RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SLC26A6Q9BXS9 759 aa7.71□□□□□ -1.17
CSDE1-205ENST00000438362 HELLSQ9NRZ9 838 aa7.71□□□□□ -1.17
CSDE1-205ENST00000438362 IFNKQ9P0W0 207 aa7.71□□□□□ -1.17
CSDE1-205ENST00000438362 TRMT112Q9UI30 125 aaKnown RBP7.71□□□□□ -1.17
CSDE1-205ENST00000438362 A0A0D9SFI3 127 aa7.71□□□□□ -1.18
CSDE1-205ENST00000438362 CLSTN1O94985 981 aa7.71□□□□□ -1.18
CSDE1-205ENST00000438362 GPTP24298 496 aa7.71□□□□□ -1.18
CSDE1-205ENST00000438362 ATP2B3Q16720 1220 aa7.71□□□□□ -1.18
CSDE1-205ENST00000438362 PDLIM2Q96JY6 352 aa7.71□□□□□ -1.18
CSDE1-205ENST00000438362 RNF41Q9H4P4 317 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-205ENST00000438362 ZDHHC9Q9Y397 364 aa7.71□□□□□ -1.18
CSDE1-205ENST00000438362 POLR3GO15318 223 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-205ENST00000438362 GIGYF1O75420 1035 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-205ENST00000438362 CYP2E1P05181 493 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-205ENST00000438362 LTKP29376 864 aa7.71□□□□□ -1.18
CSDE1-205ENST00000438362 TIMM10P62072 90 aa7.71□□□□□ -1.18
CSDE1-205ENST00000438362 SETQ01105 290 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-205ENST00000438362 GCKRQ14397 625 aa7.71□□□□□ -1.18
CSDE1-205ENST00000438362 KBTBD3Q8NAB2 608 aa7.71□□□□□ -1.18
CSDE1-205ENST00000438362 CPLX3Q8WVH0 158 aa7.71□□□□□ -1.18
CSDE1-205ENST00000438362 GBP3Q9H0R5 595 aa7.71□□□□□ -1.18
CSDE1-205ENST00000438362 LMTK2Q8IWU2 1503 aa7.71□□□□□ -1.18
CSDE1-205ENST00000438362 USP6P35125 1406 aa7.71□□□□□ -1.18
CSDE1-205ENST00000438362 CACNB1Q02641 598 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-205ENST00000438362 NAA16Q6N069 864 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-205ENST00000438362 KANK3Q6NY19 840 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 GTF3C6Q969F1 213 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 EDC3Q96F86 508 aaKnown RBP7.7□□□□□ -1.18
CSDE1-205ENST00000438362 BCL2L12Q9HB09 334 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 OGFRQ9NZT2 677 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 CALCOCO1Q9P1Z2 691 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 KIAA1210Q9ULL0 1709 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 SLC5A1P13866 664 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 ATP5JP18859 108 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 JAKMIP3Q5VZ66 844 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 MAP4K1Q92918 833 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 CCDC102AQ96A19 550 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 NCOA5Q9HCD5 579 aaKnown RBP7.7□□□□□ -1.18
CSDE1-205ENST00000438362 RAD21O60216 631 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 AXDND1Q5T1B0 1012 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-205ENST00000438362 DCAF5Q96JK2 942 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 TMX1Q9H3N1 280 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 NDUFB9Q9Y6M9 179 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 SLC9C2Q5TAH2 1124 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 MFSD6Q6ZSS7 791 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 CDK5RAP3Q96JB5 506 aa7.7□□□□□ -1.18
CSDE1-205ENST00000438362 SRRTQ9BXP5 876 aaKnown RBP7.7□□□□□ -1.18
CSDE1-205ENST00000438362 TEX13AQ9BXU3 409 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-205ENST00000438362 KDRP35968 1356 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 ROBO2Q9HCK4 1378 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 NR1I2O75469 434 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 MYCNP04198 464 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-205ENST00000438362 UQCRFS1P1P0C7P4 283 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 DDIT3P35638 169 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 EIF5P55010 431 aaKnown RBP7.69□□□□□ -1.18
CSDE1-205ENST00000438362 SYT10Q6XYQ8 523 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 IQCA1Q86XH1 822 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 ERO1AQ96HE7 468 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 CEP89Q96ST8 783 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 EYA2O00167 538 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 U2AF2P26368 475 aaKnown RBP eCLIP7.69□□□□□ -1.182e-12■■■■□ 24.2
CSDE1-205ENST00000438362 HSP90AA4PQ58FG1 418 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 TMEM87AQ8NBN3 555 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 CTCFLQ8NI51 663 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-205ENST00000438362 PI4K2BQ8TCG2 481 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 CCDC12Q8WUD4 166 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-205ENST00000438362 DEF6Q9H4E7 631 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 IGSF3O75054 1194 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 LRMPQ12912 555 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 POLA2Q14181 598 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 KIAA1328Q86T90 577 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 CCDC148Q8NFR7 591 aa7.69□□□□□ -1.18
CSDE1-205ENST00000438362 ELP1O95163 1332 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 A0A1B0GUL7 405 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 NEURL1BA8MQ27 555 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 RANBP6O60518 1105 aaKnown RBP7.68□□□□□ -1.18
CSDE1-205ENST00000438362 EPS15P42566 896 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 PLBD2Q8NHP8 589 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 PYCARDQ9ULZ3 195 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 NCOA3Q9Y6Q9 1424 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 MYL5Q02045 173 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 WTAPQ15007 396 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 KLHL34Q8N239 644 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 ZCRB1Q8TBF4 217 aaKnown RBP7.68□□□□□ -1.18
CSDE1-205ENST00000438362 LARGE1O95461 756 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 GTF2F1P35269 517 aaKnown RBP eCLIP7.68□□□□□ -1.18
CSDE1-205ENST00000438362 IQCEQ6IPM2 695 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 CATIPQ7Z7H3 387 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 KIAA1524Q8TCG1 905 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 NUP88Q99567 741 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-205ENST00000438362 KRT23Q9C075 422 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 ZSWIM4Q9H7M6 989 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 ARFGAP3Q9NP61 516 aa7.68□□□□□ -1.18
CSDE1-205ENST00000438362 PPRC1Q5VV67 1664 aaKnown RBP7.68□□□□□ -1.18
CSDE1-205ENST00000438362 POTEB2H3BUK9 544 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 RTN1Q16799 776 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 CCDC181Q5TID7 509 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 ANO1Q5XXA6 986 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 OTUD7BQ6GQQ9 843 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 TMTC2Q8N394 836 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms