RNA–Protein interactions for RNA: ENST00000436894.1

NCL-204, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-204ENST00000436894 ANKIB1Q9P2G1 1089 aa6.92□□□□□ -1.3
NCL-204ENST00000436894 RTCBQ9Y3I0 505 aaKnown RBP6.92□□□□□ -1.3
NCL-204ENST00000436894 GPC6Q9Y625 555 aaPredicted RBP6.92□□□□□ -1.3
NCL-204ENST00000436894 ARHGAP23Q9P227 1491 aa6.92□□□□□ -1.3
NCL-204ENST00000436894 EHBP1L1Q8N3D4 1523 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 TIAM1Q13009 1591 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 TREHO43280 583 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 KCNA6P17658 529 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 LTKP29376 864 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 UBAP2LQ14157 1087 aaKnown RBP6.91□□□□□ -1.3
NCL-204ENST00000436894 GRIN2CQ14957 1233 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 HIF1AQ16665 826 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 FBXO33Q7Z6M2 555 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 CMTR1Q8N1G2 835 aaKnown RBP6.91□□□□□ -1.3
NCL-204ENST00000436894 SETDB2Q96T68 719 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 NIF3L1Q9GZT8 377 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 SENP2Q9HC62 589 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 KCNMB2Q9Y691 235 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 JCADQ9P266 1359 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 ERVK-7P63135 1459 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 ABCC3O15438 1527 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 ARHGEF5Q12774 1597 aa6.91□□□□□ -1.3
NCL-204ENST00000436894 UBR1Q8IWV7 1749 aa6.9□□□□□ -1.3
NCL-204ENST00000436894 DCDC2BA2VCK2 349 aa6.9□□□□□ -1.3
NCL-204ENST00000436894 ZNF16P17020 682 aaPredicted RBP6.9□□□□□ -1.3
NCL-204ENST00000436894 ARSDP51689 593 aa6.9□□□□□ -1.3
NCL-204ENST00000436894 ORC1Q13415 861 aa6.9□□□□□ -1.3
NCL-204ENST00000436894 DSC3Q14574 896 aa6.9□□□□□ -1.3
NCL-204ENST00000436894 BRD7Q9NPI1 651 aa6.9□□□□□ -1.3
NCL-204ENST00000436894 RNF19AQ9NV58 838 aa6.9□□□□□ -1.3
NCL-204ENST00000436894 AMOTL2Q9Y2J4 779 aa6.9□□□□□ -1.3
NCL-204ENST00000436894 ARHGAP31Q2M1Z3 1444 aa6.9□□□□□ -1.31
NCL-204ENST00000436894 EIF2AK4Q9P2K8 1649 aaKnown RBP6.9□□□□□ -1.31
NCL-204ENST00000436894 RBM47A0AV96 593 aaKnown RBP6.89□□□□□ -1.31
NCL-204ENST00000436894 ERCC3P19447 782 aa6.89□□□□□ -1.31
NCL-204ENST00000436894 MAPK8P45983 427 aa6.89□□□□□ -1.31
NCL-204ENST00000436894 EHHADHQ08426 723 aa6.89□□□□□ -1.31
NCL-204ENST00000436894 SFSWAPQ12872 951 aaKnown RBP6.89□□□□□ -1.31
NCL-204ENST00000436894 EFHC2Q5JST6 749 aa6.89□□□□□ -1.31
NCL-204ENST00000436894 NLRP8Q86W28 1048 aa6.89□□□□□ -1.31
NCL-204ENST00000436894 PIK3R5Q8WYR1 880 aa6.89□□□□□ -1.31
NCL-204ENST00000436894 KIFC2Q96AC6 838 aa6.89□□□□□ -1.31
NCL-204ENST00000436894 NUCKS1Q9H1E3 243 aaKnown RBP6.89□□□□□ -1.31
NCL-204ENST00000436894 STRN4Q9NRL3 753 aa6.89□□□□□ -1.31
NCL-204ENST00000436894 WWC3Q9ULE0 1092 aa6.89□□□□□ -1.31
NCL-204ENST00000436894 SPATA31A6Q5VVP1 1343 aa6.89□□□□□ -1.31
NCL-204ENST00000436894 MSH6P52701 1360 aa6.89□□□□□ -1.31
NCL-204ENST00000436894 TMEM94Q12767 1356 aa6.89□□□□□ -1.31
NCL-204ENST00000436894 TMEM2Q9UHN6 1383 aa6.89□□□□□ -1.31
NCL-204ENST00000436894 CAMSAP2Q08AD1 1489 aa6.89□□□□□ -1.31
NCL-204ENST00000436894 XIRP1Q702N8 1843 aaKnown RBP6.89□□□□□ -1.31
NCL-204ENST00000436894 KDM5AP29375 1690 aaKnown RBP6.88□□□□□ -1.31
NCL-204ENST00000436894 ROBO1Q9Y6N7 1651 aa6.88□□□□□ -1.31
NCL-204ENST00000436894 NCOA2Q15596 1464 aa6.88□□□□□ -1.31
NCL-204ENST00000436894 C11orf95C9JLR9 678 aaPredicted RBP6.88□□□□□ -1.31
NCL-204ENST00000436894 KHNYNO15037 678 aaKnown RBP6.88□□□□□ -1.31
NCL-204ENST00000436894 ATXN7O15265 892 aaPredicted RBP6.88□□□□□ -1.31
NCL-204ENST00000436894 BNIP3LO60238 219 aa6.88□□□□□ -1.31
NCL-204ENST00000436894 FMR1Q06787 632 aaKnown RBP eCLIP6.88□□□□□ -1.312e-10■□□□□ 8.9
NCL-204ENST00000436894 DMRTB1Q96MA1 342 aa6.88□□□□□ -1.31
NCL-204ENST00000436894 CITED4Q96RK1 184 aa6.88□□□□□ -1.31
NCL-204ENST00000436894 FOXD3Q9UJU5 478 aaPredicted RBP6.88□□□□□ -1.31
NCL-204ENST00000436894 MAST1Q9Y2H9 1570 aa6.87□□□□□ -1.31
NCL-204ENST00000436894 NKTRP30414 1462 aaKnown RBP6.87□□□□□ -1.31
NCL-204ENST00000436894 FGD6Q6ZV73 1430 aa6.87□□□□□ -1.31
NCL-204ENST00000436894 NCOA3Q9Y6Q9 1424 aa6.87□□□□□ -1.31
NCL-204ENST00000436894 ITGA6P23229 1130 aa6.87□□□□□ -1.31
NCL-204ENST00000436894 USP5P45974 858 aa6.87□□□□□ -1.31
NCL-204ENST00000436894 PLCB3Q01970 1234 aa6.87□□□□□ -1.31
NCL-204ENST00000436894 PDE3BQ13370 1112 aa6.87□□□□□ -1.31
NCL-204ENST00000436894 EAPPQ56P03 285 aaPredicted RBP6.87□□□□□ -1.31
NCL-204ENST00000436894 SAMD5Q5TGI4 173 aa6.87□□□□□ -1.31
NCL-204ENST00000436894 MEX3CQ5U5Q3 659 aaKnown RBP6.87□□□□□ -1.31
NCL-204ENST00000436894 GTPBP3Q969Y2 492 aaKnown RBP6.87□□□□□ -1.31
NCL-204ENST00000436894 ZNF837Q96EG3 531 aaPredicted RBP6.87□□□□□ -1.31
NCL-204ENST00000436894 ABHD17AQ96GS6 310 aa6.87□□□□□ -1.31
NCL-204ENST00000436894 TMEM63CQ9P1W3 806 aa6.87□□□□□ -1.31
NCL-204ENST00000436894 PRDM15P57071 1507 aaPredicted RBP6.86□□□□□ -1.31
NCL-204ENST00000436894 KANK1Q14678 1352 aa6.86□□□□□ -1.31
NCL-204ENST00000436894 GPR25O00155 361 aa6.86□□□□□ -1.31
NCL-204ENST00000436894 EFSO43281 561 aa6.86□□□□□ -1.31
NCL-204ENST00000436894 XYLBO75191 536 aa6.86□□□□□ -1.31
NCL-204ENST00000436894 MAPTP10636 758 aaKnown RBP6.86□□□□□ -1.31
NCL-204ENST00000436894 RXRBP28702 533 aa6.86□□□□□ -1.31
NCL-204ENST00000436894 VEGFBP49765 207 aa6.86□□□□□ -1.31
NCL-204ENST00000436894 TNP2Q05952 138 aa6.86□□□□□ -1.31
NCL-204ENST00000436894 USPL1Q5W0Q7 1092 aa6.86□□□□□ -1.31
NCL-204ENST00000436894 KRT25Q7Z3Z0 450 aa6.86□□□□□ -1.31
NCL-204ENST00000436894 TRIM22Q8IYM9 498 aa6.86□□□□□ -1.31
NCL-204ENST00000436894 ALKBH8Q96BT7 664 aaKnown RBP6.86□□□□□ -1.31
NCL-204ENST00000436894 NDFIP2Q9NV92 336 aa6.86□□□□□ -1.31
NCL-204ENST00000436894 FAM13BQ9NYF5 915 aa6.86□□□□□ -1.31
NCL-204ENST00000436894 KIAA1522Q9P206 1035 aaPredicted RBP6.86□□□□□ -1.31
NCL-204ENST00000436894 PCDHGC4Q9Y5F7 938 aa6.86□□□□□ -1.31
NCL-204ENST00000436894 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.86□□□□□ -1.31
NCL-204ENST00000436894 DUOX2Q9NRD8 1548 aa6.86□□□□□ -1.31
NCL-204ENST00000436894 CDK12Q9NYV4 1490 aaPredicted RBP6.85□□□□□ -1.31
NCL-204ENST00000436894 PHLPP1O60346 1717 aa6.85□□□□□ -1.31
NCL-204ENST00000436894 PNMA6FA0A0J9YX94 578 aa6.85□□□□□ -1.31
NCL-204ENST00000436894 CDC14CA4D256 554 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms