RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 SCN11AQ9UI33 1791 aa7.92□□□□□ -1.14
ECHDC1-208ENST00000436638 SLC39A6Q13433 755 aa7.92□□□□□ -1.14
ECHDC1-208ENST00000436638 MYH16Q9H6N6 1097 aa7.92□□□□□ -1.14
ECHDC1-208ENST00000436638 ATG3Q9NT62 314 aa7.92□□□□□ -1.14
ECHDC1-208ENST00000436638 IFT57Q9NWB7 429 aa7.92□□□□□ -1.14
ECHDC1-208ENST00000436638 BABAM1Q9NWV8 329 aa7.92□□□□□ -1.14
ECHDC1-208ENST00000436638 ASAP1Q9ULH1 1129 aa7.92□□□□□ -1.14
ECHDC1-208ENST00000436638 PALLDQ8WX93 1383 aa7.92□□□□□ -1.14
ECHDC1-208ENST00000436638 DLG5Q8TDM6 1919 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 PLSCR1O15162 318 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 PTCD1O75127 700 aaKnown RBP7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 IRX6P78412 446 aaPredicted RBP7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 SLC27A3Q5K4L6 730 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 PDXDC2PQ6P474 469 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 ZNF790Q6PG37 636 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 SH3BP5LQ7L8J4 393 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 PTF1AQ7RTS3 328 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 DEFB132Q7Z7B7 95 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 BANK1Q8NDB2 785 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 HPS1Q92902 700 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 YTHDC1Q96MU7 727 aaKnown RBP7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 FMNL2Q96PY5 1086 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 ARHGAP9Q9BRR9 750 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 MIS18AQ9NYP9 233 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 CCNL1Q9UK58 526 aaPredicted RBP7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 BRPF3Q9ULD4 1205 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 IL16Q14005 1332 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 MRC1P22897 1456 aa7.91□□□□□ -1.14
ECHDC1-208ENST00000436638 SBF2Q86WG5 1849 aa7.9□□□□□ -1.14
ECHDC1-208ENST00000436638 TOGARAM1Q9Y4F4 1720 aa7.9□□□□□ -1.14
ECHDC1-208ENST00000436638 LOC102724428A0A0B4J2F2 783 aa7.9□□□□□ -1.14
ECHDC1-208ENST00000436638 CHL1O00533 1208 aa7.9□□□□□ -1.14
ECHDC1-208ENST00000436638 ST8SIA5O15466 376 aa7.9□□□□□ -1.14
ECHDC1-208ENST00000436638 SIK1P57059 783 aa7.9□□□□□ -1.14
ECHDC1-208ENST00000436638 PTK2Q05397 1052 aa7.9□□□□□ -1.14
ECHDC1-208ENST00000436638 TXNRD1Q16881 649 aa7.9□□□□□ -1.14
ECHDC1-208ENST00000436638 CC2D2BQ6DHV5 1058 aa7.9□□□□□ -1.14
ECHDC1-208ENST00000436638 SH3RF1Q7Z6J0 888 aa7.9□□□□□ -1.14
ECHDC1-208ENST00000436638 TRIM34Q9BYJ4 488 aa7.9□□□□□ -1.14
ECHDC1-208ENST00000436638 ZMYND15Q9H091 742 aa7.9□□□□□ -1.14
ECHDC1-208ENST00000436638 SNRKQ9NRH2 765 aa7.9□□□□□ -1.14
ECHDC1-208ENST00000436638 ITGB4P16144 1822 aa7.89□□□□□ -1.15
ECHDC1-208ENST00000436638 ADAMTS7Q9UKP4 1686 aa7.89□□□□□ -1.15
ECHDC1-208ENST00000436638 ZC3H4Q9UPT8 1303 aaKnown RBP7.89□□□□□ -1.15
ECHDC1-208ENST00000436638 E9PSI1 815 aa7.89□□□□□ -1.15
ECHDC1-208ENST00000436638 AXIN1O15169 862 aa7.89□□□□□ -1.15
ECHDC1-208ENST00000436638 KCNQ3O43525 872 aa7.89□□□□□ -1.15
ECHDC1-208ENST00000436638 AVPP01185 164 aa7.89□□□□□ -1.15
ECHDC1-208ENST00000436638 RBM10P98175 930 aaKnown RBP7.89□□□□□ -1.15
ECHDC1-208ENST00000436638 EZH2Q15910 746 aaKnown RBP7.89□□□□□ -1.15
ECHDC1-208ENST00000436638 ZBTB33Q86T24 672 aa7.89□□□□□ -1.15
ECHDC1-208ENST00000436638 TEX13AQ9BXU3 409 aaPredicted RBP7.89□□□□□ -1.15
ECHDC1-208ENST00000436638 AAASQ9NRG9 546 aa7.89□□□□□ -1.15
ECHDC1-208ENST00000436638 MBIPQ9NS73 344 aa7.89□□□□□ -1.15
ECHDC1-208ENST00000436638 BTAF1O14981 1849 aa7.89□□□□□ -1.15
ECHDC1-208ENST00000436638 HEG1Q9ULI3 1381 aa7.88□□□□□ -1.15
ECHDC1-208ENST00000436638 ZBED9Q6R2W3 1325 aa7.88□□□□□ -1.15
ECHDC1-208ENST00000436638 VIRMAQ69YN4 1812 aaKnown RBP7.88□□□□□ -1.15
ECHDC1-208ENST00000436638 SOCS7O14512 581 aa7.88□□□□□ -1.15
ECHDC1-208ENST00000436638 RAD21O60216 631 aa7.88□□□□□ -1.15
ECHDC1-208ENST00000436638 STARD3NLO95772 234 aa7.88□□□□□ -1.15
ECHDC1-208ENST00000436638 SNRPA1P09661 255 aaKnown RBP7.88□□□□□ -1.15
ECHDC1-208ENST00000436638 EIF4A1P60842 406 aaKnown RBP7.88□□□□□ -1.15
ECHDC1-208ENST00000436638 ZNF496Q96IT1 587 aaPredicted RBP7.88□□□□□ -1.15
ECHDC1-208ENST00000436638 CAMKK2Q96RR4 588 aa7.88□□□□□ -1.15
ECHDC1-208ENST00000436638 TNS1Q9HBL0 1735 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-208ENST00000436638 ZNF521Q96K83 1311 aa7.87□□□□□ -1.15
ECHDC1-208ENST00000436638 ZNF853P0CG23 659 aa7.87□□□□□ -1.15
ECHDC1-208ENST00000436638 EIF2S2P20042 333 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-208ENST00000436638 SLFN5Q08AF3 891 aa7.87□□□□□ -1.15
ECHDC1-208ENST00000436638 CTC1Q2NKJ3 1217 aa7.87□□□□□ -1.15
ECHDC1-208ENST00000436638 CERS3Q8IU89 383 aa7.87□□□□□ -1.15
ECHDC1-208ENST00000436638 DNAJC10Q8IXB1 793 aa7.87□□□□□ -1.15
ECHDC1-208ENST00000436638 MPNDQ8N594 471 aa7.87□□□□□ -1.15
ECHDC1-208ENST00000436638 KCTD17Q8N5Z5 321 aa7.87□□□□□ -1.15
ECHDC1-208ENST00000436638 MTMR14Q8NCE2 650 aa7.87□□□□□ -1.15
ECHDC1-208ENST00000436638 TSR2Q969E8 191 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-208ENST00000436638 STK32BQ9NY57 414 aa7.87□□□□□ -1.15
ECHDC1-208ENST00000436638 FANCIQ9NVI1 1328 aa7.86□□□□□ -1.15
ECHDC1-208ENST00000436638 APBB1O00213 710 aa7.86□□□□□ -1.15
ECHDC1-208ENST00000436638 ELL2O00472 640 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-208ENST00000436638 GIGYF1O75420 1035 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-208ENST00000436638 ADH1CP00326 375 aa7.86□□□□□ -1.15
ECHDC1-208ENST00000436638 KCNQ4P56696 695 aa7.86□□□□□ -1.15
ECHDC1-208ENST00000436638 NNTQ13423 1086 aa7.86□□□□□ -1.15
ECHDC1-208ENST00000436638 ERFEQ4G0M1 354 aa7.86□□□□□ -1.15
ECHDC1-208ENST00000436638 DUSP27Q5VZP5 1158 aa7.86□□□□□ -1.15
ECHDC1-208ENST00000436638 VASH1Q7L8A9 365 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-208ENST00000436638 CDK15Q96Q40 435 aa7.86□□□□□ -1.15
ECHDC1-208ENST00000436638 C1QTNF2Q9BXJ5 285 aa7.86□□□□□ -1.15
ECHDC1-208ENST00000436638 SOS1Q07889 1333 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-208ENST00000436638 SIPA1L3O60292 1781 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-208ENST00000436638 KCPQ6ZWJ8 1503 aa7.85□□□□□ -1.15
ECHDC1-208ENST00000436638 HOXB7P09629 217 aa7.85□□□□□ -1.15
ECHDC1-208ENST00000436638 SETQ01105 290 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-208ENST00000436638 EXOSC9Q06265 439 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-208ENST00000436638 ITPK1Q13572 414 aa7.85□□□□□ -1.15
ECHDC1-208ENST00000436638 TWISTNBQ3B726 338 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-208ENST00000436638 HDGFL1Q5TGJ6 251 aa7.85□□□□□ -1.15
ECHDC1-208ENST00000436638 ADAM32Q8TC27 787 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms