RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 RLBP1P12271 317 aa29.93■■■□□ 2.38
C9orf3-207ENST00000445181 HELBQ8NG08 1087 aaPredicted RBP29.93■■■□□ 2.38
C9orf3-207ENST00000445181 PLIN1O60240 522 aa29.92■■■□□ 2.38
C9orf3-207ENST00000445181 ZNF804BA4D1E1 1349 aa29.92■■■□□ 2.38
C9orf3-207ENST00000445181 SHTN1A0MZ66 631 aa29.91■■■□□ 2.38
C9orf3-207ENST00000445181 WTIPA6NIX2 430 aaPredicted RBP29.91■■■□□ 2.38
C9orf3-207ENST00000445181 H7C1D1 291 aa29.91■■■□□ 2.38
C9orf3-207ENST00000445181 TAF5LO75529 589 aa29.91■■■□□ 2.38
C9orf3-207ENST00000445181 DPF2Q92785 391 aa29.91■■■□□ 2.38
C9orf3-207ENST00000445181 PUS3Q9BZE2 481 aaKnown RBP29.91■■■□□ 2.38
C9orf3-207ENST00000445181 GNAI2P04899 355 aa29.9■■■□□ 2.38
C9orf3-207ENST00000445181 MICALL2Q8IY33 904 aa29.9■■■□□ 2.38
C9orf3-207ENST00000445181 KLHDC4Q8TBB5 520 aa29.9■■■□□ 2.38
C9orf3-207ENST00000445181 PANK1Q8TE04 598 aa29.9■■■□□ 2.38
C9orf3-207ENST00000445181 HIRAP54198 1017 aaPredicted RBP29.89■■■□□ 2.38
C9orf3-207ENST00000445181 MED23Q9ULK4 1368 aa29.89■■■□□ 2.37
C9orf3-207ENST00000445181 FMR1Q06787 632 aaKnown RBP eCLIP29.88■■■□□ 2.37
C9orf3-207ENST00000445181 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.88■■■□□ 2.37
C9orf3-207ENST00000445181 TRPM4Q8TD43 1214 aa29.88■■■□□ 2.37
C9orf3-207ENST00000445181 CNTNAP1P78357 1384 aa29.88■■■□□ 2.37
C9orf3-207ENST00000445181 TRAF5O00463 557 aa29.87■■■□□ 2.37
C9orf3-207ENST00000445181 RPS12P25398 132 aaKnown RBP29.87■■■□□ 2.37
C9orf3-207ENST00000445181 PGAP2Q9UHJ9 254 aa29.87■■■□□ 2.37
C9orf3-207ENST00000445181 MROH5Q6ZUA9 1318 aa29.87■■■□□ 2.37
C9orf3-207ENST00000445181 VIL1P09327 827 aaKnown RBP29.86■■■□□ 2.37
C9orf3-207ENST00000445181 LRRC24Q50LG9 513 aa29.86■■■□□ 2.37
C9orf3-207ENST00000445181 ZC3H15Q8WU90 426 aaKnown RBP29.86■■■□□ 2.37
C9orf3-207ENST00000445181 RIPOR2Q9Y4F9 1068 aa29.86■■■□□ 2.37
C9orf3-207ENST00000445181 RFX5P48382 616 aaPredicted RBP29.85■■■□□ 2.37
C9orf3-207ENST00000445181 METTL24Q5JXM2 366 aa29.85■■■□□ 2.37
C9orf3-207ENST00000445181 SNAP23O00161 211 aa29.84■■■□□ 2.37
C9orf3-207ENST00000445181 SRGAP3O43295 1099 aa29.84■■■□□ 2.37
C9orf3-207ENST00000445181 PTPN12Q05209 780 aaKnown RBP29.84■■■□□ 2.37
C9orf3-207ENST00000445181 SAMD7Q7Z3H4 446 aa29.84■■■□□ 2.37
C9orf3-207ENST00000445181 ABT1Q9ULW3 272 aaKnown RBP29.84■■■□□ 2.37
C9orf3-207ENST00000445181 A0A1B0GUL6 1792 aa29.83■■■□□ 2.37
C9orf3-207ENST00000445181 KLRK1P26718 216 aa29.83■■■□□ 2.37
C9orf3-207ENST00000445181 SIL1Q9H173 461 aa29.83■■■□□ 2.37
C9orf3-207ENST00000445181 EYA2O00167 538 aa29.82■■■□□ 2.36
C9orf3-207ENST00000445181 ZBTB7BO15156 539 aaPredicted RBP29.82■■■□□ 2.36
C9orf3-207ENST00000445181 VEGFBP49765 207 aa29.82■■■□□ 2.36
C9orf3-207ENST00000445181 DEFB115Q30KQ5 88 aa29.82■■■□□ 2.36
C9orf3-207ENST00000445181 TBC1D10BQ4KMP7 808 aaPredicted RBP29.82■■■□□ 2.36
C9orf3-207ENST00000445181 TXNRD3Q86VQ6 643 aa29.82■■■□□ 2.36
C9orf3-207ENST00000445181 GLIS2Q9BZE0 524 aaPredicted RBP29.82■■■□□ 2.36
C9orf3-207ENST00000445181 SCN9AQ15858 1988 aa29.81■■■□□ 2.36
C9orf3-207ENST00000445181 RASSF10A6NK89 507 aa29.81■■■□□ 2.36
C9orf3-207ENST00000445181 HSPA1AP0DMV8 641 aaKnown RBP29.81■■■□□ 2.36
C9orf3-207ENST00000445181 HSPA1BP0DMV9 641 aaKnown RBP29.81■■■□□ 2.36
C9orf3-207ENST00000445181 RBM26Q5T8P6 1007 aaKnown RBP29.81■■■□□ 2.36
C9orf3-207ENST00000445181 CST9Q5W186 159 aa29.81■■■□□ 2.36
C9orf3-207ENST00000445181 PODNQ7Z5L7 613 aa29.81■■■□□ 2.36
C9orf3-207ENST00000445181 COA1Q9GZY4 146 aa29.81■■■□□ 2.36
C9orf3-207ENST00000445181 MTX1Q13505 466 aa29.8■■■□□ 2.36
C9orf3-207ENST00000445181 C1orf115Q9H7X2 142 aa29.8■■■□□ 2.36
C9orf3-207ENST00000445181 EGFRP00533 1210 aa29.79■■■□□ 2.36
C9orf3-207ENST00000445181 UBE4AQ14139 1066 aa29.79■■■□□ 2.36
C9orf3-207ENST00000445181 MVPQ14764 893 aaKnown RBP29.79■■■□□ 2.36
C9orf3-207ENST00000445181 RSBN1LQ6PCB5 846 aaPredicted RBP29.79■■■□□ 2.36
C9orf3-207ENST00000445181 CDC37L1Q7L3B6 337 aa29.79■■■□□ 2.36
C9orf3-207ENST00000445181 PA2G4Q9UQ80 394 aaKnown RBP29.79■■■□□ 2.36
C9orf3-207ENST00000445181 COG6Q9Y2V7 657 aa29.79■■■□□ 2.36
C9orf3-207ENST00000445181 USP17L3A6NCW0 530 aa29.78■■■□□ 2.36
C9orf3-207ENST00000445181 USP17L4A6NCW7 530 aa29.78■■■□□ 2.36
C9orf3-207ENST00000445181 USP17L1Q7RTZ2 530 aa29.78■■■□□ 2.36
C9orf3-207ENST00000445181 ZNF804AQ7Z570 1209 aa29.78■■■□□ 2.36
C9orf3-207ENST00000445181 FBXW7Q969H0 707 aa29.78■■■□□ 2.36
C9orf3-207ENST00000445181 FBXO3Q9UK99 471 aa29.78■■■□□ 2.36
C9orf3-207ENST00000445181 C15orf52Q6ZUT6 534 aaKnown RBP29.77■■■□□ 2.36
C9orf3-207ENST00000445181 AGBL3Q8NEM8 1001 aa29.77■■■□□ 2.36
C9orf3-207ENST00000445181 COPRSQ9NQ92 184 aa29.77■■■□□ 2.36
C9orf3-207ENST00000445181 DDX19BQ9UMR2 479 aa29.77■■■□□ 2.36
C9orf3-207ENST00000445181 CIAO1O76071 339 aa29.76■■■□□ 2.35
C9orf3-207ENST00000445181 PDE8BO95263 885 aa29.76■■■□□ 2.35
C9orf3-207ENST00000445181 CELF2O95319 508 aaKnown RBP29.75■■■□□ 2.35
C9orf3-207ENST00000445181 PDE3AQ14432 1141 aa29.75■■■□□ 2.35
C9orf3-207ENST00000445181 ATG9AQ7Z3C6 839 aa29.75■■■□□ 2.35
C9orf3-207ENST00000445181 USP48Q86UV5 1035 aa29.75■■■□□ 2.35
C9orf3-207ENST00000445181 TRPM7Q96QT4 1865 aa29.74■■■□□ 2.35
C9orf3-207ENST00000445181 PNMA6EA0A0J9YXQ4 647 aa29.74■■■□□ 2.35
C9orf3-207ENST00000445181 IL15P40933 162 aaPredicted RBP29.74■■■□□ 2.35
C9orf3-207ENST00000445181 KIF4BQ2VIQ3 1234 aa29.74■■■□□ 2.35
C9orf3-207ENST00000445181 C20orf194Q5TEA3 1177 aa29.74■■■□□ 2.35
C9orf3-207ENST00000445181 VGLL2Q8N8G2 317 aa29.74■■■□□ 2.35
C9orf3-207ENST00000445181 IRS2Q9Y4H2 1338 aa29.73■■■□□ 2.35
C9orf3-207ENST00000445181 ZNF609O15014 1411 aa29.73■■■□□ 2.35
C9orf3-207ENST00000445181 ZNF280AP59817 542 aaPredicted RBP29.73■■■□□ 2.35
C9orf3-207ENST00000445181 PUM3Q15397 648 aaKnown RBP29.73■■■□□ 2.35
C9orf3-207ENST00000445181 IFFO2Q5TF58 517 aa29.73■■■□□ 2.35
C9orf3-207ENST00000445181 GMLQ99445 158 aa29.73■■■□□ 2.35
C9orf3-207ENST00000445181 CHMP4BQ9H444 224 aaKnown RBP29.73■■■□□ 2.35
C9orf3-207ENST00000445181 CD209Q9NNX6 404 aa29.73■■■□□ 2.35
C9orf3-207ENST00000445181 CEP126Q9P2H0 1117 aa29.73■■■□□ 2.35
C9orf3-207ENST00000445181 DCPSQ96C86 337 aaKnown RBP29.72■■■□□ 2.35
C9orf3-207ENST00000445181 ZNF408Q9H9D4 720 aa29.72■■■□□ 2.35
C9orf3-207ENST00000445181 TLL2Q9Y6L7 1015 aa29.72■■■□□ 2.35
C9orf3-207ENST00000445181 WDR33Q9C0J8 1336 aaKnown RBP29.71■■■□□ 2.35
C9orf3-207ENST00000445181 USP17L8P0C7I0 530 aa29.71■■■□□ 2.35
C9orf3-207ENST00000445181 GYG1P46976 350 aa29.71■■■□□ 2.35
C9orf3-207ENST00000445181 ATP8B2P98198 1209 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms