RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 NBPF11Q86T75 865 aa6.55□□□□□ -1.36
TRAPPC13-204ENST00000438419 NCAPG2Q86XI2 1143 aa6.55□□□□□ -1.36
TRAPPC13-204ENST00000438419 PMEPA1Q969W9 287 aa6.55□□□□□ -1.36
TRAPPC13-204ENST00000438419 RASSF4Q9H2L5 321 aa6.55□□□□□ -1.36
TRAPPC13-204ENST00000438419 NFKBIEO00221 500 aa6.54□□□□□ -1.36
TRAPPC13-204ENST00000438419 POLR3DP05423 398 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC13-204ENST00000438419 MAPK1P28482 360 aa6.54□□□□□ -1.36
TRAPPC13-204ENST00000438419 ORC1Q13415 861 aa6.54□□□□□ -1.36
TRAPPC13-204ENST00000438419 CCDC27Q2M243 656 aa6.54□□□□□ -1.36
TRAPPC13-204ENST00000438419 USPL1Q5W0Q7 1092 aa6.54□□□□□ -1.36
TRAPPC13-204ENST00000438419 PBX4Q9BYU1 374 aa6.54□□□□□ -1.36
TRAPPC13-204ENST00000438419 NIF3L1Q9GZT8 377 aa6.54□□□□□ -1.36
TRAPPC13-204ENST00000438419 TRIM33Q9UPN9 1127 aa6.54□□□□□ -1.36
TRAPPC13-204ENST00000438419 PIK3R2O00459 728 aa6.53□□□□□ -1.36
TRAPPC13-204ENST00000438419 TRPA1O75762 1119 aa6.53□□□□□ -1.36
TRAPPC13-204ENST00000438419 PEAR1Q5VY43 1037 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC13-204ENST00000438419 MSL1Q68DK7 614 aa6.53□□□□□ -1.36
TRAPPC13-204ENST00000438419 DMRTC2Q8IXT2 367 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC13-204ENST00000438419 TMC1Q8TDI8 760 aa6.53□□□□□ -1.36
TRAPPC13-204ENST00000438419 SPACA7Q96KW9 195 aa6.53□□□□□ -1.36
TRAPPC13-204ENST00000438419 HHIPQ96QV1 700 aa6.53□□□□□ -1.36
TRAPPC13-204ENST00000438419 POP1Q99575 1024 aaKnown RBP6.53□□□□□ -1.36
TRAPPC13-204ENST00000438419 RBSNQ9H1K0 784 aa6.53□□□□□ -1.36
TRAPPC13-204ENST00000438419 DZANK1Q9NVP4 752 aa6.53□□□□□ -1.36
TRAPPC13-204ENST00000438419 FAM229AH3BQW9 127 aa6.52□□□□□ -1.37
TRAPPC13-204ENST00000438419 DSC3Q14574 896 aa6.52□□□□□ -1.37
TRAPPC13-204ENST00000438419 TRAPPC3LQ5T215 181 aa6.52□□□□□ -1.37
TRAPPC13-204ENST00000438419 CEP135Q66GS9 1140 aa6.52□□□□□ -1.37
TRAPPC13-204ENST00000438419 GDF6Q6KF10 455 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC13-204ENST00000438419 ZSCAN29Q8IWY8 852 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC13-204ENST00000438419 ALKBH8Q96BT7 664 aaKnown RBP6.52□□□□□ -1.37
TRAPPC13-204ENST00000438419 DMRTB1Q96MA1 342 aa6.52□□□□□ -1.37
TRAPPC13-204ENST00000438419 ZFP64Q9NPA5 681 aa6.52□□□□□ -1.37
TRAPPC13-204ENST00000438419 LATS2Q9NRM7 1088 aa6.52□□□□□ -1.37
TRAPPC13-204ENST00000438419 NOP53Q9NZM5 478 aaKnown RBP6.52□□□□□ -1.37
TRAPPC13-204ENST00000438419 AMOTL2Q9Y2J4 779 aa6.52□□□□□ -1.37
TRAPPC13-204ENST00000438419 ASB16Q96NS5 453 aa6.51□□□□□ -1.37
TRAPPC13-204ENST00000438419 ZKSCAN3Q9BRR0 538 aa6.51□□□□□ -1.37
TRAPPC13-204ENST00000438419 A0A0A0MRY4 1105 aa6.5□□□□□ -1.37
TRAPPC13-204ENST00000438419 EIF1AYO14602 144 aaKnown RBP6.5□□□□□ -1.37
TRAPPC13-204ENST00000438419 TREHO43280 583 aa6.5□□□□□ -1.37
TRAPPC13-204ENST00000438419 EDN3P14138 238 aa6.5□□□□□ -1.37
TRAPPC13-204ENST00000438419 WFDC8Q8IUA0 241 aa6.5□□□□□ -1.37
TRAPPC13-204ENST00000438419 GALNT12Q8IXK2 581 aa6.5□□□□□ -1.37
TRAPPC13-204ENST00000438419 IL22RA1Q8N6P7 574 aa6.5□□□□□ -1.37
TRAPPC13-204ENST00000438419 OSMRQ99650 979 aa6.5□□□□□ -1.37
TRAPPC13-204ENST00000438419 CPNE3O75131 537 aaKnown RBP6.5□□□□□ -1.37
TRAPPC13-204ENST00000438419 SMNDC1O75940 238 aaKnown RBP eCLIP6.5□□□□□ -1.37
TRAPPC13-204ENST00000438419 NEFLP07196 543 aa6.5□□□□□ -1.37
TRAPPC13-204ENST00000438419 TMEM102Q8N9M5 508 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC13-204ENST00000438419 NXPE3Q969Y0 559 aa6.5□□□□□ -1.37
TRAPPC13-204ENST00000438419 CSRNP1Q96S65 589 aa6.5□□□□□ -1.37
TRAPPC13-204ENST00000438419 LACRTQ9GZZ8 138 aa6.5□□□□□ -1.37
TRAPPC13-204ENST00000438419 SPDYE3A6NKU9 549 aa6.49□□□□□ -1.37
TRAPPC13-204ENST00000438419 PDE2AO00408 941 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-204ENST00000438419 DEAF1O75398 565 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-204ENST00000438419 ERCC3P19447 782 aa6.49□□□□□ -1.37
TRAPPC13-204ENST00000438419 PLCB3Q01970 1234 aa6.49□□□□□ -1.37
TRAPPC13-204ENST00000438419 TRIM28Q13263 835 aaKnown RBP6.49□□□□□ -1.37
TRAPPC13-204ENST00000438419 FMR1NBQ8N0W7 255 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-204ENST00000438419 ADAM19Q9H013 955 aa6.49□□□□□ -1.37
TRAPPC13-204ENST00000438419 DNAJC25Q9H1X3 360 aa6.49□□□□□ -1.37
TRAPPC13-204ENST00000438419 SH2B1Q9NRF2 756 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-204ENST00000438419 A0A1W2PP55 124 aa6.48□□□□□ -1.37
TRAPPC13-204ENST00000438419 SPATA31C1P0DKV0 1188 aa6.48□□□□□ -1.37
TRAPPC13-204ENST00000438419 GRIK4Q16099 956 aa6.48□□□□□ -1.37
TRAPPC13-204ENST00000438419 PRRT3Q5FWE3 981 aa6.48□□□□□ -1.37
TRAPPC13-204ENST00000438419 ARTNQ5T4W7 220 aa6.48□□□□□ -1.37
TRAPPC13-204ENST00000438419 CCDC74AQ96AQ1 378 aa6.48□□□□□ -1.37
TRAPPC13-204ENST00000438419 C1QTNF9BB2RNN3 333 aa6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 TM4SF5O14894 197 aa6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 EPHA1P21709 976 aa6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 CDC27P30260 824 aa6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 MFAP1P55081 439 aaKnown RBP6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 FMR1Q06787 632 aaKnown RBP eCLIP6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 KIAA0319Q5VV43 1072 aa6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 DNAJC14Q6Y2X3 702 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 FBXO11Q86XK2 927 aa6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 CACTIN-AS1Q8N1I8 211 aa6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 DTWD1Q8N5C7 304 aa6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 TCF12Q99081 682 aa6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 BHLHE41Q9C0J9 482 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 NPHS2Q9NP85 383 aa6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 CCDC9Q9Y3X0 531 aaKnown RBP6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 PPME1Q9Y570 386 aa6.47□□□□□ -1.37
TRAPPC13-204ENST00000438419 METTL12A8MUP2 240 aa6.46□□□□□ -1.38
TRAPPC13-204ENST00000438419 LINC01387J3KSC0 135 aa6.46□□□□□ -1.38
TRAPPC13-204ENST00000438419 ELNP15502 786 aa6.46□□□□□ -1.38
TRAPPC13-204ENST00000438419 SELPP16109 830 aa6.46□□□□□ -1.38
TRAPPC13-204ENST00000438419 PTPRAP18433 802 aa6.46□□□□□ -1.38
TRAPPC13-204ENST00000438419 CHRNA4P43681 627 aa6.46□□□□□ -1.38
TRAPPC13-204ENST00000438419 RAC1P63000 192 aa6.46□□□□□ -1.38
TRAPPC13-204ENST00000438419 DOC2BQ14184 412 aa6.46□□□□□ -1.38
TRAPPC13-204ENST00000438419 SETDB1Q15047 1291 aa6.46□□□□□ -1.38
TRAPPC13-204ENST00000438419 ENOX2Q16206 610 aaKnown RBP6.46□□□□□ -1.38
TRAPPC13-204ENST00000438419 TXNDC11Q6PKC3 985 aa6.46□□□□□ -1.38
TRAPPC13-204ENST00000438419 CD163Q86VB7 1156 aa6.46□□□□□ -1.38
TRAPPC13-204ENST00000438419 EPS8L3Q8TE67 593 aaKnown RBP6.46□□□□□ -1.38
TRAPPC13-204ENST00000438419 SOX13Q9UN79 622 aa6.46□□□□□ -1.38
TRAPPC13-204ENST00000438419 ANKRD33BA6NCL7 494 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms