RNA–Protein interactions for RNA: ENST00000440919.1

SATB2-204, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best)

Gene SATB2, Length 2,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-204ENST00000440919 ABCA3Q99758 1704 aa20.72■□□□□ 0.91
SATB2-204ENST00000440919 CHAF1AQ13111 956 aaPredicted RBP20.71■□□□□ 0.91
SATB2-204ENST00000440919 NEUROD6Q96NK8 337 aa20.71■□□□□ 0.91
SATB2-204ENST00000440919 SALL1Q9NSC2 1324 aa20.71■□□□□ 0.91
SATB2-204ENST00000440919 NBPF26B4DH59 902 aa20.7■□□□□ 0.91
SATB2-204ENST00000440919 CEBPZQ03701 1054 aaKnown RBP20.7■□□□□ 0.91
SATB2-204ENST00000440919 LRMPQ12912 555 aa20.7■□□□□ 0.91
SATB2-204ENST00000440919 NBPF14Q5TI25 921 aa20.7■□□□□ 0.91
SATB2-204ENST00000440919 NBPF10Q6P3W6 841 aaKnown RBP20.7■□□□□ 0.91
SATB2-204ENST00000440919 DRC7Q8IY82 874 aa20.7■□□□□ 0.91
SATB2-204ENST00000440919 NBPF15Q8N660 670 aa20.7■□□□□ 0.91
SATB2-204ENST00000440919 COL5A2P05997 1499 aaPredicted RBP20.7■□□□□ 0.91
SATB2-204ENST00000440919 RIOK3O14730 519 aaKnown RBP20.7■□□□□ 0.9
SATB2-204ENST00000440919 TIMM10P62072 90 aa20.7■□□□□ 0.9
SATB2-204ENST00000440919 ARID3AQ99856 593 aa20.7■□□□□ 0.9
SATB2-204ENST00000440919 CCDC94Q9BW85 323 aaPredicted RBP20.7■□□□□ 0.9
SATB2-204ENST00000440919 FTOQ9C0B1 505 aaKnown RBP eCLIP20.7■□□□□ 0.9
SATB2-204ENST00000440919 SPEF2Q9C093 1822 aa20.7■□□□□ 0.9
SATB2-204ENST00000440919 E7EWF7 191 aa20.69■□□□□ 0.9
SATB2-204ENST00000440919 HSPD1P10809 573 aaKnown RBP20.69■□□□□ 0.9
SATB2-204ENST00000440919 ZSCAN25Q6NSZ9 544 aa20.69■□□□□ 0.9
SATB2-204ENST00000440919 BCL2L12Q9HB09 334 aa20.69■□□□□ 0.9
SATB2-204ENST00000440919 A0A0G2JLW4 131 aa20.69■□□□□ 0.9
SATB2-204ENST00000440919 IL15P40933 162 aaPredicted RBP20.69■□□□□ 0.9
SATB2-204ENST00000440919 IQCB1Q15051 598 aa20.69■□□□□ 0.9
SATB2-204ENST00000440919 MAST3O60307 1309 aa20.69■□□□□ 0.9
SATB2-204ENST00000440919 FAM177BA6PVY3 158 aa20.68■□□□□ 0.9
SATB2-204ENST00000440919 CTAGE5O15320 804 aa20.68■□□□□ 0.9
SATB2-204ENST00000440919 CDC25BP30305 580 aa20.68■□□□□ 0.9
SATB2-204ENST00000440919 FOSBP53539 338 aa20.68■□□□□ 0.9
SATB2-204ENST00000440919 CCT2P78371 535 aaKnown RBP20.68■□□□□ 0.9
SATB2-204ENST00000440919 CCAR1Q8IX12 1150 aaKnown RBP20.68■□□□□ 0.9
SATB2-204ENST00000440919 USP28Q96RU2 1077 aa20.68■□□□□ 0.9
SATB2-204ENST00000440919 GOLPH3LQ9H4A5 285 aa20.68■□□□□ 0.9
SATB2-204ENST00000440919 CWC25Q9NXE8 425 aaPredicted RBP20.68■□□□□ 0.9
SATB2-204ENST00000440919 SNW1Q13573 536 aaKnown RBP20.68■□□□□ 0.9
SATB2-204ENST00000440919 ATL3Q6DD88 541 aa20.68■□□□□ 0.9
SATB2-204ENST00000440919 CLIP2Q9UDT6 1046 aa20.68■□□□□ 0.9
SATB2-204ENST00000440919 SARM1Q6SZW1 724 aa20.67■□□□□ 0.9
SATB2-204ENST00000440919 TTLL7Q6ZT98 887 aa20.67■□□□□ 0.9
SATB2-204ENST00000440919 C11orf57Q6ZUT1 292 aaPredicted RBP20.67■□□□□ 0.9
SATB2-204ENST00000440919 CARD10Q9BWT7 1032 aa20.67■□□□□ 0.9
SATB2-204ENST00000440919 NCOA5Q9HCD5 579 aaKnown RBP20.67■□□□□ 0.9
SATB2-204ENST00000440919 UBR2Q8IWV8 1755 aa20.67■□□□□ 0.9
SATB2-204ENST00000440919 PDIA3P30101 505 aaKnown RBP20.66■□□□□ 0.9
SATB2-204ENST00000440919 EVA1CP58658 441 aa20.66■□□□□ 0.9
SATB2-204ENST00000440919 STX1AQ16623 288 aa20.66■□□□□ 0.9
SATB2-204ENST00000440919 LRRC24Q50LG9 513 aa20.66■□□□□ 0.9
SATB2-204ENST00000440919 ZNF274Q96GC6 653 aaPredicted RBP20.66■□□□□ 0.9
SATB2-204ENST00000440919 EYA2O00167 538 aa20.66■□□□□ 0.9
SATB2-204ENST00000440919 RNF113AO15541 343 aaKnown RBP20.66■□□□□ 0.9
SATB2-204ENST00000440919 IFIT1P09914 478 aaKnown RBP20.66■□□□□ 0.9
SATB2-204ENST00000440919 ZCRB1Q8TBF4 217 aaKnown RBP20.66■□□□□ 0.9
SATB2-204ENST00000440919 CTIFO43310 598 aaKnown RBP20.65■□□□□ 0.9
SATB2-204ENST00000440919 CCDC144BQ3MJ40 725 aa20.65■□□□□ 0.9
SATB2-204ENST00000440919 ILDR1Q86SU0 546 aaPredicted RBP20.65■□□□□ 0.9
SATB2-204ENST00000440919 CCDC144CPQ8IYA2 1237 aa20.65■□□□□ 0.9
SATB2-204ENST00000440919 ENGASEQ8NFI3 743 aa20.65■□□□□ 0.9
SATB2-204ENST00000440919 ZNF396Q96N95 335 aaPredicted RBP20.65■□□□□ 0.9
SATB2-204ENST00000440919 A0A1B0GUL7 405 aa20.65■□□□□ 0.9
SATB2-204ENST00000440919 CCDC73Q6ZRK6 1079 aa20.65■□□□□ 0.9
SATB2-204ENST00000440919 CACTINQ8WUQ7 758 aaKnown RBP20.65■□□□□ 0.9
SATB2-204ENST00000440919 PCDH11XQ9BZA7 1347 aa20.65■□□□□ 0.9
SATB2-204ENST00000440919 PCDH11YQ9BZA8 1340 aa20.65■□□□□ 0.9
SATB2-204ENST00000440919 CARMIL3Q8ND23 1372 aa20.64■□□□□ 0.9
SATB2-204ENST00000440919 GOLGA6L19H0YKK7 550 aa20.64■□□□□ 0.89
SATB2-204ENST00000440919 FAM160A1Q05DH4 1040 aa20.64■□□□□ 0.89
SATB2-204ENST00000440919 FBXL16Q8N461 479 aa20.64■□□□□ 0.89
SATB2-204ENST00000440919 ZNF594Q96JF6 807 aaPredicted RBP20.64■□□□□ 0.89
SATB2-204ENST00000440919 STRN4Q9NRL3 753 aa20.64■□□□□ 0.89
SATB2-204ENST00000440919 M0R2C6 588 aa20.63■□□□□ 0.89
SATB2-204ENST00000440919 CIAO1O76071 339 aa20.63■□□□□ 0.89
SATB2-204ENST00000440919 IL2RBP14784 551 aa20.63■□□□□ 0.89
SATB2-204ENST00000440919 CHST3Q7LGC8 479 aa20.63■□□□□ 0.89
SATB2-204ENST00000440919 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.63■□□□□ 0.89
SATB2-204ENST00000440919 ATG3Q9NT62 314 aa20.63■□□□□ 0.89
SATB2-204ENST00000440919 NWD2Q9ULI1 1742 aa20.63■□□□□ 0.89
SATB2-204ENST00000440919 CCDC191Q8NCU4 936 aa20.63■□□□□ 0.89
SATB2-204ENST00000440919 MRFAP1L1Q96HT8 127 aa20.63■□□□□ 0.89
SATB2-204ENST00000440919 KINO60870 393 aaKnown RBP20.62■□□□□ 0.89
SATB2-204ENST00000440919 PPFIA3O75145 1194 aa20.62■□□□□ 0.89
SATB2-204ENST00000440919 EVCP57679 992 aa20.62■□□□□ 0.89
SATB2-204ENST00000440919 GUCY1B3Q02153 619 aa20.62■□□□□ 0.89
SATB2-204ENST00000440919 TTLL5Q6EMB2 1281 aa20.62■□□□□ 0.89
SATB2-204ENST00000440919 ANKRD7Q92527 254 aa20.62■□□□□ 0.89
SATB2-204ENST00000440919 C16orf45Q96MC5 204 aaPredicted RBP20.62■□□□□ 0.89
SATB2-204ENST00000440919 NAP1L2Q9ULW6 460 aaPredicted RBP20.62■□□□□ 0.89
SATB2-204ENST00000440919 KCPQ6ZWJ8 1503 aa20.62■□□□□ 0.89
SATB2-204ENST00000440919 FDPSP14324 419 aaKnown RBP20.62■□□□□ 0.89
SATB2-204ENST00000440919 OSBP2Q969R2 916 aa20.62■□□□□ 0.89
SATB2-204ENST00000440919 ME1P48163 572 aa20.61■□□□□ 0.89
SATB2-204ENST00000440919 SMAP1Q8IYB5 467 aaPredicted RBP20.61■□□□□ 0.89
SATB2-204ENST00000440919 FSIP1Q8NA03 581 aa20.61■□□□□ 0.89
SATB2-204ENST00000440919 CHMP4CQ96CF2 233 aa20.61■□□□□ 0.89
SATB2-204ENST00000440919 PUS3Q9BZE2 481 aaKnown RBP20.61■□□□□ 0.89
SATB2-204ENST00000440919 PAPPAQ13219 1627 aa20.61■□□□□ 0.89
SATB2-204ENST00000440919 A1BGP04217 495 aa20.61■□□□□ 0.89
SATB2-204ENST00000440919 DHX40Q8IX18 779 aaKnown RBP20.61■□□□□ 0.89
SATB2-204ENST00000440919 ZBTB3Q9H5J0 574 aa20.61■□□□□ 0.89
SATB2-204ENST00000440919 FOXP2O15409 715 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms