RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ANKRD18BA2A2Z9 1011 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 C2orf72A6NCS6 295 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 GLTPD2A6NH11 291 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 PPIP5K2O43314 1243 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 PLIN1O60240 522 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 CSF1RP07333 972 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 DSG2Q14126 1118 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 DOK7Q18PE1 504 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 FAM161AQ3B820 660 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 GRIPAP1Q4V328 841 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 SUPT20HQ8NEM7 779 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 SUCLG2Q96I99 432 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 PSMD1Q99460 953 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 MPHOSPH8Q99549 860 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 API5Q9BZZ5 524 aaKnown RBP7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 USP44Q9H0E7 712 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 POLLQ9UGP5 575 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 GJA3Q9Y6H8 435 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 KDM2BQ8NHM5 1336 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 LTBP3Q9NS15 1303 aa7.27□□□□□ -1.25
HMGB3P24-201ENST00000433260 KIF3CO14782 793 aa7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 IPO8O15397 1037 aaKnown RBP7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 IGHMBP2P38935 993 aaKnown RBP7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 CCT4P50991 539 aaKnown RBP7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 EIF6P56537 245 aaKnown RBP7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 IFIT5Q13325 482 aaKnown RBP7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 CAMK2BQ13554 666 aa7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 WASHC4Q2M389 1173 aa7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 CCDC57Q2TAC2 916 aa7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 TAF7LQ5H9L4 462 aa7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 TMC4Q7Z404 712 aa7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 PLPP6Q8IY26 295 aa7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 NIM1KQ8IY84 436 aa7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 HELBQ8NG08 1087 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 TBC1D16Q8TBP0 767 aa7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 KAZALD1Q96I82 304 aa7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 CDC5LQ99459 802 aaKnown RBP7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 PLA2G12BQ9BX93 195 aa7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 ZC3H12CQ9C0D7 883 aaKnown RBP7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 ZNF541Q9H0D2 1346 aa7.26□□□□□ -1.25
HMGB3P24-201ENST00000433260 POTECB2RU33 542 aa7.25□□□□□ -1.25
HMGB3P24-201ENST00000433260 FZD9O00144 591 aa7.25□□□□□ -1.25
HMGB3P24-201ENST00000433260 TAF5LO75529 589 aa7.25□□□□□ -1.25
HMGB3P24-201ENST00000433260 ZKSCAN2Q63HK3 967 aa7.25□□□□□ -1.25
HMGB3P24-201ENST00000433260 MAMSTRQ6ZN01 415 aa7.25□□□□□ -1.25
HMGB3P24-201ENST00000433260 C16orf71Q8IYS4 520 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P24-201ENST00000433260 KLHDC4Q8TBB5 520 aa7.25□□□□□ -1.25
HMGB3P24-201ENST00000433260 ARHGAP45Q92619 1136 aa7.25□□□□□ -1.25
HMGB3P24-201ENST00000433260 RTFDC1Q9BY42 306 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P24-201ENST00000433260 BICC1Q9H694 974 aaKnown RBP7.25□□□□□ -1.25
HMGB3P24-201ENST00000433260 DBNDD1Q9H9R9 158 aa7.25□□□□□ -1.25
HMGB3P24-201ENST00000433260 KCNQ5Q9NR82 932 aa7.25□□□□□ -1.25
HMGB3P24-201ENST00000433260 BSDC1Q9NW68 430 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P24-201ENST00000433260 MINPP1Q9UNW1 487 aa7.25□□□□□ -1.25
HMGB3P24-201ENST00000433260 SNAP23O00161 211 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 RAD17O75943 681 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 UFL1O94874 794 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 TRIM27P14373 513 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 VEGFAP15692 232 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 BRPF1P55201 1214 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 C1QTNF8P60827 252 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 CHRNDQ07001 517 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 KIAA2012Q0VF49 1180 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 ATF7IPQ6VMQ6 1270 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 LDHAL6AQ6ZMR3 332 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 TMEM57Q8N5G2 664 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 EYA3Q99504 573 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 PUS3Q9BZE2 481 aaKnown RBP7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 CNNM1Q9NRU3 951 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 GGA1Q9UJY5 639 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 ZNRF3Q9ULT6 936 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 COL4A5P29400 1685 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 SNED1Q8TER0 1413 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 UTYO14607 1347 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 KIF16BQ96L93 1317 aa7.24□□□□□ -1.25
HMGB3P24-201ENST00000433260 TOMM70O94826 608 aa7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 UBTFL1P0CB47 393 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 ATP2B4P23634 1241 aa7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 KCNJ4P48050 445 aa7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 CXCL9Q07325 125 aa7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 EAPPQ56P03 285 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 INTS3Q68E01 1043 aaKnown RBP7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 SMYD5Q6GMV2 418 aa7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 GPC2Q8N158 579 aa7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 ANKRD44Q8N8A2 993 aa7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 FBXW7Q969H0 707 aa7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 MEIS3Q99687 375 aa7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 ANKRD2Q9GZV1 360 aa7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 VPS33BQ9H267 617 aa7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 SCUBE2Q9NQ36 999 aa7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 PODXL2Q9NZ53 605 aa7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 ARIH1Q9Y4X5 557 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 LRRFIP2Q9Y608 721 aaKnown RBP7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 XDHP47989 1333 aa7.23□□□□□ -1.25
HMGB3P24-201ENST00000433260 LRRC37AA6NMS7 1700 aa7.22□□□□□ -1.25
HMGB3P24-201ENST00000433260 YDJCA8MPS7 323 aa7.22□□□□□ -1.25
HMGB3P24-201ENST00000433260 ECE2O60344 883 aa7.22□□□□□ -1.25
HMGB3P24-201ENST00000433260 POTEJP0CG39 1038 aa7.22□□□□□ -1.25
HMGB3P24-201ENST00000433260 TNIP1Q15025 636 aa7.22□□□□□ -1.25
HMGB3P24-201ENST00000433260 LRRC24Q50LG9 513 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms