RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 USP17L4A6NCW7 530 aa27.85■■■□□ 2.05
HDLBP-220ENST00000442730 TMEM88BA6NKF7 163 aa27.85■■■□□ 2.05
HDLBP-220ENST00000442730 SNAP23O00161 211 aa27.85■■■□□ 2.05
HDLBP-220ENST00000442730 EGFRP00533 1210 aa27.85■■■□□ 2.05
HDLBP-220ENST00000442730 USP17L1Q7RTZ2 530 aa27.85■■■□□ 2.05
HDLBP-220ENST00000442730 SAMD7Q7Z3H4 446 aa27.85■■■□□ 2.05
HDLBP-220ENST00000442730 JMYQ8N9B5 988 aa27.85■■■□□ 2.05
HDLBP-220ENST00000442730 CNNM1Q9NRU3 951 aa27.85■■■□□ 2.05
HDLBP-220ENST00000442730 AGBL3Q8NEM8 1001 aa27.84■■■□□ 2.05
HDLBP-220ENST00000442730 TRAF5O00463 557 aa27.83■■■□□ 2.05
HDLBP-220ENST00000442730 FMR1Q06787 632 aaKnown RBP eCLIP27.83■■■□□ 2.055e-9■■■□□ 14.7
HDLBP-220ENST00000442730 TBC1D10BQ4KMP7 808 aaPredicted RBP27.83■■■□□ 2.05
HDLBP-220ENST00000442730 GMLQ99445 158 aa27.83■■■□□ 2.05
HDLBP-220ENST00000442730 DACT2Q5SW24 774 aa27.82■■■□□ 2.04
HDLBP-220ENST00000442730 C15orf52Q6ZUT6 534 aaKnown RBP27.82■■■□□ 2.04
HDLBP-220ENST00000442730 PCNTO95613 3336 aa27.81■■■□□ 2.04
HDLBP-220ENST00000442730 ZNF280AP59817 542 aaPredicted RBP27.81■■■□□ 2.04
HDLBP-220ENST00000442730 ARHGAP45Q92619 1136 aa27.81■■■□□ 2.04
HDLBP-220ENST00000442730 PUS3Q9BZE2 481 aaKnown RBP27.81■■■□□ 2.04
HDLBP-220ENST00000442730 ZBED9Q6R2W3 1325 aa27.81■■■□□ 2.04
HDLBP-220ENST00000442730 CNTNAP1P78357 1384 aa27.81■■■□□ 2.04
HDLBP-220ENST00000442730 KIF4BQ2VIQ3 1234 aa27.8■■■□□ 2.04
HDLBP-220ENST00000442730 GLIS2Q9BZE0 524 aaPredicted RBP27.8■■■□□ 2.04
HDLBP-220ENST00000442730 MKRN1Q9UHC7 482 aaKnown RBP27.8■■■□□ 2.04
HDLBP-220ENST00000442730 STRIP1Q5VSL9 837 aa27.79■■■□□ 2.04
HDLBP-220ENST00000442730 MXD3Q9BW11 206 aa27.79■■■□□ 2.04
HDLBP-220ENST00000442730 USP17L8P0C7I0 530 aa27.78■■■□□ 2.04
HDLBP-220ENST00000442730 RBM26Q5T8P6 1007 aaKnown RBP27.78■■■□□ 2.04
HDLBP-220ENST00000442730 RIPOR2Q9Y4F9 1068 aa27.78■■■□□ 2.04
HDLBP-220ENST00000442730 PLIN1O60240 522 aa27.77■■■□□ 2.04
HDLBP-220ENST00000442730 BCAR3O75815 825 aa27.77■■■□□ 2.04
HDLBP-220ENST00000442730 UBTFL1P0CB47 393 aaPredicted RBP27.77■■■□□ 2.04
HDLBP-220ENST00000442730 FBXW7Q969H0 707 aa27.77■■■□□ 2.04
HDLBP-220ENST00000442730 CD209Q9NNX6 404 aa27.77■■■□□ 2.04
HDLBP-220ENST00000442730 MROH5Q6ZUA9 1318 aa27.76■■■□□ 2.03
HDLBP-220ENST00000442730 MYO3BQ8WXR4 1341 aa27.76■■■□□ 2.03
HDLBP-220ENST00000442730 CST9Q5W186 159 aa27.76■■■□□ 2.03
HDLBP-220ENST00000442730 TRPM7Q96QT4 1865 aa27.76■■■□□ 2.03
HDLBP-220ENST00000442730 TRIM27P14373 513 aa27.75■■■□□ 2.03
HDLBP-220ENST00000442730 INTS3Q68E01 1043 aaKnown RBP27.75■■■□□ 2.03
HDLBP-220ENST00000442730 CDC37L1Q7L3B6 337 aa27.75■■■□□ 2.03
HDLBP-220ENST00000442730 ZNF804AQ7Z570 1209 aa27.75■■■□□ 2.03
HDLBP-220ENST00000442730 KLHDC4Q8TBB5 520 aa27.75■■■□□ 2.03
HDLBP-220ENST00000442730 RASSF10A6NK89 507 aa27.74■■■□□ 2.03
HDLBP-220ENST00000442730 LRRC24Q50LG9 513 aa27.74■■■□□ 2.03
HDLBP-220ENST00000442730 MYOZ2Q9NPC6 264 aa27.74■■■□□ 2.03
HDLBP-220ENST00000442730 ABT1Q9ULW3 272 aaKnown RBP27.74■■■□□ 2.03
HDLBP-220ENST00000442730 ASTN2O75129 1339 aaPredicted RBP27.73■■■□□ 2.03
HDLBP-220ENST00000442730 IPO8O15397 1037 aaKnown RBP27.73■■■□□ 2.03
HDLBP-220ENST00000442730 IL1R1P14778 569 aa27.73■■■□□ 2.03
HDLBP-220ENST00000442730 RFX5P48382 616 aaPredicted RBP27.73■■■□□ 2.03
HDLBP-220ENST00000442730 GTF2IP78347 998 aa27.73■■■□□ 2.03
HDLBP-220ENST00000442730 UBE4AQ14139 1066 aa27.73■■■□□ 2.03
HDLBP-220ENST00000442730 TTLL5Q6EMB2 1281 aa27.73■■■□□ 2.03
HDLBP-220ENST00000442730 MEIS3Q99687 375 aa27.73■■■□□ 2.03
HDLBP-220ENST00000442730 GGA3Q9NZ52 723 aa27.73■■■□□ 2.03
HDLBP-220ENST00000442730 ATF7IPQ6VMQ6 1270 aa27.72■■■□□ 2.03
HDLBP-220ENST00000442730 KRT26Q7Z3Y9 468 aa27.72■■■□□ 2.03
HDLBP-220ENST00000442730 USP48Q86UV5 1035 aa27.72■■■□□ 2.03
HDLBP-220ENST00000442730 VGLL2Q8N8G2 317 aa27.72■■■□□ 2.03
HDLBP-220ENST00000442730 FRAT1Q92837 279 aaPredicted RBP27.72■■■□□ 2.03
HDLBP-220ENST00000442730 TNNQ9UQP3 1299 aa27.72■■■□□ 2.03
HDLBP-220ENST00000442730 LRRFIP2Q9Y608 721 aaKnown RBP27.72■■■□□ 2.03
HDLBP-220ENST00000442730 CELF2O95319 508 aaKnown RBP27.71■■■□□ 2.03
HDLBP-220ENST00000442730 ADM5C9JUS6 153 aa27.7■■■□□ 2.02
HDLBP-220ENST00000442730 SCARF1Q14162 830 aa27.7■■■□□ 2.02
HDLBP-220ENST00000442730 METTL24Q5JXM2 366 aa27.7■■■□□ 2.02
HDLBP-220ENST00000442730 DLK2Q6UY11 383 aa27.7■■■□□ 2.02
HDLBP-220ENST00000442730 DCPSQ96C86 337 aaKnown RBP27.7■■■□□ 2.02
HDLBP-220ENST00000442730 VEGFBP49765 207 aa27.69■■■□□ 2.02
HDLBP-220ENST00000442730 CERS5Q8N5B7 392 aa27.69■■■□□ 2.02
HDLBP-220ENST00000442730 TLL2Q9Y6L7 1015 aa27.69■■■□□ 2.02
HDLBP-220ENST00000442730 GYG1P46976 350 aa27.68■■■□□ 2.02
HDLBP-220ENST00000442730 PTPN12Q05209 780 aaKnown RBP27.68■■■□□ 2.02
HDLBP-220ENST00000442730 ANGEL2Q5VTE6 544 aaKnown RBP27.68■■■□□ 2.02
HDLBP-220ENST00000442730 OGFOD1Q8N543 542 aa27.68■■■□□ 2.02
HDLBP-220ENST00000442730 ZNF408Q9H9D4 720 aa27.68■■■□□ 2.02
HDLBP-220ENST00000442730 HDAC5Q9UQL6 1122 aa27.68■■■□□ 2.02
HDLBP-220ENST00000442730 PDE8BO95263 885 aa27.67■■■□□ 2.02
HDLBP-220ENST00000442730 DEFB115Q30KQ5 88 aa27.67■■■□□ 2.02
HDLBP-220ENST00000442730 KIAA0825Q8IV33 1275 aa27.67■■■□□ 2.02
HDLBP-220ENST00000442730 FAM84BQ96KN1 310 aaPredicted RBP27.67■■■□□ 2.02
HDLBP-220ENST00000442730 EYA2O00167 538 aa27.66■■■□□ 2.02
HDLBP-220ENST00000442730 MMP14P50281 582 aa27.66■■■□□ 2.02
HDLBP-220ENST00000442730 SULF1Q8IWU6 871 aa27.66■■■□□ 2.02
HDLBP-220ENST00000442730 CLUAP1Q96AJ1 413 aa27.66■■■□□ 2.02
HDLBP-220ENST00000442730 GNAI3P08754 354 aa27.65■■■□□ 2.02
HDLBP-220ENST00000442730 HIBADHP31937 336 aaKnown RBP27.65■■■□□ 2.02
HDLBP-220ENST00000442730 NBPF9Q3BBW0 867 aa27.65■■■□□ 2.02
HDLBP-220ENST00000442730 ZKSCAN2Q63HK3 967 aa27.65■■■□□ 2.02
HDLBP-220ENST00000442730 SAPCD2Q86UD0 394 aa27.65■■■□□ 2.02
HDLBP-220ENST00000442730 TDRD7Q8NHU6 1098 aaKnown RBP27.65■■■□□ 2.02
HDLBP-220ENST00000442730 JAG2Q9Y219 1238 aa27.65■■■□□ 2.02
HDLBP-220ENST00000442730 THSD7BQ9C0I4 1608 aa27.65■■■□□ 2.02
HDLBP-220ENST00000442730 PITPNM2Q9BZ72 1349 aa27.65■■■□□ 2.02
HDLBP-220ENST00000442730 ATG9AQ7Z3C6 839 aa27.64■■■□□ 2.02
HDLBP-220ENST00000442730 FAM205AQ6ZU69 1335 aa27.64■■■□□ 2.01
HDLBP-220ENST00000442730 SASH1O94885 1247 aa27.63■■■□□ 2.01
HDLBP-220ENST00000442730 FKBP1AP62942 108 aaKnown RBP27.63■■■□□ 2.01
HDLBP-220ENST00000442730 PUM3Q15397 648 aaKnown RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms