RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 GLIS2Q9BZE0 524 aaPredicted RBP22.15■■□□□ 1.14
NUP50-208ENST00000430547 FMR1Q06787 632 aaKnown RBP eCLIP22.14■■□□□ 1.13
NUP50-208ENST00000430547 ZNF594Q96JF6 807 aaPredicted RBP22.14■■□□□ 1.13
NUP50-208ENST00000430547 ZNF646O15015 1829 aaPredicted RBP22.14■■□□□ 1.13
NUP50-208ENST00000430547 PCNTO95613 3336 aa22.13■■□□□ 1.13
NUP50-208ENST00000430547 TAF5LO75529 589 aa22.13■■□□□ 1.13
NUP50-208ENST00000430547 DEFB115Q30KQ5 88 aa22.13■■□□□ 1.13
NUP50-208ENST00000430547 HELBQ8NG08 1087 aaPredicted RBP22.13■■□□□ 1.13
NUP50-208ENST00000430547 DCPSQ96C86 337 aaKnown RBP22.13■■□□□ 1.13
NUP50-208ENST00000430547 USP17L8P0C7I0 530 aa22.12■■□□□ 1.13
NUP50-208ENST00000430547 TXNRD3Q86VQ6 643 aa22.12■■□□□ 1.13
NUP50-208ENST00000430547 BICC1Q9H694 974 aaKnown RBP22.12■■□□□ 1.13
NUP50-208ENST00000430547 ZNF408Q9H9D4 720 aa22.12■■□□□ 1.13
NUP50-208ENST00000430547 MYO3BQ8WXR4 1341 aa22.11■■□□□ 1.13
NUP50-208ENST00000430547 RASSF10A6NK89 507 aa22.11■■□□□ 1.13
NUP50-208ENST00000430547 PLIN1O60240 522 aa22.11■■□□□ 1.13
NUP50-208ENST00000430547 CELF2O95319 508 aaKnown RBP22.11■■□□□ 1.13
NUP50-208ENST00000430547 EGFRP00533 1210 aa22.11■■□□□ 1.13
NUP50-208ENST00000430547 KLRK1P26718 216 aa22.11■■□□□ 1.13
NUP50-208ENST00000430547 STRIP1Q5VSL9 837 aa22.11■■□□□ 1.13
NUP50-208ENST00000430547 PAXIP1Q6ZW49 1069 aaPredicted RBP22.11■■□□□ 1.13
NUP50-208ENST00000430547 HSPA1AP0DMV8 641 aaKnown RBP22.1■■□□□ 1.13
NUP50-208ENST00000430547 HSPA1BP0DMV9 641 aaKnown RBP22.1■■□□□ 1.13
NUP50-208ENST00000430547 VEGFBP49765 207 aa22.1■■□□□ 1.13
NUP50-208ENST00000430547 KRT26Q7Z3Y9 468 aa22.1■■□□□ 1.13
NUP50-208ENST00000430547 ZNF804AQ7Z570 1209 aa22.1■■□□□ 1.13
NUP50-208ENST00000430547 KAZALD1Q96I82 304 aa22.1■■□□□ 1.13
NUP50-208ENST00000430547 API5Q9BZZ5 524 aaKnown RBP22.1■■□□□ 1.13
NUP50-208ENST00000430547 NOB1Q9ULX3 412 aaKnown RBP22.1■■□□□ 1.13
NUP50-208ENST00000430547 KIF16BQ96L93 1317 aa22.09■■□□□ 1.13
NUP50-208ENST00000430547 ZNF280AP59817 542 aaPredicted RBP22.09■■□□□ 1.13
NUP50-208ENST00000430547 HNRNPUQ00839 825 aaKnown RBP eCLIP22.09■■□□□ 1.13
NUP50-208ENST00000430547 RABL6Q3YEC7 729 aaPredicted RBP22.09■■□□□ 1.13
NUP50-208ENST00000430547 DACT2Q5SW24 774 aa22.09■■□□□ 1.13
NUP50-208ENST00000430547 CST9Q5W186 159 aa22.09■■□□□ 1.13
NUP50-208ENST00000430547 USP48Q86UV5 1035 aa22.09■■□□□ 1.13
NUP50-208ENST00000430547 OGFOD1Q8N543 542 aa22.09■■□□□ 1.13
NUP50-208ENST00000430547 GMLQ99445 158 aa22.09■■□□□ 1.13
NUP50-208ENST00000430547 MYOZ2Q9NPC6 264 aa22.09■■□□□ 1.13
NUP50-208ENST00000430547 SNAP23O00161 211 aa22.08■■□□□ 1.13
NUP50-208ENST00000430547 TTLL5Q6EMB2 1281 aa22.08■■□□□ 1.13
NUP50-208ENST00000430547 SULF1Q8IWU6 871 aa22.08■■□□□ 1.13
NUP50-208ENST00000430547 USP44Q9H0E7 712 aa22.08■■□□□ 1.13
NUP50-208ENST00000430547 GGA3Q9NZ52 723 aa22.08■■□□□ 1.13
NUP50-208ENST00000430547 ECE1P42892 770 aa22.07■■□□□ 1.12
NUP50-208ENST00000430547 RARSP54136 660 aaKnown RBP22.07■■□□□ 1.12
NUP50-208ENST00000430547 BRPF1P55201 1214 aaPredicted RBP22.07■■□□□ 1.12
NUP50-208ENST00000430547 GTF2IP78347 998 aa22.07■■□□□ 1.12
NUP50-208ENST00000430547 C15orf52Q6ZUT6 534 aaKnown RBP22.07■■□□□ 1.12
NUP50-208ENST00000430547 CD209Q9NNX6 404 aa22.07■■□□□ 1.12
NUP50-208ENST00000430547 TLL2Q9Y6L7 1015 aa22.07■■□□□ 1.12
NUP50-208ENST00000430547 GRM1Q13255 1194 aa22.06■■□□□ 1.12
NUP50-208ENST00000430547 ANKRD44Q8N8A2 993 aa22.06■■□□□ 1.12
NUP50-208ENST00000430547 MXD3Q9BW11 206 aa22.06■■□□□ 1.12
NUP50-208ENST00000430547 MROH5Q6ZUA9 1318 aa22.06■■□□□ 1.12
NUP50-208ENST00000430547 WDR33Q9C0J8 1336 aaKnown RBP22.06■■□□□ 1.12
NUP50-208ENST00000430547 UBTFL1P0CB47 393 aaPredicted RBP22.05■■□□□ 1.12
NUP50-208ENST00000430547 SCARF1Q14162 830 aa22.05■■□□□ 1.12
NUP50-208ENST00000430547 PUS3Q9BZE2 481 aaKnown RBP22.05■■□□□ 1.12
NUP50-208ENST00000430547 HDAC9Q9UKV0 1011 aa22.05■■□□□ 1.12
NUP50-208ENST00000430547 ADM5C9JUS6 153 aa22.04■■□□□ 1.12
NUP50-208ENST00000430547 MMP14P50281 582 aa22.04■■□□□ 1.12
NUP50-208ENST00000430547 UBE4AQ14139 1066 aa22.04■■□□□ 1.12
NUP50-208ENST00000430547 ANGEL2Q5VTE6 544 aaKnown RBP22.04■■□□□ 1.12
NUP50-208ENST00000430547 AIDAQ96BJ3 306 aa22.04■■□□□ 1.12
NUP50-208ENST00000430547 CAPNS2Q96L46 248 aa22.04■■□□□ 1.12
NUP50-208ENST00000430547 HDAC5Q9UQL6 1122 aa22.04■■□□□ 1.12
NUP50-208ENST00000430547 IRS2Q9Y4H2 1338 aa22.04■■□□□ 1.12
NUP50-208ENST00000430547 METTL24Q5JXM2 366 aa22.03■■□□□ 1.12
NUP50-208ENST00000430547 SAPCD2Q86UD0 394 aa22.03■■□□□ 1.12
NUP50-208ENST00000430547 KIAA0825Q8IV33 1275 aa22.03■■□□□ 1.12
NUP50-208ENST00000430547 ASTN2O75129 1339 aaPredicted RBP22.03■■□□□ 1.12
NUP50-208ENST00000430547 IL1R1P14778 569 aa22.02■■□□□ 1.12
NUP50-208ENST00000430547 CYP4F22Q6NT55 531 aa22.02■■□□□ 1.12
NUP50-208ENST00000430547 RIPOR2Q9Y4F9 1068 aa22.02■■□□□ 1.12
NUP50-208ENST00000430547 THSD7BQ9C0I4 1608 aa22.02■■□□□ 1.11
NUP50-208ENST00000430547 IPO8O15397 1037 aaKnown RBP22.01■■□□□ 1.11
NUP50-208ENST00000430547 ARHGAP45Q92619 1136 aa22.01■■□□□ 1.11
NUP50-208ENST00000430547 PITPNM2Q9BZ72 1349 aa22.01■■□□□ 1.11
NUP50-208ENST00000430547 ECM29Q5VYK3 1845 aa22.01■■□□□ 1.11
NUP50-208ENST00000430547 LRRC24Q50LG9 513 aa22■■□□□ 1.11
NUP50-208ENST00000430547 DLK2Q6UY11 383 aa22■■□□□ 1.11
NUP50-208ENST00000430547 C2orf69Q8N8R5 385 aa22■■□□□ 1.11
NUP50-208ENST00000430547 HHIPL1Q96JK4 782 aa22■■□□□ 1.11
NUP50-208ENST00000430547 GBA2Q9HCG7 927 aaPredicted RBP22■■□□□ 1.11
NUP50-208ENST00000430547 ARAP2Q8WZ64 1704 aa22■■□□□ 1.11
NUP50-208ENST00000430547 HUNKP57058 714 aa21.99■■□□□ 1.11
NUP50-208ENST00000430547 MAP2K1Q02750 393 aaPredicted RBP21.99■■□□□ 1.11
NUP50-208ENST00000430547 NBPF9Q3BBW0 867 aa21.99■■□□□ 1.11
NUP50-208ENST00000430547 VPS37DQ86XT2 251 aa21.99■■□□□ 1.11
NUP50-208ENST00000430547 KLHDC4Q8TBB5 520 aa21.99■■□□□ 1.11
NUP50-208ENST00000430547 FRAT1Q92837 279 aaPredicted RBP21.99■■□□□ 1.11
NUP50-208ENST00000430547 MYH13Q9UKX3 1938 aa21.99■■□□□ 1.11
NUP50-208ENST00000430547 WNT10BO00744 389 aa21.98■■□□□ 1.11
NUP50-208ENST00000430547 HIBADHP31937 336 aaKnown RBP21.98■■□□□ 1.11
NUP50-208ENST00000430547 GYG1P46976 350 aa21.98■■□□□ 1.11
NUP50-208ENST00000430547 CDCA5Q96FF9 252 aa21.98■■□□□ 1.11
NUP50-208ENST00000430547 SASH1O94885 1247 aa21.97■■□□□ 1.11
NUP50-208ENST00000430547 PDE8BO95263 885 aa21.97■■□□□ 1.11
NUP50-208ENST00000430547 FKBP1AP62942 108 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms