RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 NPAS4Q8IUM7 802 aa9.56□□□□□ -0.88
VTI1A-202ENST00000432306 RNF214Q8ND24 703 aa9.56□□□□□ -0.88
VTI1A-202ENST00000432306 EVI5LQ96CN4 794 aa9.56□□□□□ -0.88
VTI1A-202ENST00000432306 BCL2L12Q9HB09 334 aa9.56□□□□□ -0.88
VTI1A-202ENST00000432306 GDPD2Q9HCC8 539 aa9.56□□□□□ -0.88
VTI1A-202ENST00000432306 CPDO75976 1380 aa9.56□□□□□ -0.88
VTI1A-202ENST00000432306 VTI1AQ96AJ9 217 aa9.56□□□□□ -0.88
VTI1A-202ENST00000432306 SYT17Q9BSW7 474 aa9.56□□□□□ -0.88
VTI1A-202ENST00000432306 FAN1Q9Y2M0 1017 aa9.56□□□□□ -0.88
VTI1A-202ENST00000432306 WNK3Q9BYP7 1800 aa9.55□□□□□ -0.88
VTI1A-202ENST00000432306 LRRC37A3O60309 1634 aa9.55□□□□□ -0.88
VTI1A-202ENST00000432306 GNPATO15228 680 aa9.55□□□□□ -0.88
VTI1A-202ENST00000432306 ZBTB7AO95365 584 aa9.55□□□□□ -0.88
VTI1A-202ENST00000432306 CHMLP26374 656 aa9.55□□□□□ -0.88
VTI1A-202ENST00000432306 HSPA4P34932 840 aa9.55□□□□□ -0.88
VTI1A-202ENST00000432306 FAM193AP78312 1265 aa9.55□□□□□ -0.88
VTI1A-202ENST00000432306 ZFYVE27Q5T4F4 411 aa9.55□□□□□ -0.88
VTI1A-202ENST00000432306 MTA3Q9BTC8 594 aa9.55□□□□□ -0.88
VTI1A-202ENST00000432306 STK32BQ9NY57 414 aa9.55□□□□□ -0.88
VTI1A-202ENST00000432306 ATP6V1DQ9Y5K8 247 aa9.55□□□□□ -0.88
VTI1A-202ENST00000432306 AK9Q5TCS8 1911 aa9.55□□□□□ -0.88
VTI1A-202ENST00000432306 CRB1P82279 1406 aa9.54□□□□□ -0.88
VTI1A-202ENST00000432306 SH3BP5O60239 455 aa9.54□□□□□ -0.88
VTI1A-202ENST00000432306 IBSPP21815 317 aaPredicted RBP9.54□□□□□ -0.88
VTI1A-202ENST00000432306 CCT4P50991 539 aaKnown RBP9.54□□□□□ -0.88
VTI1A-202ENST00000432306 PTGDRQ13258 359 aa9.54□□□□□ -0.88
VTI1A-202ENST00000432306 ATP2B3Q16720 1220 aa9.54□□□□□ -0.88
VTI1A-202ENST00000432306 NUTM2GQ5VZR2 741 aa9.54□□□□□ -0.88
VTI1A-202ENST00000432306 KRBA2Q6ZNG9 492 aa9.54□□□□□ -0.88
VTI1A-202ENST00000432306 PDCL2Q8N4E4 241 aa9.54□□□□□ -0.88
VTI1A-202ENST00000432306 PMM1Q92871 262 aa9.54□□□□□ -0.88
VTI1A-202ENST00000432306 NUDT16Q96DE0 195 aaKnown RBP9.54□□□□□ -0.88
VTI1A-202ENST00000432306 TTC14Q96N46 770 aa9.54□□□□□ -0.88
VTI1A-202ENST00000432306 THUMPD2Q9BTF0 503 aaKnown RBP9.54□□□□□ -0.88
VTI1A-202ENST00000432306 CDK19Q9BWU1 502 aa9.54□□□□□ -0.88
VTI1A-202ENST00000432306 FHDC1Q9C0D6 1143 aaPredicted RBP9.54□□□□□ -0.88
VTI1A-202ENST00000432306 CDHR5Q9HBB8 845 aa9.54□□□□□ -0.88
VTI1A-202ENST00000432306 TOPAZ1Q8N9V7 1692 aa9.54□□□□□ -0.88
VTI1A-202ENST00000432306 SOS1Q07889 1333 aaPredicted RBP9.54□□□□□ -0.88
VTI1A-202ENST00000432306 CCDC171Q6TFL3 1326 aa9.54□□□□□ -0.88
VTI1A-202ENST00000432306 GADD45BO75293 160 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-202ENST00000432306 APLP1P51693 650 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 GABPB1Q06547 395 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-202ENST00000432306 HIC1Q14526 733 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 DDB1Q16531 1140 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 PPP4R3BQ5MIZ7 849 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 DNTTIP2Q5QJE6 756 aaKnown RBP9.53□□□□□ -0.88
VTI1A-202ENST00000432306 SDE2Q6IQ49 451 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 SPACA7Q96KW9 195 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 MEIS3Q99687 375 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 MAF1Q9H063 256 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 CABP1Q9NZU7 370 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 PCDHGA10Q9Y5H3 936 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 COL5A2P05997 1499 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-202ENST00000432306 DLG5Q8TDM6 1919 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 KAT6BQ8WYB5 2073 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 GOLGA6L6A8MZA4 724 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 GIGYF1O75420 1035 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-202ENST00000432306 RECKO95980 971 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 ZSCAN22P10073 491 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-202ENST00000432306 MARSP56192 900 aaKnown RBP9.53□□□□□ -0.88
VTI1A-202ENST00000432306 ABTB2Q8N961 1025 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 PROCA1Q8NCQ7 364 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-202ENST00000432306 CHAMP1Q96JM3 812 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 SPOCK3Q9BQ16 436 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 MTFR1LQ9H019 292 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 TTC12Q9H892 705 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-202ENST00000432306 OGFRQ9NZT2 677 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 PALD1Q9ULE6 856 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 PXDNLA1KZ92 1463 aa9.53□□□□□ -0.88
VTI1A-202ENST00000432306 HOXB3P14651 431 aaPredicted RBP9.52□□□□□ -0.89
VTI1A-202ENST00000432306 FOXD4Q12950 439 aaPredicted RBP9.52□□□□□ -0.89
VTI1A-202ENST00000432306 CHAF1AQ13111 956 aaPredicted RBP9.52□□□□□ -0.89
VTI1A-202ENST00000432306 CREBRFQ8IUR6 639 aa9.52□□□□□ -0.89
VTI1A-202ENST00000432306 BRINP2Q9C0B6 783 aa9.52□□□□□ -0.89
VTI1A-202ENST00000432306 PDGFDQ9GZP0 370 aaPredicted RBP9.52□□□□□ -0.89
VTI1A-202ENST00000432306 KCNF1Q9H3M0 494 aa9.52□□□□□ -0.89
VTI1A-202ENST00000432306 CHPF2Q9P2E5 772 aa9.52□□□□□ -0.89
VTI1A-202ENST00000432306 BCL9O00512 1426 aa9.52□□□□□ -0.89
VTI1A-202ENST00000432306 ACEP12821 1306 aa9.52□□□□□ -0.89
VTI1A-202ENST00000432306 RAD50Q92878 1312 aa9.52□□□□□ -0.89
VTI1A-202ENST00000432306 MAP3K5Q99683 1374 aa9.51□□□□□ -0.89
VTI1A-202ENST00000432306 ELL2O00472 640 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-202ENST00000432306 F13A1P00488 732 aa9.51□□□□□ -0.89
VTI1A-202ENST00000432306 HMOX1P09601 288 aa9.51□□□□□ -0.89
VTI1A-202ENST00000432306 HCLS1P14317 486 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-202ENST00000432306 ERCC5P28715 1186 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-202ENST00000432306 SLC15A2Q16348 729 aa9.51□□□□□ -0.89
VTI1A-202ENST00000432306 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-202ENST00000432306 LRRCC1Q9C099 1032 aa9.51□□□□□ -0.89
VTI1A-202ENST00000432306 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-202ENST00000432306 MON2Q7Z3U7 1717 aa9.51□□□□□ -0.89
VTI1A-202ENST00000432306 ELP1O95163 1332 aa9.51□□□□□ -0.89
VTI1A-202ENST00000432306 N4BP2Q86UW6 1770 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-202ENST00000432306 MAP2P11137 1827 aaKnown RBP9.51□□□□□ -0.89
VTI1A-202ENST00000432306 GNAI2P04899 355 aa9.51□□□□□ -0.89
VTI1A-202ENST00000432306 CLEC4GQ6UXB4 293 aa9.51□□□□□ -0.89
VTI1A-202ENST00000432306 RBM43Q6ZSC3 357 aaKnown RBP9.51□□□□□ -0.89
VTI1A-202ENST00000432306 KHSRPQ92945 711 aaKnown RBP eCLIP9.51□□□□□ -0.89
VTI1A-202ENST00000432306 EPAS1Q99814 870 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms