RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 USP44Q9H0E7 712 aa26.48■■□□□ 1.83
CDKN3-204ENST00000442975 MKRN1Q9UHC7 482 aaKnown RBP26.48■■□□□ 1.83
CDKN3-204ENST00000442975 EGFRP00533 1210 aa26.46■■□□□ 1.83
CDKN3-204ENST00000442975 BRPF1P55201 1214 aaPredicted RBP26.46■■□□□ 1.83
CDKN3-204ENST00000442975 FMR1Q06787 632 aaKnown RBP eCLIP26.46■■□□□ 1.83
CDKN3-204ENST00000442975 RABL6Q3YEC7 729 aaPredicted RBP26.46■■□□□ 1.83
CDKN3-204ENST00000442975 KIF4BQ2VIQ3 1234 aa26.45■■□□□ 1.82
CDKN3-204ENST00000442975 AGBL3Q8NEM8 1001 aa26.45■■□□□ 1.82
CDKN3-204ENST00000442975 GLIS2Q9BZE0 524 aaPredicted RBP26.45■■□□□ 1.82
CDKN3-204ENST00000442975 SCN9AQ15858 1988 aa26.45■■□□□ 1.82
CDKN3-204ENST00000442975 UBTFL1P0CB47 393 aaPredicted RBP26.44■■□□□ 1.82
CDKN3-204ENST00000442975 ZC3H15Q8WU90 426 aaKnown RBP26.44■■□□□ 1.82
CDKN3-204ENST00000442975 PUS3Q9BZE2 481 aaKnown RBP26.44■■□□□ 1.82
CDKN3-204ENST00000442975 ABT1Q9ULW3 272 aaKnown RBP26.44■■□□□ 1.82
CDKN3-204ENST00000442975 ZNF609O15014 1411 aa26.43■■□□□ 1.82
CDKN3-204ENST00000442975 FRAT1Q92837 279 aaPredicted RBP26.43■■□□□ 1.82
CDKN3-204ENST00000442975 MXD3Q9BW11 206 aa26.43■■□□□ 1.82
CDKN3-204ENST00000442975 DACT2Q5SW24 774 aa26.42■■□□□ 1.82
CDKN3-204ENST00000442975 ZBED9Q6R2W3 1325 aa26.41■■□□□ 1.82
CDKN3-204ENST00000442975 BCAR3O75815 825 aa26.41■■□□□ 1.82
CDKN3-204ENST00000442975 USP17L8P0C7I0 530 aa26.41■■□□□ 1.82
CDKN3-204ENST00000442975 JMYQ8N9B5 988 aa26.41■■□□□ 1.82
CDKN3-204ENST00000442975 ZNF408Q9H9D4 720 aa26.41■■□□□ 1.82
CDKN3-204ENST00000442975 CNTNAP1P78357 1384 aa26.41■■□□□ 1.82
CDKN3-204ENST00000442975 STRIP1Q5VSL9 837 aa26.4■■□□□ 1.82
CDKN3-204ENST00000442975 ZNF804AQ7Z570 1209 aa26.4■■□□□ 1.82
CDKN3-204ENST00000442975 KLHDC4Q8TBB5 520 aa26.4■■□□□ 1.82
CDKN3-204ENST00000442975 GMLQ99445 158 aa26.4■■□□□ 1.82
CDKN3-204ENST00000442975 PGAP2Q9UHJ9 254 aa26.4■■□□□ 1.82
CDKN3-204ENST00000442975 IRS2Q9Y4H2 1338 aa26.39■■□□□ 1.82
CDKN3-204ENST00000442975 ZNF280AP59817 542 aaPredicted RBP26.39■■□□□ 1.82
CDKN3-204ENST00000442975 GTF2IP78347 998 aa26.39■■□□□ 1.82
CDKN3-204ENST00000442975 METTL24Q5JXM2 366 aa26.39■■□□□ 1.82
CDKN3-204ENST00000442975 CDC37L1Q7L3B6 337 aa26.39■■□□□ 1.82
CDKN3-204ENST00000442975 CD209Q9NNX6 404 aa26.39■■□□□ 1.82
CDKN3-204ENST00000442975 GGA3Q9NZ52 723 aa26.39■■□□□ 1.82
CDKN3-204ENST00000442975 MROH5Q6ZUA9 1318 aa26.39■■□□□ 1.81
CDKN3-204ENST00000442975 MYO3BQ8WXR4 1341 aa26.39■■□□□ 1.81
CDKN3-204ENST00000442975 IPO8O15397 1037 aaKnown RBP26.38■■□□□ 1.81
CDKN3-204ENST00000442975 CELF2O95319 508 aaKnown RBP26.38■■□□□ 1.81
CDKN3-204ENST00000442975 LRRC24Q50LG9 513 aa26.38■■□□□ 1.81
CDKN3-204ENST00000442975 TTLL5Q6EMB2 1281 aa26.38■■□□□ 1.81
CDKN3-204ENST00000442975 C15orf52Q6ZUT6 534 aaKnown RBP26.38■■□□□ 1.81
CDKN3-204ENST00000442975 KRT26Q7Z3Y9 468 aa26.38■■□□□ 1.81
CDKN3-204ENST00000442975 USP48Q86UV5 1035 aa26.38■■□□□ 1.81
CDKN3-204ENST00000442975 ARHGAP45Q92619 1136 aa26.38■■□□□ 1.81
CDKN3-204ENST00000442975 MYOZ2Q9NPC6 264 aa26.38■■□□□ 1.81
CDKN3-204ENST00000442975 DCPSQ96C86 337 aaKnown RBP26.37■■□□□ 1.81
CDKN3-204ENST00000442975 MEIS3Q99687 375 aa26.37■■□□□ 1.81
CDKN3-204ENST00000442975 ASTN2O75129 1339 aaPredicted RBP26.37■■□□□ 1.81
CDKN3-204ENST00000442975 ADM5C9JUS6 153 aa26.36■■□□□ 1.81
CDKN3-204ENST00000442975 TRIM27P14373 513 aa26.36■■□□□ 1.81
CDKN3-204ENST00000442975 PAXIP1Q6ZW49 1069 aaPredicted RBP26.36■■□□□ 1.81
CDKN3-204ENST00000442975 OGFOD1Q8N543 542 aa26.36■■□□□ 1.81
CDKN3-204ENST00000442975 RIPOR2Q9Y4F9 1068 aa26.36■■□□□ 1.81
CDKN3-204ENST00000442975 LRRFIP2Q9Y608 721 aaKnown RBP26.36■■□□□ 1.81
CDKN3-204ENST00000442975 CST9Q5W186 159 aa26.35■■□□□ 1.81
CDKN3-204ENST00000442975 ATF7IPQ6VMQ6 1270 aa26.35■■□□□ 1.81
CDKN3-204ENST00000442975 TNNQ9UQP3 1299 aa26.35■■□□□ 1.81
CDKN3-204ENST00000442975 JAG2Q9Y219 1238 aa26.35■■□□□ 1.81
CDKN3-204ENST00000442975 A0A1B0GUL6 1792 aa26.35■■□□□ 1.81
CDKN3-204ENST00000442975 UBE4AQ14139 1066 aa26.34■■□□□ 1.81
CDKN3-204ENST00000442975 SCARF1Q14162 830 aa26.34■■□□□ 1.81
CDKN3-204ENST00000442975 DLK2Q6UY11 383 aa26.34■■□□□ 1.81
CDKN3-204ENST00000442975 KIAA0825Q8IV33 1275 aa26.34■■□□□ 1.81
CDKN3-204ENST00000442975 CLUAP1Q96AJ1 413 aa26.34■■□□□ 1.81
CDKN3-204ENST00000442975 RASSF10A6NK89 507 aa26.33■■□□□ 1.81
CDKN3-204ENST00000442975 GYG1P46976 350 aa26.33■■□□□ 1.81
CDKN3-204ENST00000442975 VEGFBP49765 207 aa26.33■■□□□ 1.81
CDKN3-204ENST00000442975 ANGEL2Q5VTE6 544 aaKnown RBP26.33■■□□□ 1.81
CDKN3-204ENST00000442975 INTS3Q68E01 1043 aaKnown RBP26.33■■□□□ 1.81
CDKN3-204ENST00000442975 SULF1Q8IWU6 871 aa26.33■■□□□ 1.81
CDKN3-204ENST00000442975 HDAC5Q9UQL6 1122 aa26.33■■□□□ 1.81
CDKN3-204ENST00000442975 PCNTO95613 3336 aa26.33■■□□□ 1.81
CDKN3-204ENST00000442975 PSME4Q14997 1843 aa26.32■■□□□ 1.8
CDKN3-204ENST00000442975 IL1R1P14778 569 aa26.32■■□□□ 1.8
CDKN3-204ENST00000442975 GRM1Q13255 1194 aa26.32■■□□□ 1.8
CDKN3-204ENST00000442975 DEFB115Q30KQ5 88 aa26.32■■□□□ 1.8
CDKN3-204ENST00000442975 RFX5P48382 616 aaPredicted RBP26.31■■□□□ 1.8
CDKN3-204ENST00000442975 ZKSCAN2Q63HK3 967 aa26.31■■□□□ 1.8
CDKN3-204ENST00000442975 SIL1Q9H173 461 aa26.31■■□□□ 1.8
CDKN3-204ENST00000442975 SASH1O94885 1247 aa26.3■■□□□ 1.8
CDKN3-204ENST00000442975 GNAI3P08754 354 aa26.3■■□□□ 1.8
CDKN3-204ENST00000442975 HIBADHP31937 336 aaKnown RBP26.3■■□□□ 1.8
CDKN3-204ENST00000442975 VPS37DQ86XT2 251 aa26.3■■□□□ 1.8
CDKN3-204ENST00000442975 HDAC9Q9UKV0 1011 aa26.3■■□□□ 1.8
CDKN3-204ENST00000442975 TLL2Q9Y6L7 1015 aa26.3■■□□□ 1.8
CDKN3-204ENST00000442975 F8W031 263 aaPredicted RBP26.29■■□□□ 1.8
CDKN3-204ENST00000442975 EYA2O00167 538 aa26.29■■□□□ 1.8
CDKN3-204ENST00000442975 PDE8BO95263 885 aa26.29■■□□□ 1.8
CDKN3-204ENST00000442975 HSPA1AP0DMV8 641 aaKnown RBP26.29■■□□□ 1.8
CDKN3-204ENST00000442975 HSPA1BP0DMV9 641 aaKnown RBP26.29■■□□□ 1.8
CDKN3-204ENST00000442975 PTPN12Q05209 780 aaKnown RBP26.29■■□□□ 1.8
CDKN3-204ENST00000442975 CERS5Q8N5B7 392 aa26.29■■□□□ 1.8
CDKN3-204ENST00000442975 VGLL2Q8N8G2 317 aa26.29■■□□□ 1.8
CDKN3-204ENST00000442975 PUM3Q15397 648 aaKnown RBP26.28■■□□□ 1.8
CDKN3-204ENST00000442975 NBPF9Q3BBW0 867 aa26.28■■□□□ 1.8
CDKN3-204ENST00000442975 FTSJ3Q8IY81 847 aaKnown RBP26.27■■□□□ 1.8
CDKN3-204ENST00000442975 FAM84BQ96KN1 310 aaPredicted RBP26.27■■□□□ 1.8
CDKN3-204ENST00000442975 SCAF8Q9UPN6 1271 aaKnown RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms