RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 CDC25BP30305 580 aa9.47□□□□□ -0.89
LINC00458-202ENST00000427299 NCAPG2Q86XI2 1143 aa9.47□□□□□ -0.89
LINC00458-202ENST00000427299 FOXD4L4Q8WXT5 416 aaPredicted RBP9.47□□□□□ -0.89
LINC00458-202ENST00000427299 FAM46AQ96IP4 442 aaKnown RBP9.47□□□□□ -0.89
LINC00458-202ENST00000427299 ADAM19Q9H013 955 aa9.47□□□□□ -0.89
LINC00458-202ENST00000427299 ELP3Q9H9T3 547 aa9.47□□□□□ -0.89
LINC00458-202ENST00000427299 SH2B1Q9NRF2 756 aaPredicted RBP9.47□□□□□ -0.89
LINC00458-202ENST00000427299 KIAA1324LA8MWY0 1029 aaPredicted RBP9.46□□□□□ -0.9
LINC00458-202ENST00000427299 ADAM11O75078 769 aa9.46□□□□□ -0.9
LINC00458-202ENST00000427299 MED26O95402 600 aa9.46□□□□□ -0.9
LINC00458-202ENST00000427299 PTPRAP18433 802 aa9.46□□□□□ -0.9
LINC00458-202ENST00000427299 NUDT16Q96DE0 195 aaKnown RBP9.46□□□□□ -0.9
LINC00458-202ENST00000427299 POP1Q99575 1024 aaKnown RBP9.46□□□□□ -0.9
LINC00458-202ENST00000427299 TGFB1P01137 390 aa9.45□□□□□ -0.9
LINC00458-202ENST00000427299 FAM117BQ6P1L5 589 aa9.45□□□□□ -0.9
LINC00458-202ENST00000427299 ZDHHC13Q8IUH4 622 aa9.45□□□□□ -0.9
LINC00458-202ENST00000427299 UTP4Q969X6 686 aaKnown RBP9.45□□□□□ -0.9
LINC00458-202ENST00000427299 GOLGA2P5Q9HBQ8 144 aa9.45□□□□□ -0.9
LINC00458-202ENST00000427299 CNTN3Q9P232 1028 aa9.45□□□□□ -0.9
LINC00458-202ENST00000427299 SEPT3Q9UH03 358 aa9.45□□□□□ -0.9
LINC00458-202ENST00000427299 BTBD11A6QL63 1104 aa9.44□□□□□ -0.9
LINC00458-202ENST00000427299 DDX3YO15523 660 aaKnown RBP9.44□□□□□ -0.9
LINC00458-202ENST00000427299 NFIAQ12857 509 aa9.44□□□□□ -0.9
LINC00458-202ENST00000427299 DUOXA2Q1HG44 320 aa9.44□□□□□ -0.9
LINC00458-202ENST00000427299 ATCAYQ86WG3 371 aa9.44□□□□□ -0.9
LINC00458-202ENST00000427299 UBASH3BQ8TF42 649 aa9.44□□□□□ -0.9
LINC00458-202ENST00000427299 MYRFLQ96LU7 910 aa9.44□□□□□ -0.9
LINC00458-202ENST00000427299 C7orf69Q9H7B7 122 aa9.44□□□□□ -0.9
LINC00458-202ENST00000427299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.44□□□□□ -0.9
LINC00458-202ENST00000427299 ATP2B4P23634 1241 aa9.43□□□□□ -0.9
LINC00458-202ENST00000427299 ZNF438Q7Z4V0 828 aa9.43□□□□□ -0.9
LINC00458-202ENST00000427299 PBXIP1Q96AQ6 731 aa9.43□□□□□ -0.9
LINC00458-202ENST00000427299 KLHDC7BQ96G42 594 aa9.43□□□□□ -0.9
LINC00458-202ENST00000427299 SEC31BQ9NQW1 1179 aa9.43□□□□□ -0.9
LINC00458-202ENST00000427299 KANSL3Q9P2N6 904 aa9.43□□□□□ -0.9
LINC00458-202ENST00000427299 SALL4Q9UJQ4 1053 aa9.43□□□□□ -0.9
LINC00458-202ENST00000427299 COL17A1Q9UMD9 1497 aaPredicted RBP9.42□□□□□ -0.9
LINC00458-202ENST00000427299 H3BRJ5 948 aa9.42□□□□□ -0.9
LINC00458-202ENST00000427299 NFKBIEO00221 500 aa9.42□□□□□ -0.9
LINC00458-202ENST00000427299 COBLO75128 1261 aa9.42□□□□□ -0.9
LINC00458-202ENST00000427299 TRIM42Q8IWZ5 723 aa9.42□□□□□ -0.9
LINC00458-202ENST00000427299 WNT8BQ93098 351 aa9.42□□□□□ -0.9
LINC00458-202ENST00000427299 ACPPP15309 386 aa9.41□□□□□ -0.9
LINC00458-202ENST00000427299 PIP4K2BP78356 416 aa9.41□□□□□ -0.9
LINC00458-202ENST00000427299 RNF43Q68DV7 783 aa9.41□□□□□ -0.9
LINC00458-202ENST00000427299 XKR5Q6UX68 686 aa9.41□□□□□ -0.9
LINC00458-202ENST00000427299 TIMELESSQ9UNS1 1208 aa9.41□□□□□ -0.9
LINC00458-202ENST00000427299 HMX2A2RU54 273 aa9.4□□□□□ -0.9
LINC00458-202ENST00000427299 RPLP1P05386 114 aaKnown RBP9.4□□□□□ -0.9
LINC00458-202ENST00000427299 FAM20CQ8IXL6 584 aa9.4□□□□□ -0.9
LINC00458-202ENST00000427299 C1orf127Q8N9H9 656 aa9.4□□□□□ -0.9
LINC00458-202ENST00000427299 HELQQ8TDG4 1101 aa9.4□□□□□ -0.9
LINC00458-202ENST00000427299 ZMYND15Q9H091 742 aa9.4□□□□□ -0.9
LINC00458-202ENST00000427299 DZANK1Q9NVP4 752 aa9.4□□□□□ -0.9
LINC00458-202ENST00000427299 FAM177BA6PVY3 158 aa9.39□□□□□ -0.91
LINC00458-202ENST00000427299 SPINK2P20155 84 aa9.39□□□□□ -0.91
LINC00458-202ENST00000427299 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.39□□□□□ -0.91
LINC00458-202ENST00000427299 DBNDD2Q9BQY9 259 aa9.39□□□□□ -0.91
LINC00458-202ENST00000427299 OSGEPQ9NPF4 335 aa9.39□□□□□ -0.91
LINC00458-202ENST00000427299 PRR19A6NJB7 356 aa9.38□□□□□ -0.91
LINC00458-202ENST00000427299 CES1P23141 567 aa9.38□□□□□ -0.91
LINC00458-202ENST00000427299 CABP4P57796 275 aa9.38□□□□□ -0.91
LINC00458-202ENST00000427299 ANKRD34AQ69YU3 496 aa9.38□□□□□ -0.91
LINC00458-202ENST00000427299 EDEM1Q92611 657 aa9.38□□□□□ -0.91
LINC00458-202ENST00000427299 HHIPQ96QV1 700 aa9.38□□□□□ -0.91
LINC00458-202ENST00000427299 CHRDQ9H2X0 955 aa9.38□□□□□ -0.91
LINC00458-202ENST00000427299 PDE2AO00408 941 aaPredicted RBP9.37□□□□□ -0.91
LINC00458-202ENST00000427299 PDGFAP04085 211 aa9.37□□□□□ -0.91
LINC00458-202ENST00000427299 PREPP48147 710 aa9.37□□□□□ -0.91
LINC00458-202ENST00000427299 CLEC10AQ8IUN9 316 aa9.37□□□□□ -0.91
LINC00458-202ENST00000427299 FAM83CQ9BQN1 747 aa9.37□□□□□ -0.91
LINC00458-202ENST00000427299 RNF208Q9H0X6 261 aa9.37□□□□□ -0.91
LINC00458-202ENST00000427299 GGNBP2Q9H3C7 697 aa9.37□□□□□ -0.91
LINC00458-202ENST00000427299 SOX13Q9UN79 622 aa9.37□□□□□ -0.91
LINC00458-202ENST00000427299 OAS3Q9Y6K5 1087 aaKnown RBP9.37□□□□□ -0.91
LINC00458-202ENST00000427299 KRTAP4-8A0A0G2JLE6 195 aa9.36□□□□□ -0.91
LINC00458-202ENST00000427299 ADAMTS4O75173 837 aa9.36□□□□□ -0.91
LINC00458-202ENST00000427299 GP2P55259 537 aaKnown RBP9.36□□□□□ -0.91
LINC00458-202ENST00000427299 NLRP12P59046 1061 aa9.36□□□□□ -0.91
LINC00458-202ENST00000427299 DNM1Q05193 864 aaKnown RBP9.36□□□□□ -0.91
LINC00458-202ENST00000427299 INTS5Q6P9B9 1019 aaKnown RBP9.36□□□□□ -0.91
LINC00458-202ENST00000427299 A6NHS1 94 aa9.35□□□□□ -0.91
LINC00458-202ENST00000427299 TRPA1O75762 1119 aa9.35□□□□□ -0.91
LINC00458-202ENST00000427299 BMP3P12645 472 aa9.35□□□□□ -0.91
LINC00458-202ENST00000427299 ERICH6Q7L0X2 663 aa9.35□□□□□ -0.91
LINC00458-202ENST00000427299 PCSK2P16519 638 aa9.34□□□□□ -0.91
LINC00458-202ENST00000427299 MZF1P28698 734 aaPredicted RBP9.34□□□□□ -0.91
LINC00458-202ENST00000427299 GRIK1P39086 918 aa9.34□□□□□ -0.91
LINC00458-202ENST00000427299 NOM1Q5C9Z4 860 aaKnown RBP9.34□□□□□ -0.91
LINC00458-202ENST00000427299 BEND4Q6ZU67 534 aa9.34□□□□□ -0.91
LINC00458-202ENST00000427299 DTX1Q86Y01 620 aa9.34□□□□□ -0.91
LINC00458-202ENST00000427299 TMEM102Q8N9M5 508 aaPredicted RBP9.34□□□□□ -0.91
LINC00458-202ENST00000427299 RUSC1Q9BVN2 902 aa9.34□□□□□ -0.91
LINC00458-202ENST00000427299 HIF3AQ9Y2N7 669 aa9.34□□□□□ -0.91
LINC00458-202ENST00000427299 SART1O43290 800 aaKnown RBP9.33□□□□□ -0.92
LINC00458-202ENST00000427299 EIF1AXP47813 144 aaKnown RBP9.33□□□□□ -0.92
LINC00458-202ENST00000427299 IRAK1P51617 712 aa9.33□□□□□ -0.92
LINC00458-202ENST00000427299 HGSNATQ68CP4 663 aa9.33□□□□□ -0.92
LINC00458-202ENST00000427299 SHKBP1Q8TBC3 707 aa9.33□□□□□ -0.92
LINC00458-202ENST00000427299 SLC7A3Q8WY07 619 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms