RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 CNKSR2Q8WXI2 1034 aa8.91□□□□□ -0.98
CDC42BPA-208ENST00000442054 ATP6V0A2Q9Y487 856 aa8.91□□□□□ -0.98
CDC42BPA-208ENST00000442054 OTUD7AQ8TE49 926 aaPredicted RBP8.91□□□□□ -0.98
CDC42BPA-208ENST00000442054 UPF2Q9HAU5 1272 aaKnown RBP8.91□□□□□ -0.98
CDC42BPA-208ENST00000442054 HIBADHP31937 336 aaKnown RBP8.91□□□□□ -0.98
CDC42BPA-208ENST00000442054 RGPD5Q99666 1765 aa8.91□□□□□ -0.98
CDC42BPA-208ENST00000442054 NTSR2O95665 410 aa8.9□□□□□ -0.98
CDC42BPA-208ENST00000442054 ZDHHC9Q9Y397 364 aa8.9□□□□□ -0.98
CDC42BPA-208ENST00000442054 ATP2B3Q16720 1220 aa8.9□□□□□ -0.98
CDC42BPA-208ENST00000442054 SMC1BQ8NDV3 1235 aa8.9□□□□□ -0.98
CDC42BPA-208ENST00000442054 EPHX2P34913 555 aa8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 ISCA1Q9BUE6 129 aa8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 ZNF804BA4D1E1 1349 aa8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 K7ELQ4 463 aaPredicted RBP8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 L1TD1Q5T7N2 865 aaKnown RBP8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 SLF2Q8IX21 1173 aa8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 BICC1Q9H694 974 aaKnown RBP8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 TOMM22Q9NS69 142 aa8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 LEMD3Q9Y2U8 911 aa8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 TOMM70O94826 608 aa8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 APPP05067 770 aa8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 CLCN1P35523 988 aa8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 TNNI2P48788 182 aa8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 ANKRD45Q5TZF3 282 aa8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 CNOT7Q9UIV1 285 aaKnown RBP8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 UBN2Q6ZU65 1347 aa8.89□□□□□ -0.99
CDC42BPA-208ENST00000442054 GLTPD2A6NH11 291 aa8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 CHRNDQ07001 517 aa8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 MAP1SQ66K74 1059 aaPredicted RBP8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 DNAJC2Q99543 621 aaKnown RBP8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 ZBTB12Q9Y330 459 aaPredicted RBP8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 PARP4Q9UKK3 1724 aaKnown RBP8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 ECE2O60344 883 aa8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 IDH1O75874 414 aaKnown RBP8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 USP17L8P0C7I0 530 aa8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 TRIM28Q13263 835 aaKnown RBP8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 C2orf69Q8N8R5 385 aa8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 TTLL11Q8NHH1 800 aa8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 USP17L3A6NCW0 530 aa8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 USP17L4A6NCW7 530 aa8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 ECM2O94769 699 aaPredicted RBP8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 NBPF7P0C2Y1 421 aaPredicted RBP8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 USP17L1Q7RTZ2 530 aa8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 KRT26Q7Z3Y9 468 aa8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 ERC1Q8IUD2 1116 aa8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 SPRYD3Q8NCJ5 442 aa8.88□□□□□ -0.99
CDC42BPA-208ENST00000442054 DDX11L8A8MPP1 907 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 CDC45O75419 566 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 GMPSP49915 693 aaPredicted RBP8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 MFSD14BQ5SR56 506 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 KLHDC4Q8TBB5 520 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 SUCLG2Q96I99 432 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 MEIS3Q99687 375 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 MKRN1Q9UHC7 482 aaKnown RBP8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 TRIM6-TRIM34B2RNG4 842 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 PPP1R12BO60237 982 aaPredicted RBP8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 LDHCP07864 332 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 IL15P40933 162 aaPredicted RBP8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 GPSM2P81274 684 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 LRRFIP1Q32MZ4 808 aaKnown RBP8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 MICALL2Q8IY33 904 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 PPP1R9BQ96SB3 815 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 TTF2Q9UNY4 1162 aaKnown RBP8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 CTDP1Q9Y5B0 961 aaPredicted RBP8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 BRWD3Q6RI45 1802 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 SDSP20132 328 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 MRE11P49959 708 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 PDIA6Q15084 440 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 SF3B3Q15393 1217 aaKnown RBP8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 PODNQ7Z5L7 613 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 RPAP2Q8IXW5 612 aaPredicted RBP8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 CRACR2BQ8N4Y2 399 aaPredicted RBP8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 GRPEL1Q9HAV7 217 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 FOXD4L1Q9NU39 408 aa8.87□□□□□ -0.99
CDC42BPA-208ENST00000442054 SCNN1DP51172 638 aa8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 SPTY2D1Q68D10 685 aaPredicted RBP8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 HSCBQ8IWL3 235 aa8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 SNRKQ9NRH2 765 aa8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 PA2G4Q9UQ80 394 aaKnown RBP8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 GYG1P46976 350 aa8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 PKP1Q13835 747 aa8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 AACSQ86V21 672 aa8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 IL1RAPL2Q9NP60 686 aa8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 BSDC1Q9NW68 430 aaPredicted RBP8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 NRAPQ86VF7 1730 aa8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 GOLGA6L3A6NEY3 463 aa8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 EYA2O00167 538 aa8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 IGKV5-2P06315 115 aa8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 BEND3Q5T5X7 828 aa8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 LMBRD1Q9NUN5 540 aa8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 EXOC6BQ9Y2D4 811 aa8.86□□□□□ -0.99
CDC42BPA-208ENST00000442054 ZGPATQ8N5A5 531 aaKnown RBP8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 TBC1D16Q8TBP0 767 aa8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 COA1Q9GZY4 146 aa8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 MINPP1Q9UNW1 487 aa8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 TCHHQ07283 1943 aa8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 THSD7AQ9UPZ6 1657 aa8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 CLRN2A0PK11 232 aa8.85□□□□□ -0.99
CDC42BPA-208ENST00000442054 RGL2O15211 777 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms