RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 PI16Q6UXB8 463 aa31.92■■■□□ 2.7
SH3GL3-202ENST00000427482 TNRC6CQ9HCJ0 1690 aaKnown RBP31.92■■■□□ 2.7
SH3GL3-202ENST00000427482 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.91■■■□□ 2.7
SH3GL3-202ENST00000427482 CHRNDQ07001 517 aa31.91■■■□□ 2.7
SH3GL3-202ENST00000427482 CARMIL3Q8ND23 1372 aa31.91■■■□□ 2.7
SH3GL3-202ENST00000427482 EP400Q96L91 3159 aa31.91■■■□□ 2.7
SH3GL3-202ENST00000427482 ZFYP08048 801 aaPredicted RBP31.91■■■□□ 2.7
SH3GL3-202ENST00000427482 ADCK5Q3MIX3 580 aa31.91■■■□□ 2.7
SH3GL3-202ENST00000427482 SLFNL1Q499Z3 407 aa31.91■■■□□ 2.7
SH3GL3-202ENST00000427482 JAKMIP1Q96N16 626 aaKnown RBP31.91■■■□□ 2.7
SH3GL3-202ENST00000427482 NLRP3Q96P20 1036 aa31.91■■■□□ 2.7
SH3GL3-202ENST00000427482 HMG20BQ9P0W2 317 aa31.91■■■□□ 2.7
SH3GL3-202ENST00000427482 RPAP1Q9BWH6 1393 aaPredicted RBP31.91■■■□□ 2.7
SH3GL3-202ENST00000427482 CASTP20810 708 aaKnown RBP31.9■■■□□ 2.7
SH3GL3-202ENST00000427482 ZSWIM6Q9HCJ5 1215 aa31.89■■■□□ 2.7
SH3GL3-202ENST00000427482 MAST3O60307 1309 aa31.89■■■□□ 2.7
SH3GL3-202ENST00000427482 DOCK2Q92608 1830 aa31.89■■■□□ 2.7
SH3GL3-202ENST00000427482 BSDC1Q9NW68 430 aaPredicted RBP31.89■■■□□ 2.69
SH3GL3-202ENST00000427482 U3KPZ7 1027 aaPredicted RBP31.89■■■□□ 2.69
SH3GL3-202ENST00000427482 CUL4AQ13619 759 aa31.88■■■□□ 2.69
SH3GL3-202ENST00000427482 NFIXQ14938 502 aa31.88■■■□□ 2.69
SH3GL3-202ENST00000427482 TSGA10IPQ3SY00 556 aa31.88■■■□□ 2.69
SH3GL3-202ENST00000427482 SNAP23O00161 211 aa31.87■■■□□ 2.69
SH3GL3-202ENST00000427482 CWC22Q9HCG8 908 aaKnown RBP31.87■■■□□ 2.69
SH3GL3-202ENST00000427482 RAB3GAP1Q15042 981 aa31.86■■■□□ 2.69
SH3GL3-202ENST00000427482 TTF1Q15361 905 aaPredicted RBP31.86■■■□□ 2.69
SH3GL3-202ENST00000427482 CYP2E1P05181 493 aaPredicted RBP31.86■■■□□ 2.69
SH3GL3-202ENST00000427482 TXNRD1Q16881 649 aa31.86■■■□□ 2.69
SH3GL3-202ENST00000427482 DSCC1Q9BVC3 393 aa31.86■■■□□ 2.69
SH3GL3-202ENST00000427482 CYP46A1Q9Y6A2 500 aa31.86■■■□□ 2.69
SH3GL3-202ENST00000427482 HMGB2P26583 209 aaKnown RBP31.85■■■□□ 2.69
SH3GL3-202ENST00000427482 NOL8Q76FK4 1167 aaKnown RBP31.85■■■□□ 2.69
SH3GL3-202ENST00000427482 CELF1Q92879 486 aaKnown RBP31.85■■■□□ 2.69
SH3GL3-202ENST00000427482 M0R2C6 588 aa31.84■■■□□ 2.69
SH3GL3-202ENST00000427482 PSMA5P28066 241 aa31.84■■■□□ 2.69
SH3GL3-202ENST00000427482 AK2P54819 239 aa31.84■■■□□ 2.69
SH3GL3-202ENST00000427482 VPS53Q5VIR6 699 aa31.84■■■□□ 2.69
SH3GL3-202ENST00000427482 RUFY3Q7L099 469 aa31.84■■■□□ 2.69
SH3GL3-202ENST00000427482 PROM2Q8N271 834 aa31.84■■■□□ 2.69
SH3GL3-202ENST00000427482 ZGPATQ8N5A5 531 aaKnown RBP31.84■■■□□ 2.69
SH3GL3-202ENST00000427482 OSBP2Q969R2 916 aa31.84■■■□□ 2.69
SH3GL3-202ENST00000427482 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.84■■■□□ 2.69
SH3GL3-202ENST00000427482 CPA1P15085 419 aa31.84■■■□□ 2.69
SH3GL3-202ENST00000427482 CCDC24Q8N4L8 307 aa31.83■■■□□ 2.69
SH3GL3-202ENST00000427482 APPBP2Q92624 585 aa31.83■■■□□ 2.69
SH3GL3-202ENST00000427482 GYS1P13807 737 aa31.82■■■□□ 2.68
SH3GL3-202ENST00000427482 ZSCAN25Q6NSZ9 544 aa31.82■■■□□ 2.68
SH3GL3-202ENST00000427482 PIH1D3Q9NQM4 214 aaKnown RBP31.82■■■□□ 2.68
SH3GL3-202ENST00000427482 PDRG1Q9NUG6 133 aa31.82■■■□□ 2.68
SH3GL3-202ENST00000427482 TAF6LQ9Y6J9 622 aa31.82■■■□□ 2.68
SH3GL3-202ENST00000427482 INTS4Q96HW7 963 aaKnown RBP31.82■■■□□ 2.68
SH3GL3-202ENST00000427482 MINPP1Q9UNW1 487 aa31.82■■■□□ 2.68
SH3GL3-202ENST00000427482 LAMA4Q16363 1823 aa31.81■■■□□ 2.68
SH3GL3-202ENST00000427482 RXRBP28702 533 aa31.81■■■□□ 2.68
SH3GL3-202ENST00000427482 SPATA5Q8NB90 893 aa31.81■■■□□ 2.68
SH3GL3-202ENST00000427482 NPHP1O15259 732 aa31.8■■■□□ 2.68
SH3GL3-202ENST00000427482 RPS8P62241 208 aaKnown RBP31.8■■■□□ 2.68
SH3GL3-202ENST00000427482 RASGRF1Q13972 1273 aa31.8■■■□□ 2.68
SH3GL3-202ENST00000427482 KRT32Q14532 448 aa31.8■■■□□ 2.68
SH3GL3-202ENST00000427482 WASHC4Q2M389 1173 aa31.8■■■□□ 2.68
SH3GL3-202ENST00000427482 CNBD1Q8NA66 436 aa31.8■■■□□ 2.68
SH3GL3-202ENST00000427482 PLSCR1O15162 318 aa31.79■■■□□ 2.68
SH3GL3-202ENST00000427482 HSPD1P10809 573 aaKnown RBP31.79■■■□□ 2.68
SH3GL3-202ENST00000427482 ADD2P35612 726 aa31.79■■■□□ 2.68
SH3GL3-202ENST00000427482 UBE4AQ14139 1066 aa31.79■■■□□ 2.68
SH3GL3-202ENST00000427482 TNPO1Q92973 898 aaKnown RBP31.79■■■□□ 2.68
SH3GL3-202ENST00000427482 LIMCH1Q9UPQ0 1083 aa31.79■■■□□ 2.68
SH3GL3-202ENST00000427482 TNS1Q9HBL0 1735 aaKnown RBP31.79■■■□□ 2.68
SH3GL3-202ENST00000427482 TM4SF1P30408 202 aa31.79■■■□□ 2.68
SH3GL3-202ENST00000427482 CYP21A2P08686 494 aa31.78■■■□□ 2.68
SH3GL3-202ENST00000427482 BCAMP50895 628 aa31.78■■■□□ 2.68
SH3GL3-202ENST00000427482 BLOC1S2Q6QNY1 142 aa31.77■■■□□ 2.68
SH3GL3-202ENST00000427482 NUCB2P80303 420 aa31.77■■■□□ 2.68
SH3GL3-202ENST00000427482 MCM4P33991 863 aa31.76■■■□□ 2.67
SH3GL3-202ENST00000427482 UBE3CQ15386 1083 aa31.76■■■□□ 2.67
SH3GL3-202ENST00000427482 PUS7LQ9H0K6 701 aaKnown RBP31.76■■■□□ 2.67
SH3GL3-202ENST00000427482 ZNF804BA4D1E1 1349 aa31.76■■■□□ 2.67
SH3GL3-202ENST00000427482 IDH1O75874 414 aaKnown RBP31.75■■■□□ 2.67
SH3GL3-202ENST00000427482 RPS6KB1P23443 525 aa31.75■■■□□ 2.67
SH3GL3-202ENST00000427482 SLC9C2Q5TAH2 1124 aa31.75■■■□□ 2.67
SH3GL3-202ENST00000427482 PRR5LQ6MZQ0 368 aa31.75■■■□□ 2.67
SH3GL3-202ENST00000427482 ALDH8A1Q9H2A2 487 aaPredicted RBP31.75■■■□□ 2.67
SH3GL3-202ENST00000427482 RGPD3A6NKT7 1758 aaPredicted RBP31.75■■■□□ 2.67
SH3GL3-202ENST00000427482 RGPD4Q7Z3J3 1758 aa31.75■■■□□ 2.67
SH3GL3-202ENST00000427482 APBA3O96018 575 aa31.74■■■□□ 2.67
SH3GL3-202ENST00000427482 COL9A3Q14050 684 aaPredicted RBP31.74■■■□□ 2.67
SH3GL3-202ENST00000427482 MYH13Q9UKX3 1938 aa31.73■■■□□ 2.67
SH3GL3-202ENST00000427482 PDE6AP16499 860 aa31.73■■■□□ 2.67
SH3GL3-202ENST00000427482 FOXP2O15409 715 aa31.72■■■□□ 2.67
SH3GL3-202ENST00000427482 ANKRD2Q9GZV1 360 aa31.72■■■□□ 2.67
SH3GL3-202ENST00000427482 WWC3Q9ULE0 1092 aa31.72■■■□□ 2.67
SH3GL3-202ENST00000427482 TCRBV5S4A2TA0A5A2 114 aa31.72■■■□□ 2.67
SH3GL3-202ENST00000427482 GPAA1O43292 621 aa31.72■■■□□ 2.67
SH3GL3-202ENST00000427482 ZSCAN31Q96LW9 406 aaPredicted RBP31.72■■■□□ 2.67
SH3GL3-202ENST00000427482 NEK1Q96PY6 1258 aa31.72■■■□□ 2.67
SH3GL3-202ENST00000427482 SERPINB2P05120 415 aa31.71■■■□□ 2.67
SH3GL3-202ENST00000427482 LARP6Q9BRS8 491 aaKnown RBP31.71■■■□□ 2.67
SH3GL3-202ENST00000427482 ZNF532Q9HCE3 1301 aa31.71■■■□□ 2.67
SH3GL3-202ENST00000427482 ZNF827Q17R98 1081 aa31.7■■■□□ 2.67
SH3GL3-202ENST00000427482 SH2B1Q9NRF2 756 aaPredicted RBP31.7■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms