RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 CHRDQ9H2X0 955 aa6.44□□□□□ -1.38
CLK1-204ENST00000432425 PPME1Q9Y570 386 aa6.44□□□□□ -1.38
CLK1-204ENST00000432425 EREGO14944 169 aa6.43□□□□□ -1.38
CLK1-204ENST00000432425 ARHGAP4P98171 946 aa6.43□□□□□ -1.38
CLK1-204ENST00000432425 DEAF1O75398 565 aaPredicted RBP6.42□□□□□ -1.38
CLK1-204ENST00000432425 NEFLP07196 543 aa6.42□□□□□ -1.38
CLK1-204ENST00000432425 EDN3P14138 238 aa6.42□□□□□ -1.38
CLK1-204ENST00000432425 PDE3BQ13370 1112 aa6.42□□□□□ -1.38
CLK1-204ENST00000432425 DOC2BQ14184 412 aa6.42□□□□□ -1.38
CLK1-204ENST00000432425 ADGRE1Q14246 886 aa6.42□□□□□ -1.38
CLK1-204ENST00000432425 MBTPS1Q14703 1052 aa6.42□□□□□ -1.38
CLK1-204ENST00000432425 ECM1Q16610 540 aa6.42□□□□□ -1.38
CLK1-204ENST00000432425 FAM117BQ6P1L5 589 aa6.42□□□□□ -1.38
CLK1-204ENST00000432425 AMOTL2Q9Y2J4 779 aa6.42□□□□□ -1.38
CLK1-204ENST00000432425 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.42□□□□□ -1.38
CLK1-204ENST00000432425 LINC01387J3KSC0 135 aa6.42□□□□□ -1.38
CLK1-204ENST00000432425 ACPPP15309 386 aa6.42□□□□□ -1.38
CLK1-204ENST00000432425 IGF2-ASQ6U949 168 aa6.42□□□□□ -1.38
CLK1-204ENST00000432425 TXNRD3Q86VQ6 643 aa6.42□□□□□ -1.38
CLK1-204ENST00000432425 DZANK1Q9NVP4 752 aa6.42□□□□□ -1.38
CLK1-204ENST00000432425 GNEQ9Y223 722 aaKnown RBP6.42□□□□□ -1.38
CLK1-204ENST00000432425 SOWAHDA6NJG2 315 aa6.41□□□□□ -1.38
CLK1-204ENST00000432425 PDE2AO00408 941 aaPredicted RBP6.41□□□□□ -1.38
CLK1-204ENST00000432425 DLL1O00548 723 aa6.41□□□□□ -1.38
CLK1-204ENST00000432425 FURINP09958 794 aa6.41□□□□□ -1.38
CLK1-204ENST00000432425 CDC25BP30305 580 aa6.41□□□□□ -1.38
CLK1-204ENST00000432425 CABP4P57796 275 aa6.41□□□□□ -1.38
CLK1-204ENST00000432425 SETDB1Q15047 1291 aa6.41□□□□□ -1.38
CLK1-204ENST00000432425 TMC1Q8TDI8 760 aa6.41□□□□□ -1.38
CLK1-204ENST00000432425 CITED4Q96RK1 184 aa6.41□□□□□ -1.38
CLK1-204ENST00000432425 POP1Q99575 1024 aaKnown RBP6.41□□□□□ -1.38
CLK1-204ENST00000432425 OSMRQ99650 979 aa6.41□□□□□ -1.38
CLK1-204ENST00000432425 ZFYVE28Q9HCC9 887 aa6.41□□□□□ -1.38
CLK1-204ENST00000432425 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.38
CLK1-204ENST00000432425 K7ELQ4 463 aaPredicted RBP6.4□□□□□ -1.38
CLK1-204ENST00000432425 TXNDC11Q6PKC3 985 aa6.4□□□□□ -1.38
CLK1-204ENST00000432425 BIN2Q9UBW5 565 aaPredicted RBP6.4□□□□□ -1.38
CLK1-204ENST00000432425 TRPA1O75762 1119 aa6.39□□□□□ -1.39
CLK1-204ENST00000432425 TMEM102Q8N9M5 508 aaPredicted RBP6.39□□□□□ -1.39
CLK1-204ENST00000432425 ZKSCAN3Q9BRR0 538 aa6.39□□□□□ -1.39
CLK1-204ENST00000432425 ADAM19Q9H013 955 aa6.39□□□□□ -1.39
CLK1-204ENST00000432425 MRPL18Q9H0U6 180 aaKnown RBP6.39□□□□□ -1.39
CLK1-204ENST00000432425 SH2B1Q9NRF2 756 aaPredicted RBP6.39□□□□□ -1.39
CLK1-204ENST00000432425 NFKBIEO00221 500 aa6.39□□□□□ -1.39
CLK1-204ENST00000432425 ADAM23O75077 832 aa6.39□□□□□ -1.39
CLK1-204ENST00000432425 EPHA1P21709 976 aa6.39□□□□□ -1.39
CLK1-204ENST00000432425 ADAMTSL4Q6UY14 1074 aa6.39□□□□□ -1.39
CLK1-204ENST00000432425 FAM129BQ96TA1 746 aa6.39□□□□□ -1.39
CLK1-204ENST00000432425 CARD10Q9BWT7 1032 aa6.39□□□□□ -1.39
CLK1-204ENST00000432425 TPSG1Q9NRR2 321 aa6.39□□□□□ -1.39
CLK1-204ENST00000432425 H3BRJ5 948 aa6.38□□□□□ -1.39
CLK1-204ENST00000432425 FSCN2O14926 492 aa6.38□□□□□ -1.39
CLK1-204ENST00000432425 POLR3DP05423 398 aaPredicted RBP6.38□□□□□ -1.39
CLK1-204ENST00000432425 IREB2P48200 963 aaKnown RBP6.38□□□□□ -1.39
CLK1-204ENST00000432425 KCNA1Q09470 495 aa6.38□□□□□ -1.39
CLK1-204ENST00000432425 LCE3BQ5TA77 95 aa6.38□□□□□ -1.39
CLK1-204ENST00000432425 WFDC12Q8WWY7 111 aa6.38□□□□□ -1.39
CLK1-204ENST00000432425 HHIPQ96QV1 700 aa6.38□□□□□ -1.39
CLK1-204ENST00000432425 LATS2Q9NRM7 1088 aa6.38□□□□□ -1.39
CLK1-204ENST00000432425 CD68P34810 354 aaPredicted RBP6.37□□□□□ -1.39
CLK1-204ENST00000432425 KLHL23Q8NBE8 558 aa6.37□□□□□ -1.39
CLK1-204ENST00000432425 GALNT11Q8NCW6 608 aa6.37□□□□□ -1.39
CLK1-204ENST00000432425 NXPE3Q969Y0 559 aa6.37□□□□□ -1.39
CLK1-204ENST00000432425 AKTIPQ9H8T0 292 aa6.37□□□□□ -1.39
CLK1-204ENST00000432425 SEC31BQ9NQW1 1179 aa6.37□□□□□ -1.39
CLK1-204ENST00000432425 CPNE3O75131 537 aaKnown RBP6.36□□□□□ -1.39
CLK1-204ENST00000432425 NOS3P29474 1203 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 PIP4K2BP78356 416 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 GALNT12Q8IXK2 581 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 ASAP3Q8TDY4 903 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 BSNDQ8WZ55 320 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 DMRTB1Q96MA1 342 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 TRAIPQ9BWF2 469 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 IVNS1ABPQ9Y6Y0 642 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 ARL4DP49703 201 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 ORC1Q13415 861 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 RSPO4Q2I0M5 234 aaPredicted RBP6.36□□□□□ -1.39
CLK1-204ENST00000432425 FOXD4L6Q3SYB3 417 aaPredicted RBP6.36□□□□□ -1.39
CLK1-204ENST00000432425 PEAR1Q5VY43 1037 aaPredicted RBP6.36□□□□□ -1.39
CLK1-204ENST00000432425 FOXD4L3Q6VB84 417 aaPredicted RBP6.36□□□□□ -1.39
CLK1-204ENST00000432425 SLC7A3Q8WY07 619 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 WNT8BQ93098 351 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 TP53INP1Q96A56 240 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 RBCK1Q9BYM8 510 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 BHLHE41Q9C0J9 482 aaPredicted RBP6.36□□□□□ -1.39
CLK1-204ENST00000432425 NIF3L1Q9GZT8 377 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 SEMA6BQ9H3T3 888 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 DCTN4Q9UJW0 460 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 SOX13Q9UN79 622 aa6.36□□□□□ -1.39
CLK1-204ENST00000432425 PATL2C9JE40 543 aaKnown RBP6.35□□□□□ -1.39
CLK1-204ENST00000432425 F8W735 103 aaPredicted RBP6.35□□□□□ -1.39
CLK1-204ENST00000432425 GPR182O15218 404 aa6.35□□□□□ -1.39
CLK1-204ENST00000432425 USPL1Q5W0Q7 1092 aa6.35□□□□□ -1.39
CLK1-204ENST00000432425 TMEM130Q8N3G9 435 aa6.35□□□□□ -1.39
CLK1-204ENST00000432425 OSGEPQ9NPF4 335 aa6.35□□□□□ -1.39
CLK1-204ENST00000432425 MAPK1P28482 360 aa6.34□□□□□ -1.39
CLK1-204ENST00000432425 DUOXA2Q1HG44 320 aa6.34□□□□□ -1.39
CLK1-204ENST00000432425 ACAD11Q709F0 780 aa6.34□□□□□ -1.39
CLK1-204ENST00000432425 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.34□□□□□ -1.39
CLK1-204ENST00000432425 DNAJC25Q9H1X3 360 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms