RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 CDK2AP1O14519 115 aa7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 SH3BP2P78314 561 aa7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 VARS2Q5ST30 1063 aaKnown RBP7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 C1orf131Q8NDD1 294 aaKnown RBP7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 NOC4LQ9BVI4 516 aaKnown RBP7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 GINM1Q9NU53 330 aa7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 HCN4Q9Y3Q4 1203 aa7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 URB2Q14146 1524 aaKnown RBP7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 EML1O00423 815 aa7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 BCAMP50895 628 aa7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 HIRAP54198 1017 aaPredicted RBP7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 EVA1CP58658 441 aa7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 CALD1Q05682 793 aaKnown RBP7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 CC2D1BQ5T0F9 858 aaKnown RBP7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 USPL1Q5W0Q7 1092 aa7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 NXPE4Q6UWF7 544 aa7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 FERMT3Q86UX7 667 aa7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 ATL2Q8NHH9 583 aa7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 CEP89Q96ST8 783 aa7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 RSRP1Q9BUV0 290 aa7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 KANSL2Q9H9L4 492 aa7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 SCUBE2Q9NQ36 999 aa7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 TMPRSS4Q9NRS4 437 aa7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 ADAMTS1Q9UHI8 967 aa7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 TCEAL9Q9UHQ7 104 aa7.21□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 TIAM1Q13009 1591 aa7.21□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 ESYT3A0FGR9 886 aa7.21□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 TLL1O43897 1013 aa7.21□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 WNT7BP56706 349 aa7.21□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 KIAA0907Q7Z7F0 614 aaPredicted RBP7.21□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 RELL1Q8IUW5 271 aa7.21□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 TRPM4Q8TD43 1214 aa7.21□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 ANAPC16Q96DE5 110 aa7.21□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 DNAJC7Q99615 494 aa7.21□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 INO80BQ9C086 356 aaPredicted RBP7.21□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 RAB6BQ9NRW1 208 aa7.21□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 MAP4K5Q9Y4K4 846 aa7.21□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 CCNB3Q8WWL7 1395 aa7.2□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 MINDY4BA8MYZ0 360 aa7.2□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 TK2O00142 265 aa7.2□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 PRC1O43663 620 aa7.2□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 EIF4A3P38919 411 aaKnown RBP7.2□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 SOX9P48436 509 aa7.2□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 SH3PXD2AQ5TCZ1 1133 aa7.2□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 EGFL6Q8IUX8 553 aa7.2□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 NBPF15Q8N660 670 aa7.2□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 IPO9Q96P70 1041 aaKnown RBP7.2□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 PRKAG3Q9UGI9 489 aa7.2□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 USP3Q9Y6I4 520 aa7.2□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 WDR97A6NE52 1622 aa7.2□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 CTTNBP2Q8WZ74 1663 aa7.2□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 TNFRSF21O75509 655 aa7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 POTEJP0CG39 1038 aa7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 DHX9Q08211 1270 aaKnown RBP7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 IFRD2Q12894 506 aaPredicted RBP7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 COL9A2Q14055 689 aaPredicted RBP7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 TLR1Q15399 786 aa7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 PCGF5Q86SE9 256 aa7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 LILRB2Q8N423 598 aa7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 BCO2Q9BYV7 579 aa7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 SLC6A16Q9GZN6 736 aa7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 FOXD3Q9UJU5 478 aaPredicted RBP7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 CENPJQ9HC77 1338 aaPredicted RBP7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 EFCAB5A4FU69 1503 aa7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 GBP2P32456 591 aaPredicted RBP7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 TEAD4Q15561 434 aa7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 ZNF784Q8NCA9 323 aaPredicted RBP7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 EAF1Q96JC9 268 aaPredicted RBP7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 IER2Q9BTL4 223 aa7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 RSPH9Q9H1X1 276 aaPredicted RBP7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 GEMIN8Q9NWZ8 242 aaKnown RBP7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 TTF2Q9UNY4 1162 aaKnown RBP7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 CTDP1Q9Y5B0 961 aaPredicted RBP7.19□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 MASP1P48740 699 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 CBLBQ13191 982 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 SAFB2Q14151 953 aaKnown RBP eCLIP7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 SNX29Q8TEQ0 813 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 L3MBTL2Q969R5 705 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 CCDC113Q9H0I3 377 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 NPHS2Q9NP85 383 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 CABP1Q9NZU7 370 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 SFMBT1Q9UHJ3 866 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 PRDM4Q9UKN5 801 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 PDZRN3Q9UPQ7 1066 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 SCINQ9Y6U3 715 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 KIF21AQ7Z4S6 1674 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 LRRC9Q6ZRR7 1453 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 F6X3S4 739 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 HCLS1P14317 486 aaPredicted RBP7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 ANP32AP39687 249 aaKnown RBP7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 C16orf86Q6ZW13 317 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 ZNF296Q8WUU4 475 aaPredicted RBP7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 SNRNP27Q8WVK2 155 aaKnown RBP7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 FEZ1Q99689 392 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 PHACTR1Q9C0D0 580 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 HOMER2Q9NSB8 354 aa7.18□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 ABCA5Q8WWZ7 1642 aa7.17□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 GAPVD1Q14C86 1478 aa7.17□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 TDRD9Q8NDG6 1382 aaKnown RBP7.17□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 GADD45BO75293 160 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms