RNA–Protein interactions for RNA: ENST00000440111.6

TSC1-203, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,463 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-203ENST00000440111 UBAC1Q9BSL1 405 aa8.56□□□□□ -1.04
TSC1-203ENST00000440111 POLE3Q9NRF9 147 aa8.56□□□□□ -1.04
TSC1-203ENST00000440111 GIMAP4Q9NUV9 329 aa8.56□□□□□ -1.04
TSC1-203ENST00000440111 WDR78Q5VTH9 848 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 CEP120Q8N960 986 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 GOPCQ9HD26 462 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 ZBTB7BO15156 539 aaPredicted RBP8.55□□□□□ -1.04
TSC1-203ENST00000440111 BAG4O95429 457 aaKnown RBP8.55□□□□□ -1.04
TSC1-203ENST00000440111 TNPO1Q92973 898 aaKnown RBP8.55□□□□□ -1.04
TSC1-203ENST00000440111 EPSTI1Q96J88 318 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 CACNA2D3Q8IZS8 1091 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 OTUD6BQ8N6M0 293 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 RNF214Q8ND24 703 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 BANK1Q8NDB2 785 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 SMARCC1Q92922 1105 aaPredicted RBP8.55□□□□□ -1.04
TSC1-203ENST00000440111 VCX3BQ9H321 246 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 ERBB4Q15303 1308 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 LIG1P18858 919 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 HSPA4P34932 840 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 TMED8Q6PL24 325 aaPredicted RBP8.55□□□□□ -1.04
TSC1-203ENST00000440111 TBC1D5Q92609 795 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 DDX19AQ9NUU7 478 aaKnown RBP8.55□□□□□ -1.04
TSC1-203ENST00000440111 CDC42BPGQ6DT37 1551 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 CASQ2O14958 399 aaPredicted RBP8.55□□□□□ -1.04
TSC1-203ENST00000440111 MCM6Q14566 821 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 EVI5LQ96CN4 794 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 KRT83P78385 493 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 TTLL12Q14166 644 aaPredicted RBP8.55□□□□□ -1.04
TSC1-203ENST00000440111 TTC39AQ5SRH9 613 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 PRIMPOLQ96LW4 560 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 MPHOSPH8Q99549 860 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.55□□□□□ -1.04
TSC1-203ENST00000440111 CCDC160A6NGH7 325 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 NUP133Q8WUM0 1156 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 CNNM1Q9NRU3 951 aa8.55□□□□□ -1.04
TSC1-203ENST00000440111 ARHGAP25P42331 645 aa8.54□□□□□ -1.04
TSC1-203ENST00000440111 CCDC183Q5T5S1 534 aa8.54□□□□□ -1.04
TSC1-203ENST00000440111 LIMCH1Q9UPQ0 1083 aa8.54□□□□□ -1.04
TSC1-203ENST00000440111 ERCC5P28715 1186 aaPredicted RBP8.54□□□□□ -1.04
TSC1-203ENST00000440111 IFT74Q96LB3 600 aa8.54□□□□□ -1.04
TSC1-203ENST00000440111 RBM27Q9P2N5 1060 aaKnown RBP8.54□□□□□ -1.04
TSC1-203ENST00000440111 SURF6O75683 361 aaKnown RBP8.54□□□□□ -1.04
TSC1-203ENST00000440111 DNAJC8O75937 253 aaPredicted RBP8.54□□□□□ -1.04
TSC1-203ENST00000440111 TRPC3Q13507 836 aa8.54□□□□□ -1.04
TSC1-203ENST00000440111 NUF2Q9BZD4 464 aa8.54□□□□□ -1.04
TSC1-203ENST00000440111 TACC3Q9Y6A5 838 aa8.54□□□□□ -1.04
TSC1-203ENST00000440111 MXRA7P84157 204 aa8.54□□□□□ -1.04
TSC1-203ENST00000440111 VCX3AQ9NNX9 186 aa8.54□□□□□ -1.04
TSC1-203ENST00000440111 RFC1P35251 1148 aaPredicted RBP8.54□□□□□ -1.04
TSC1-203ENST00000440111 CYB5RLQ6IPT4 315 aa8.54□□□□□ -1.04
TSC1-203ENST00000440111 NAA16Q6N069 864 aaPredicted RBP8.54□□□□□ -1.04
TSC1-203ENST00000440111 BCAP29Q9UHQ4 241 aa8.54□□□□□ -1.04
TSC1-203ENST00000440111 EMILIN1Q9Y6C2 1016 aa8.54□□□□□ -1.04
TSC1-203ENST00000440111 A0A087WZG4 1122 aa8.54□□□□□ -1.04
TSC1-203ENST00000440111 CHMP2AO43633 222 aa8.54□□□□□ -1.04
TSC1-203ENST00000440111 SSBP05455 408 aaKnown RBP eCLIP8.54□□□□□ -1.04
TSC1-203ENST00000440111 PDCD2Q16342 344 aaPredicted RBP8.54□□□□□ -1.04
TSC1-203ENST00000440111 ZNF354CQ86Y25 554 aa8.54□□□□□ -1.04
TSC1-203ENST00000440111 GBP7Q8N8V2 638 aaPredicted RBP8.54□□□□□ -1.04
TSC1-203ENST00000440111 TEX13AQ9BXU3 409 aaPredicted RBP8.54□□□□□ -1.04
TSC1-203ENST00000440111 CCDC178Q5BJE1 867 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 GBP6Q6ZN66 633 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 STX6O43752 255 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 TATP17735 454 aaPredicted RBP8.53□□□□□ -1.04
TSC1-203ENST00000440111 NME9Q86XW9 330 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 EIF2AQ9BY44 585 aaKnown RBP8.53□□□□□ -1.04
TSC1-203ENST00000440111 TM6SF1Q9BZW5 370 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 ECHDC1Q9NTX5 307 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 CRCPO75575 148 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 USP5P45974 858 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 ZNF569Q5MCW4 686 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 IMPG2Q9BZV3 1241 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 PFDN4Q9NQP4 134 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 RFX7Q2KHR2 1363 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 ZNF445P59923 1031 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 CTR9Q6PD62 1173 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 LPXNO60711 386 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 CPLX3Q8WVH0 158 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 HAUS7Q99871 368 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 MYO10Q9HD67 2058 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 PPRC1Q5VV67 1664 aaKnown RBP8.53□□□□□ -1.04
TSC1-203ENST00000440111 MKL2Q9ULH7 1088 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 PHF8Q9UPP1 1060 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 U3KPZ7 1027 aaPredicted RBP8.53□□□□□ -1.04
TSC1-203ENST00000440111 PXDNLA1KZ92 1463 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 DIP2CQ9Y2E4 1556 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 MYO1BO43795 1136 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 PRR16Q569H4 304 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 TMOD4Q9NZQ9 345 aa8.53□□□□□ -1.04
TSC1-203ENST00000440111 MACROD2A1Z1Q3 448 aa8.52□□□□□ -1.04
TSC1-203ENST00000440111 WDR46O15213 610 aaKnown RBP8.52□□□□□ -1.04
TSC1-203ENST00000440111 SLC8A3P57103 927 aa8.52□□□□□ -1.04
TSC1-203ENST00000440111 VGLL3A8MV65 326 aa8.52□□□□□ -1.05
TSC1-203ENST00000440111 RNF8O76064 485 aa8.52□□□□□ -1.05
TSC1-203ENST00000440111 PDE1AP54750 535 aa8.52□□□□□ -1.05
TSC1-203ENST00000440111 RAI14Q9P0K7 980 aa8.52□□□□□ -1.05
TSC1-203ENST00000440111 CAMSAP1Q5T5Y3 1602 aa8.52□□□□□ -1.05
TSC1-203ENST00000440111 ACEP12821 1306 aa8.52□□□□□ -1.05
TSC1-203ENST00000440111 ZNF530Q6P9A1 599 aaPredicted RBP8.52□□□□□ -1.05
TSC1-203ENST00000440111 ELL2O00472 640 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms