RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CERKQ8TCT0 537 aa20.84■□□□□ 0.93
SMC6-206ENST00000446852 ZNF512BQ96KM6 892 aaPredicted RBP20.84■□□□□ 0.93
SMC6-206ENST00000446852 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.84■□□□□ 0.93
SMC6-206ENST00000446852 A0A1B0GUL6 1792 aa20.84■□□□□ 0.93
SMC6-206ENST00000446852 HSPD1P10809 573 aaKnown RBP20.83■□□□□ 0.93
SMC6-206ENST00000446852 TOB2Q14106 344 aaPredicted RBP20.83■□□□□ 0.93
SMC6-206ENST00000446852 PUM3Q15397 648 aaKnown RBP20.83■□□□□ 0.93
SMC6-206ENST00000446852 CCDC152Q4G0S7 254 aa20.83■□□□□ 0.93
SMC6-206ENST00000446852 ALDH8A1Q9H2A2 487 aaPredicted RBP20.83■□□□□ 0.93
SMC6-206ENST00000446852 LMBRD1Q9NUN5 540 aa20.83■□□□□ 0.93
SMC6-206ENST00000446852 EP400Q96L91 3159 aa20.83■□□□□ 0.92
SMC6-206ENST00000446852 GJD4Q96KN9 370 aaPredicted RBP20.83■□□□□ 0.92
SMC6-206ENST00000446852 DTNBO60941 627 aa20.82■□□□□ 0.92
SMC6-206ENST00000446852 HSPA1LP34931 641 aa20.82■□□□□ 0.92
SMC6-206ENST00000446852 PHKA1P46020 1223 aa20.82■□□□□ 0.92
SMC6-206ENST00000446852 MEX3CQ5U5Q3 659 aaKnown RBP20.82■□□□□ 0.92
SMC6-206ENST00000446852 STOX1Q6ZVD7 989 aa20.82■□□□□ 0.92
SMC6-206ENST00000446852 A0A0G2JLW4 131 aa20.82■□□□□ 0.92
SMC6-206ENST00000446852 CCDC102BQ68D86 513 aa20.82■□□□□ 0.92
SMC6-206ENST00000446852 NECAB1Q8N987 351 aa20.82■□□□□ 0.92
SMC6-206ENST00000446852 LPIN2Q92539 896 aa20.82■□□□□ 0.92
SMC6-206ENST00000446852 NEK1Q96PY6 1258 aa20.82■□□□□ 0.92
SMC6-206ENST00000446852 MPHOSPH8Q99549 860 aa20.82■□□□□ 0.92
SMC6-206ENST00000446852 SNAP23O00161 211 aa20.81■□□□□ 0.92
SMC6-206ENST00000446852 ZFYP08048 801 aaPredicted RBP20.81■□□□□ 0.92
SMC6-206ENST00000446852 BCL2L12Q9HB09 334 aa20.81■□□□□ 0.92
SMC6-206ENST00000446852 SMC3Q9UQE7 1217 aa20.81■□□□□ 0.92
SMC6-206ENST00000446852 AFF2P51816 1311 aa20.81■□□□□ 0.92
SMC6-206ENST00000446852 COL24A1Q17RW2 1714 aa20.81■□□□□ 0.92
SMC6-206ENST00000446852 LRRFIP1Q32MZ4 808 aaKnown RBP20.81■□□□□ 0.92
SMC6-206ENST00000446852 DOCK2Q92608 1830 aa20.81■□□□□ 0.92
SMC6-206ENST00000446852 WDR33Q9C0J8 1336 aaKnown RBP20.81■□□□□ 0.92
SMC6-206ENST00000446852 FOXP2O15409 715 aa20.8■□□□□ 0.92
SMC6-206ENST00000446852 ARID4AP29374 1257 aaPredicted RBP20.8■□□□□ 0.92
SMC6-206ENST00000446852 ANKRD1Q15327 319 aa20.8■□□□□ 0.92
SMC6-206ENST00000446852 WASHC4Q2M389 1173 aa20.8■□□□□ 0.92
SMC6-206ENST00000446852 KLHL40Q2TBA0 621 aa20.8■□□□□ 0.92
SMC6-206ENST00000446852 ERFEQ4G0M1 354 aa20.8■□□□□ 0.92
SMC6-206ENST00000446852 HSP90B1P14625 803 aaKnown RBP20.8■□□□□ 0.92
SMC6-206ENST00000446852 RC3H1Q5TC82 1133 aaKnown RBP20.8■□□□□ 0.92
SMC6-206ENST00000446852 C3orf67Q6ZVT6 689 aa20.8■□□□□ 0.92
SMC6-206ENST00000446852 DDX49Q9Y6V7 483 aaKnown RBP20.8■□□□□ 0.92
SMC6-206ENST00000446852 C4AP0C0L4 1744 aa20.79■□□□□ 0.92
SMC6-206ENST00000446852 C4BP0C0L5 1744 aa20.79■□□□□ 0.92
SMC6-206ENST00000446852 FSD2A1L4K1 749 aa20.79■□□□□ 0.92
SMC6-206ENST00000446852 PUS7LQ9H0K6 701 aaKnown RBP20.79■□□□□ 0.92
SMC6-206ENST00000446852 PRPF40AO75400 957 aaKnown RBP20.79■□□□□ 0.92
SMC6-206ENST00000446852 SYT1P21579 422 aa20.79■□□□□ 0.92
SMC6-206ENST00000446852 GJB2P29033 226 aa20.79■□□□□ 0.92
SMC6-206ENST00000446852 TBC1D9BQ66K14 1250 aa20.79■□□□□ 0.92
SMC6-206ENST00000446852 APPBP2Q92624 585 aa20.79■□□□□ 0.92
SMC6-206ENST00000446852 PIH1D3Q9NQM4 214 aaKnown RBP20.79■□□□□ 0.92
SMC6-206ENST00000446852 CCNL1Q9UK58 526 aaPredicted RBP20.79■□□□□ 0.92
SMC6-206ENST00000446852 ATRNO75882 1429 aa20.78■□□□□ 0.92
SMC6-206ENST00000446852 RPS6KA4O75676 772 aa20.78■□□□□ 0.92
SMC6-206ENST00000446852 BICDL1Q6ZP65 573 aa20.78■□□□□ 0.92
SMC6-206ENST00000446852 AMIGO3Q86WK7 504 aa20.78■□□□□ 0.92
SMC6-206ENST00000446852 SRP68Q9UHB9 627 aaKnown RBP20.78■□□□□ 0.92
SMC6-206ENST00000446852 GNPATO15228 680 aa20.78■□□□□ 0.92
SMC6-206ENST00000446852 IGHMBP2P38935 993 aaKnown RBP20.78■□□□□ 0.92
SMC6-206ENST00000446852 SLC5A1P13866 664 aa20.77■□□□□ 0.92
SMC6-206ENST00000446852 TTLL5Q6EMB2 1281 aa20.77■□□□□ 0.92
SMC6-206ENST00000446852 NARFQ9UHQ1 456 aa20.77■□□□□ 0.92
SMC6-206ENST00000446852 RGL2O15211 777 aa20.77■□□□□ 0.91
SMC6-206ENST00000446852 STX6O43752 255 aa20.77■□□□□ 0.91
SMC6-206ENST00000446852 UQCRFS1P1P0C7P4 283 aa20.77■□□□□ 0.91
SMC6-206ENST00000446852 ADD2P35612 726 aa20.76■□□□□ 0.91
SMC6-206ENST00000446852 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.76■□□□□ 0.916e-6■■■□□ 19.2
SMC6-206ENST00000446852 ONECUT3O60422 494 aaPredicted RBP20.76■□□□□ 0.91
SMC6-206ENST00000446852 ZSCAN22P10073 491 aaPredicted RBP20.76■□□□□ 0.91
SMC6-206ENST00000446852 TTF1Q15361 905 aaPredicted RBP20.76■□□□□ 0.91
SMC6-206ENST00000446852 Q6ZUG5 572 aa20.76■□□□□ 0.91
SMC6-206ENST00000446852 GOLGA6L3A6NEY3 463 aa20.75■□□□□ 0.91
SMC6-206ENST00000446852 E7EWF7 191 aa20.75■□□□□ 0.91
SMC6-206ENST00000446852 FOXD4L6Q3SYB3 417 aaPredicted RBP20.75■□□□□ 0.91
SMC6-206ENST00000446852 FOXD4L3Q6VB84 417 aaPredicted RBP20.75■□□□□ 0.91
SMC6-206ENST00000446852 CHRNDQ07001 517 aa20.75■□□□□ 0.91
SMC6-206ENST00000446852 RASGRF1Q13972 1273 aa20.75■□□□□ 0.91
SMC6-206ENST00000446852 SLC9C2Q5TAH2 1124 aa20.75■□□□□ 0.91
SMC6-206ENST00000446852 GPT2Q8TD30 523 aa20.75■□□□□ 0.91
SMC6-206ENST00000446852 LRRC2Q9BYS8 371 aa20.75■□□□□ 0.91
SMC6-206ENST00000446852 GPAA1O43292 621 aa20.74■□□□□ 0.91
SMC6-206ENST00000446852 IDH1O75874 414 aaKnown RBP20.74■□□□□ 0.91
SMC6-206ENST00000446852 SF3B3Q15393 1217 aaKnown RBP20.74■□□□□ 0.91
SMC6-206ENST00000446852 STK3Q13188 491 aa20.73■□□□□ 0.91
SMC6-206ENST00000446852 SEPT12Q8IYM1 358 aa20.73■□□□□ 0.91
SMC6-206ENST00000446852 SPATA5Q8NB90 893 aa20.73■□□□□ 0.91
SMC6-206ENST00000446852 CDC5LQ99459 802 aaKnown RBP20.73■□□□□ 0.91
SMC6-206ENST00000446852 HMGB1P09429 215 aaKnown RBP20.73■□□□□ 0.91
SMC6-206ENST00000446852 ZSCAN25Q6NSZ9 544 aa20.73■□□□□ 0.91
SMC6-206ENST00000446852 DHX32Q7L7V1 743 aaKnown RBP20.73■□□□□ 0.91
SMC6-206ENST00000446852 WWC3Q9ULE0 1092 aa20.73■□□□□ 0.91
SMC6-206ENST00000446852 TRPC5Q9UL62 973 aaPredicted RBP20.72■□□□□ 0.91
SMC6-206ENST00000446852 RTCBQ9Y3I0 505 aaKnown RBP20.72■□□□□ 0.91
SMC6-206ENST00000446852 FGAP02671 866 aa20.72■□□□□ 0.91
SMC6-206ENST00000446852 PDE6AP16499 860 aa20.72■□□□□ 0.91
SMC6-206ENST00000446852 EXOSC10Q01780 885 aaKnown RBP20.72■□□□□ 0.91
SMC6-206ENST00000446852 L1TD1Q5T7N2 865 aaKnown RBP20.72■□□□□ 0.91
SMC6-206ENST00000446852 BRF1Q92994 677 aa20.72■□□□□ 0.91
SMC6-206ENST00000446852 MTMR6Q9Y217 621 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms