RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 USP28Q96RU2 1077 aa19.62■□□□□ 0.73
TTC3-209ENST00000438055 NRBP1Q9UHY1 535 aa19.62■□□□□ 0.73
TTC3-209ENST00000438055 PFKFB2O60825 505 aa19.62■□□□□ 0.73
TTC3-209ENST00000438055 METTL24Q5JXM2 366 aa19.62■□□□□ 0.73
TTC3-209ENST00000438055 KIF6Q6ZMV9 814 aa19.62■□□□□ 0.73
TTC3-209ENST00000438055 CCDC191Q8NCU4 936 aa19.62■□□□□ 0.73
TTC3-209ENST00000438055 C16orf45Q96MC5 204 aaPredicted RBP19.62■□□□□ 0.73
TTC3-209ENST00000438055 MAST3O60307 1309 aa19.62■□□□□ 0.73
TTC3-209ENST00000438055 IFIT5Q13325 482 aaKnown RBP19.62■□□□□ 0.73
TTC3-209ENST00000438055 LRP10Q7Z4F1 713 aa19.62■□□□□ 0.73
TTC3-209ENST00000438055 CNNM1Q9NRU3 951 aa19.62■□□□□ 0.73
TTC3-209ENST00000438055 GOLGA8BA8MQT2 603 aa19.61■□□□□ 0.73
TTC3-209ENST00000438055 PI16Q6UXB8 463 aa19.61■□□□□ 0.73
TTC3-209ENST00000438055 MAP7D2Q96T17 732 aa19.61■□□□□ 0.73
TTC3-209ENST00000438055 TMOD3Q9NYL9 352 aa19.61■□□□□ 0.73
TTC3-209ENST00000438055 TRDNQ13061 729 aa19.61■□□□□ 0.73
TTC3-209ENST00000438055 ZMYM1Q5SVZ6 1142 aa19.61■□□□□ 0.73
TTC3-209ENST00000438055 PCDH11XQ9BZA7 1347 aa19.61■□□□□ 0.73
TTC3-209ENST00000438055 PCDH11YQ9BZA8 1340 aa19.61■□□□□ 0.73
TTC3-209ENST00000438055 IDH1O75874 414 aaKnown RBP19.61■□□□□ 0.73
TTC3-209ENST00000438055 DSCC1Q9BVC3 393 aa19.61■□□□□ 0.73
TTC3-209ENST00000438055 KLF18A0A0U1RQI7 1052 aa19.6■□□□□ 0.73
TTC3-209ENST00000438055 XAGE2Q96GT9 111 aa19.6■□□□□ 0.73
TTC3-209ENST00000438055 CTNNA3Q9UI47 895 aa19.6■□□□□ 0.73
TTC3-209ENST00000438055 TUBGCP6Q96RT7 1819 aa19.6■□□□□ 0.73
TTC3-209ENST00000438055 M0R2C6 588 aa19.6■□□□□ 0.73
TTC3-209ENST00000438055 SYNE3Q6ZMZ3 975 aa19.6■□□□□ 0.73
TTC3-209ENST00000438055 OSBP2Q969R2 916 aa19.6■□□□□ 0.73
TTC3-209ENST00000438055 C8orf76Q96K31 380 aa19.6■□□□□ 0.73
TTC3-209ENST00000438055 ALDH8A1Q9H2A2 487 aaPredicted RBP19.6■□□□□ 0.73
TTC3-209ENST00000438055 LMO7Q8WWI1 1683 aa19.6■□□□□ 0.73
TTC3-209ENST00000438055 PRIMPOLQ96LW4 560 aa19.59■□□□□ 0.73
TTC3-209ENST00000438055 TOMM22Q9NS69 142 aa19.59■□□□□ 0.73
TTC3-209ENST00000438055 SH3TC1Q8TE82 1336 aa19.59■□□□□ 0.73
TTC3-209ENST00000438055 CHD2O14647 1828 aaKnown RBP19.59■□□□□ 0.73
TTC3-209ENST00000438055 CASP7P55210 303 aa19.59■□□□□ 0.73
TTC3-209ENST00000438055 MYRIPQ8NFW9 859 aa19.59■□□□□ 0.73
TTC3-209ENST00000438055 KCNF1Q9H3M0 494 aa19.59■□□□□ 0.73
TTC3-209ENST00000438055 AKAP2Q9Y2D5 859 aa19.59■□□□□ 0.73
TTC3-209ENST00000438055 LDHAL6AQ6ZMR3 332 aa19.59■□□□□ 0.73
TTC3-209ENST00000438055 IL2RBP14784 551 aa19.58■□□□□ 0.73
TTC3-209ENST00000438055 PDIA3P30101 505 aaKnown RBP19.58■□□□□ 0.73
TTC3-209ENST00000438055 ZAP70P43403 619 aa19.58■□□□□ 0.73
TTC3-209ENST00000438055 TPD52L1Q16890 204 aaPredicted RBP19.58■□□□□ 0.73
TTC3-209ENST00000438055 KIAA1524Q8TCG1 905 aa19.58■□□□□ 0.73
TTC3-209ENST00000438055 LLPHQ9BRT6 129 aaKnown RBP19.58■□□□□ 0.73
TTC3-209ENST00000438055 ORC3Q9UBD5 711 aaPredicted RBP19.58■□□□□ 0.73
TTC3-209ENST00000438055 PRC1O43663 620 aa19.58■□□□□ 0.73
TTC3-209ENST00000438055 ZNF75DP51815 510 aa19.58■□□□□ 0.72
TTC3-209ENST00000438055 A0A1B0GVL5 298 aa19.57■□□□□ 0.72
TTC3-209ENST00000438055 ZNF213O14771 459 aa19.57■□□□□ 0.72
TTC3-209ENST00000438055 STK11IPQ8N1F8 1099 aa19.57■□□□□ 0.72
TTC3-209ENST00000438055 BIN1O00499 593 aa19.57■□□□□ 0.72
TTC3-209ENST00000438055 DNAJC10Q8IXB1 793 aa19.57■□□□□ 0.72
TTC3-209ENST00000438055 SYNE4Q8N205 404 aa19.57■□□□□ 0.72
TTC3-209ENST00000438055 RXRAP19793 462 aa19.57■□□□□ 0.72
TTC3-209ENST00000438055 CCDC144CPQ8IYA2 1237 aa19.57■□□□□ 0.72
TTC3-209ENST00000438055 SLIT3O75094 1523 aa19.56■□□□□ 0.72
TTC3-209ENST00000438055 DHX16O60231 1041 aaKnown RBP19.56■□□□□ 0.72
TTC3-209ENST00000438055 STX1AQ16623 288 aa19.56■□□□□ 0.72
TTC3-209ENST00000438055 NAA16Q6N069 864 aaPredicted RBP19.56■□□□□ 0.72
TTC3-209ENST00000438055 NFXL1Q6ZNB6 911 aa19.56■□□□□ 0.72
TTC3-209ENST00000438055 CHMP4CQ96CF2 233 aa19.56■□□□□ 0.72
TTC3-209ENST00000438055 CTDNEP1O95476 244 aa19.56■□□□□ 0.72
TTC3-209ENST00000438055 ATP2B3Q16720 1220 aa19.56■□□□□ 0.72
TTC3-209ENST00000438055 GJB4Q9NTQ9 266 aa19.56■□□□□ 0.72
TTC3-209ENST00000438055 C11orf57Q6ZUT1 292 aaPredicted RBP19.55■□□□□ 0.72
TTC3-209ENST00000438055 CEP57L1Q8IYX8 460 aa19.55■□□□□ 0.72
TTC3-209ENST00000438055 SPATA31A3Q5VYP0 1347 aa19.55■□□□□ 0.72
TTC3-209ENST00000438055 FGAP02671 866 aa19.55■□□□□ 0.72
TTC3-209ENST00000438055 SCARF1Q14162 830 aa19.55■□□□□ 0.72
TTC3-209ENST00000438055 ISM2Q6H9L7 571 aa19.55■□□□□ 0.72
TTC3-209ENST00000438055 SMARCC2Q8TAQ2 1214 aa19.55■□□□□ 0.72
TTC3-209ENST00000438055 TCIRG1Q13488 830 aa19.54■□□□□ 0.72
TTC3-209ENST00000438055 MTERF4Q7Z6M4 381 aaKnown RBP19.54■□□□□ 0.72
TTC3-209ENST00000438055 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.54■□□□□ 0.725e-7■□□□□ 10.5
TTC3-209ENST00000438055 ERVV-2B6SEH9 535 aa19.54■□□□□ 0.72
TTC3-209ENST00000438055 SLC9C2Q5TAH2 1124 aa19.54■□□□□ 0.72
TTC3-209ENST00000438055 HELBQ8NG08 1087 aaPredicted RBP19.54■□□□□ 0.72
TTC3-209ENST00000438055 NCOA7Q8NI08 942 aa19.54■□□□□ 0.72
TTC3-209ENST00000438055 ANO10Q9NW15 660 aa19.54■□□□□ 0.72
TTC3-209ENST00000438055 CTAGE5O15320 804 aa19.53■□□□□ 0.72
TTC3-209ENST00000438055 AOPEPQ8N6M6 819 aa19.53■□□□□ 0.72
TTC3-209ENST00000438055 GOLPH3LQ9H4A5 285 aa19.53■□□□□ 0.72
TTC3-209ENST00000438055 GPR108Q9NPR9 543 aa19.53■□□□□ 0.72
TTC3-209ENST00000438055 RIOK3O14730 519 aaKnown RBP19.53■□□□□ 0.72
TTC3-209ENST00000438055 GPAA1O43292 621 aa19.53■□□□□ 0.72
TTC3-209ENST00000438055 MRPS27Q92552 414 aaKnown RBP19.53■□□□□ 0.72
TTC3-209ENST00000438055 PUS7LQ9H0K6 701 aaKnown RBP19.53■□□□□ 0.72
TTC3-209ENST00000438055 ASAP1Q9ULH1 1129 aa19.53■□□□□ 0.72
TTC3-209ENST00000438055 SMC2O95347 1197 aa19.53■□□□□ 0.72
TTC3-209ENST00000438055 STARD3NLO95772 234 aa19.53■□□□□ 0.72
TTC3-209ENST00000438055 FAM160A1Q05DH4 1040 aa19.53■□□□□ 0.72
TTC3-209ENST00000438055 TRMT112Q9UI30 125 aaKnown RBP19.53■□□□□ 0.72
TTC3-209ENST00000438055 WDR17Q8IZU2 1322 aa19.53■□□□□ 0.72
TTC3-209ENST00000438055 TNNT1P13805 278 aa19.52■□□□□ 0.72
TTC3-209ENST00000438055 EXOSC10Q01780 885 aaKnown RBP19.52■□□□□ 0.72
TTC3-209ENST00000438055 NAT10Q9H0A0 1025 aaKnown RBP19.52■□□□□ 0.72
TTC3-209ENST00000438055 RCOR1Q9UKL0 485 aa19.52■□□□□ 0.72
TTC3-209ENST00000438055 MICU3Q86XE3 530 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms