RNA–Protein interactions for RNA: ENST00000439079.1

LINC00415-201, long intergenic non-protein coding RNA 415, humanhuman

TSL 3 BASIC

Gene LINC00415, Length 435 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00415-201ENST00000439079 QTRT2Q9H974 415 aaKnown RBP6.06□□□□□ -1.44
LINC00415-201ENST00000439079 PRDM10Q9NQV6 1147 aa6.06□□□□□ -1.44
LINC00415-201ENST00000439079 PCDHGA11Q9Y5H2 935 aa6.06□□□□□ -1.44
LINC00415-201ENST00000439079 DNMT3AQ9Y6K1 912 aaPredicted RBP6.06□□□□□ -1.44
LINC00415-201ENST00000439079 WDHD1O75717 1129 aaPredicted RBP6.05□□□□□ -1.44
LINC00415-201ENST00000439079 RGS20O76081 388 aa6.05□□□□□ -1.44
LINC00415-201ENST00000439079 SCNN1AP37088 669 aa6.05□□□□□ -1.44
LINC00415-201ENST00000439079 RBM6P78332 1123 aaKnown RBP6.05□□□□□ -1.44
LINC00415-201ENST00000439079 SERINC3Q13530 473 aa6.05□□□□□ -1.44
LINC00415-201ENST00000439079 CNGB1Q14028 1251 aaPredicted RBP6.05□□□□□ -1.44
LINC00415-201ENST00000439079 DSC3Q14574 896 aa6.05□□□□□ -1.44
LINC00415-201ENST00000439079 ZRSR2Q15696 482 aaKnown RBP6.05□□□□□ -1.44
LINC00415-201ENST00000439079 VPS72Q15906 364 aa6.05□□□□□ -1.44
LINC00415-201ENST00000439079 ODR4Q5SWX8 454 aa6.05□□□□□ -1.44
LINC00415-201ENST00000439079 HELQQ8TDG4 1101 aa6.05□□□□□ -1.44
LINC00415-201ENST00000439079 STAG1Q8WVM7 1258 aa6.05□□□□□ -1.44
LINC00415-201ENST00000439079 MTA3Q9BTC8 594 aa6.05□□□□□ -1.44
LINC00415-201ENST00000439079 PRR12Q9ULL5 1215 aa6.05□□□□□ -1.44
LINC00415-201ENST00000439079 KIAA1024Q9UPX6 916 aa6.05□□□□□ -1.44
LINC00415-201ENST00000439079 PCDHB11Q9Y5F2 797 aa6.05□□□□□ -1.44
LINC00415-201ENST00000439079 EID1Q9Y6B2 187 aa6.05□□□□□ -1.44
LINC00415-201ENST00000439079 CEP162Q5TB80 1403 aa6.05□□□□□ -1.44
LINC00415-201ENST00000439079 ATAD2Q6PL18 1390 aa6.05□□□□□ -1.44
LINC00415-201ENST00000439079 EHBP1L1Q8N3D4 1523 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 CAND2O75155 1236 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 VARSP26640 1264 aaKnown RBP6.04□□□□□ -1.44
LINC00415-201ENST00000439079 GJA8P48165 433 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 KCNC4Q03721 635 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 PTPN12Q05209 780 aaKnown RBP6.04□□□□□ -1.44
LINC00415-201ENST00000439079 TRIM32Q13049 653 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 IDI1Q13907 227 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 ALKBH2Q6NS38 261 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 BRINP3Q76B58 766 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 PCGF5Q86SE9 256 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 CDAN1Q8IWY9 1227 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 AMOTL1Q8IY63 956 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 ALKBH8Q96BT7 664 aaKnown RBP6.04□□□□□ -1.44
LINC00415-201ENST00000439079 EVI5LQ96CN4 794 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 KCTD15Q96SI1 283 aaPredicted RBP6.04□□□□□ -1.44
LINC00415-201ENST00000439079 PNMA2Q9UL42 364 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 WWC3Q9ULE0 1092 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 ZFYVE9O95405 1425 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 SETD5Q9C0A6 1442 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 ADGRB3O60242 1522 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 ASXL1Q8IXJ9 1541 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 GCC2Q8IWJ2 1684 aa6.04□□□□□ -1.44
LINC00415-201ENST00000439079 MARF1Q9Y4F3 1742 aaKnown RBP6.03□□□□□ -1.44
LINC00415-201ENST00000439079 NCOA3Q9Y6Q9 1424 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 RNF223E7ERA6 249 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 PPEF1O14829 653 aaPredicted RBP6.03□□□□□ -1.44
LINC00415-201ENST00000439079 ITGBL1O95965 494 aaPredicted RBP6.03□□□□□ -1.44
LINC00415-201ENST00000439079 ATF4P18848 351 aaPredicted RBP6.03□□□□□ -1.44
LINC00415-201ENST00000439079 ZEB1P37275 1124 aaPredicted RBP6.03□□□□□ -1.44
LINC00415-201ENST00000439079 GGCXP38435 758 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 MAPK8P45983 427 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 WNT7BP56706 349 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 AMPD3Q01432 767 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 EHHADHQ08426 723 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 HS2ST1Q7LGA3 356 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 C11orf96Q7Z7L8 435 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 USP48Q86UV5 1035 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 FERMT3Q86UX7 667 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 SAMD3Q8N6K7 520 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 ANKLE1Q8NAG6 615 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 TPCN2Q8NHX9 752 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 TMC1Q8TDI8 760 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 FBF1Q8TES7 1133 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 PKNOX2Q96KN3 472 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 RNPC3Q96LT9 517 aaKnown RBP6.03□□□□□ -1.44
LINC00415-201ENST00000439079 MAP4K5Q9Y4K4 846 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 MTUS2Q5JR59 1369 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 PNPLA6Q8IY17 1366 aa6.03□□□□□ -1.44
LINC00415-201ENST00000439079 SFI1A8K8P3 1242 aa6.02□□□□□ -1.45
LINC00415-201ENST00000439079 CDC45O75419 566 aa6.02□□□□□ -1.45
LINC00415-201ENST00000439079 MYCP01106 439 aaPredicted RBP6.02□□□□□ -1.45
LINC00415-201ENST00000439079 GNA15P30679 374 aa6.02□□□□□ -1.45
LINC00415-201ENST00000439079 MAN1A1P33908 653 aa6.02□□□□□ -1.45
LINC00415-201ENST00000439079 NOS2P35228 1153 aa6.02□□□□□ -1.45
LINC00415-201ENST00000439079 POU5F1BQ06416 359 aa6.02□□□□□ -1.45
LINC00415-201ENST00000439079 FOXD4Q12950 439 aaPredicted RBP6.02□□□□□ -1.45
LINC00415-201ENST00000439079 DDX17Q92841 729 aaKnown RBP6.02□□□□□ -1.45
LINC00415-201ENST00000439079 PRIMPOLQ96LW4 560 aa6.02□□□□□ -1.45
LINC00415-201ENST00000439079 FAM161BQ96MY7 647 aa6.02□□□□□ -1.45
LINC00415-201ENST00000439079 HCSTQ9UBK5 93 aa6.02□□□□□ -1.45
LINC00415-201ENST00000439079 ANAPC4Q9UJX5 808 aa6.02□□□□□ -1.45
LINC00415-201ENST00000439079 LAMC1P11047 1609 aa6.02□□□□□ -1.45
LINC00415-201ENST00000439079 ATRNO75882 1429 aa6.01□□□□□ -1.45
LINC00415-201ENST00000439079 NOS1P29475 1434 aa6.01□□□□□ -1.45
LINC00415-201ENST00000439079 ADAMTS13Q76LX8 1427 aa6.01□□□□□ -1.45
LINC00415-201ENST00000439079 PTPRUQ92729 1446 aa6.01□□□□□ -1.45
LINC00415-201ENST00000439079 TMEM131LA2VDJ0 1609 aa6.01□□□□□ -1.45
LINC00415-201ENST00000439079 M0R2N6 131 aa6.01□□□□□ -1.45
LINC00415-201ENST00000439079 NEFMP07197 916 aa6.01□□□□□ -1.45
LINC00415-201ENST00000439079 RPIAP49247 311 aa6.01□□□□□ -1.45
LINC00415-201ENST00000439079 VASH1Q7L8A9 365 aaPredicted RBP6.01□□□□□ -1.45
LINC00415-201ENST00000439079 CACTIN-AS1Q8N1I8 211 aa6.01□□□□□ -1.45
LINC00415-201ENST00000439079 APPBP2Q92624 585 aa6.01□□□□□ -1.45
LINC00415-201ENST00000439079 SEC16BQ96JE7 1060 aa6.01□□□□□ -1.45
LINC00415-201ENST00000439079 SRPK1Q96SB4 655 aaKnown RBP6.01□□□□□ -1.45
LINC00415-201ENST00000439079 APBA2Q99767 749 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms