2Q9C093 1822 aa16.52■□□□□ 0.24
SNHG4-201ENST00000448190 USP17L8P0C7I0 530 aa16.52■□□□□ 0.24
SNHG4-201ENST00000448190 PHKA1P46020 1223 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms