RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CSB-PGBD3P0DP91 1061 aa7.68□□□□□ -1.18
SDCBP-205ENST00000447267 KCNA3P22001 575 aa7.68□□□□□ -1.18
SDCBP-205ENST00000447267 KANK4Q5T7N3 995 aaPredicted RBP7.68□□□□□ -1.18
SDCBP-205ENST00000447267 LYSMD3Q7Z3D4 306 aa7.68□□□□□ -1.18
SDCBP-205ENST00000447267 ABTB2Q8N961 1025 aa7.68□□□□□ -1.18
SDCBP-205ENST00000447267 GPR101Q96P66 508 aaPredicted RBP7.68□□□□□ -1.18
SDCBP-205ENST00000447267 PRAM1Q96QH2 718 aa7.68□□□□□ -1.18
SDCBP-205ENST00000447267 CEP126Q9P2H0 1117 aa7.68□□□□□ -1.18
SDCBP-205ENST00000447267 ADGRF5Q8IZF2 1346 aa7.68□□□□□ -1.18
SDCBP-205ENST00000447267 TUBGCP6Q96RT7 1819 aa7.68□□□□□ -1.18
SDCBP-205ENST00000447267 CUL9Q8IWT3 2517 aa7.68□□□□□ -1.18
SDCBP-205ENST00000447267 CDC14CA4D256 554 aa7.67□□□□□ -1.18
SDCBP-205ENST00000447267 AOC2O75106 756 aa7.67□□□□□ -1.18
SDCBP-205ENST00000447267 GSK3AP49840 483 aa7.67□□□□□ -1.18
SDCBP-205ENST00000447267 GAS6Q14393 721 aa7.67□□□□□ -1.18
SDCBP-205ENST00000447267 CYP4F22Q6NT55 531 aa7.67□□□□□ -1.18
SDCBP-205ENST00000447267 DCAF5Q96JK2 942 aa7.67□□□□□ -1.18
SDCBP-205ENST00000447267 CARD10Q9BWT7 1032 aa7.67□□□□□ -1.18
SDCBP-205ENST00000447267 ABT1Q9ULW3 272 aaKnown RBP7.67□□□□□ -1.18
SDCBP-205ENST00000447267 WDR17Q8IZU2 1322 aa7.67□□□□□ -1.18
SDCBP-205ENST00000447267 LMO7Q8WWI1 1683 aa7.67□□□□□ -1.18
SDCBP-205ENST00000447267 MMP10P09238 476 aa7.66□□□□□ -1.18
SDCBP-205ENST00000447267 PHTF2Q8N3S3 785 aa7.66□□□□□ -1.18
SDCBP-205ENST00000447267 FLAD1Q8NFF5 587 aa7.66□□□□□ -1.18
SDCBP-205ENST00000447267 CAPNS2Q96L46 248 aa7.66□□□□□ -1.18
SDCBP-205ENST00000447267 ARHGEF10LQ9HCE6 1279 aa7.66□□□□□ -1.18
SDCBP-205ENST00000447267 RAB6BQ9NRW1 208 aa7.66□□□□□ -1.18
SDCBP-205ENST00000447267 RAPGEFL1Q9UHV5 662 aa7.66□□□□□ -1.18
SDCBP-205ENST00000447267 NUP155O75694 1391 aa7.66□□□□□ -1.18
SDCBP-205ENST00000447267 MEGF6O75095 1541 aa7.66□□□□□ -1.18
SDCBP-205ENST00000447267 A0A0C4DFX4 3053 aa7.65□□□□□ -1.18
SDCBP-205ENST00000447267 STAU1O95793 577 aaKnown RBP7.65□□□□□ -1.18
SDCBP-205ENST00000447267 CLN3Q13286 438 aa7.65□□□□□ -1.18
SDCBP-205ENST00000447267 QSER1Q2KHR3 1735 aa7.65□□□□□ -1.18
SDCBP-205ENST00000447267 ZNF385CQ66K41 422 aaPredicted RBP7.65□□□□□ -1.18
SDCBP-205ENST00000447267 SV2AQ7L0J3 742 aa7.65□□□□□ -1.18
SDCBP-205ENST00000447267 GRIP2Q9C0E4 1043 aa7.65□□□□□ -1.18
SDCBP-205ENST00000447267 TNRC6CQ9HCJ0 1690 aaKnown RBP7.65□□□□□ -1.18
SDCBP-205ENST00000447267 NHSQ6T4R5 1651 aa7.64□□□□□ -1.19
SDCBP-205ENST00000447267 SPATA31E1Q6ZUB1 1445 aa7.64□□□□□ -1.19
SDCBP-205ENST00000447267 ANKARQ7Z5J8 1434 aa7.64□□□□□ -1.19
SDCBP-205ENST00000447267 IL2RAP01589 272 aa7.64□□□□□ -1.19
SDCBP-205ENST00000447267 SLURP2P0DP57 97 aa7.64□□□□□ -1.19
SDCBP-205ENST00000447267 MCCD1P59942 119 aaPredicted RBP7.64□□□□□ -1.19
SDCBP-205ENST00000447267 POU4F2Q12837 409 aa7.64□□□□□ -1.19
SDCBP-205ENST00000447267 DALRD3Q5D0E6 543 aaKnown RBP7.64□□□□□ -1.19
SDCBP-205ENST00000447267 RNF20Q5VTR2 975 aa7.64□□□□□ -1.19
SDCBP-205ENST00000447267 DDX54Q8TDD1 881 aaKnown RBP7.64□□□□□ -1.19
SDCBP-205ENST00000447267 SIRT1Q96EB6 747 aa7.64□□□□□ -1.19
SDCBP-205ENST00000447267 ZNF837Q96EG3 531 aaPredicted RBP7.64□□□□□ -1.19
SDCBP-205ENST00000447267 GDPD2Q9HCC8 539 aa7.64□□□□□ -1.19
SDCBP-205ENST00000447267 PIM2Q9P1W9 311 aa7.64□□□□□ -1.19
SDCBP-205ENST00000447267 VIRMAQ69YN4 1812 aaKnown RBP7.64□□□□□ -1.19
SDCBP-205ENST00000447267 FAM181BA6NEQ2 426 aa7.63□□□□□ -1.19
SDCBP-205ENST00000447267 THBS1P07996 1170 aa7.63□□□□□ -1.19
SDCBP-205ENST00000447267 GPC1P35052 558 aa7.63□□□□□ -1.19
SDCBP-205ENST00000447267 VAC14Q08AM6 782 aa7.63□□□□□ -1.19
SDCBP-205ENST00000447267 DBN1Q16643 649 aa7.63□□□□□ -1.19
SDCBP-205ENST00000447267 CYP2U1Q7Z449 544 aa7.63□□□□□ -1.19
SDCBP-205ENST00000447267 POGKQ9P215 609 aa7.63□□□□□ -1.19
SDCBP-205ENST00000447267 HRH3Q9Y5N1 445 aa7.63□□□□□ -1.19
SDCBP-205ENST00000447267 BTAF1O14981 1849 aa7.63□□□□□ -1.19
SDCBP-205ENST00000447267 YTHDC2Q9H6S0 1430 aaKnown RBP7.62□□□□□ -1.19
SDCBP-205ENST00000447267 RPGRIP1LQ68CZ1 1315 aa7.62□□□□□ -1.19
SDCBP-205ENST00000447267 LMNB1P20700 586 aa7.62□□□□□ -1.19
SDCBP-205ENST00000447267 FMR1Q06787 632 aaKnown RBP eCLIP7.62□□□□□ -1.19
SDCBP-205ENST00000447267 NBPF10Q6P3W6 841 aaKnown RBP7.62□□□□□ -1.19
SDCBP-205ENST00000447267 NLRP13Q86W25 1043 aa7.62□□□□□ -1.19
SDCBP-205ENST00000447267 CASP8AP2Q9UKL3 1982 aa7.62□□□□□ -1.19
SDCBP-205ENST00000447267 PKD1L3Q7Z443 1732 aa7.61□□□□□ -1.19
SDCBP-205ENST00000447267 GPR25O00155 361 aa7.61□□□□□ -1.19
SDCBP-205ENST00000447267 DDNO94850 711 aaPredicted RBP7.61□□□□□ -1.19
SDCBP-205ENST00000447267 CHRNA5P30532 468 aa7.61□□□□□ -1.19
SDCBP-205ENST00000447267 MCM6Q14566 821 aa7.61□□□□□ -1.19
SDCBP-205ENST00000447267 PRDM6Q9NQX0 595 aa7.61□□□□□ -1.19
SDCBP-205ENST00000447267 SPATA31C2B4DYI2 1134 aa7.6□□□□□ -1.19
SDCBP-205ENST00000447267 ARHGEF15O94989 841 aa7.6□□□□□ -1.19
SDCBP-205ENST00000447267 EAPPQ56P03 285 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-205ENST00000447267 MAP1SQ66K74 1059 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-205ENST00000447267 LDHDQ86WU2 507 aa7.6□□□□□ -1.19
SDCBP-205ENST00000447267 ZNF330Q9Y3S2 320 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-205ENST00000447267 AKAP12Q02952 1782 aa7.6□□□□□ -1.19
SDCBP-205ENST00000447267 N4BP2Q86UW6 1770 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-205ENST00000447267 PPIP5K1Q6PFW1 1433 aa7.6□□□□□ -1.19
SDCBP-205ENST00000447267 TRPM1Q7Z4N2 1603 aa7.6□□□□□ -1.19
SDCBP-205ENST00000447267 COL18A1P39060 1754 aa7.59□□□□□ -1.19
SDCBP-205ENST00000447267 APBB1O00213 710 aa7.59□□□□□ -1.19
SDCBP-205ENST00000447267 ECE1P42892 770 aa7.59□□□□□ -1.19
SDCBP-205ENST00000447267 TRIM22Q8IYM9 498 aa7.59□□□□□ -1.19
SDCBP-205ENST00000447267 NLRP3Q96P20 1036 aa7.59□□□□□ -1.19
SDCBP-205ENST00000447267 ADAMTS8Q9UP79 889 aa7.59□□□□□ -1.19
SDCBP-205ENST00000447267 DYRK1BQ9Y463 629 aa7.59□□□□□ -1.19
SDCBP-205ENST00000447267 IFT172Q9UG01 1749 aa7.58□□□□□ -1.2
SDCBP-205ENST00000447267 ACEP12821 1306 aa7.58□□□□□ -1.2
SDCBP-205ENST00000447267 ADAMTS7Q9UKP4 1686 aa7.58□□□□□ -1.2
SDCBP-205ENST00000447267 WASLO00401 505 aaPredicted RBP7.58□□□□□ -1.2
SDCBP-205ENST00000447267 CA12O43570 354 aa7.58□□□□□ -1.2
SDCBP-205ENST00000447267 ABL2P42684 1182 aa7.58□□□□□ -1.2
SDCBP-205ENST00000447267 CENPCQ03188 943 aa7.58□□□□□ -1.2
SDCBP-205ENST00000447267 RGL3Q3MIN7 710 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms