RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 EXOC1Q9NV70 894 aa11.65□□□□□ -0.54
SP1-202ENST00000426431 GGA1Q9UJY5 639 aa11.65□□□□□ -0.54
SP1-202ENST00000426431 NEFHP12036 1026 aa11.65□□□□□ -0.54
SP1-202ENST00000426431 ALG1Q9BT22 464 aa11.65□□□□□ -0.54
SP1-202ENST00000426431 SMARCC2Q8TAQ2 1214 aa11.65□□□□□ -0.54
SP1-202ENST00000426431 PLVAPQ9BX97 442 aa11.65□□□□□ -0.54
SP1-202ENST00000426431 TMEM87AQ8NBN3 555 aa11.65□□□□□ -0.54
SP1-202ENST00000426431 TNPO1Q92973 898 aaKnown RBP11.65□□□□□ -0.54
SP1-202ENST00000426431 INTS4Q96HW7 963 aaKnown RBP11.65□□□□□ -0.54
SP1-202ENST00000426431 TMEM87BQ96K49 555 aa11.65□□□□□ -0.54
SP1-202ENST00000426431 MAGI3Q5TCQ9 1506 aa11.65□□□□□ -0.54
SP1-202ENST00000426431 CCDC40Q4G0X9 1142 aa11.65□□□□□ -0.54
SP1-202ENST00000426431 USP21Q9UK80 565 aa11.65□□□□□ -0.54
SP1-202ENST00000426431 H0YIN7 160 aa11.65□□□□□ -0.55
SP1-202ENST00000426431 ZSCAN22P10073 491 aaPredicted RBP11.65□□□□□ -0.55
SP1-202ENST00000426431 MTIF2P46199 727 aaKnown RBP11.65□□□□□ -0.55
SP1-202ENST00000426431 SYCP3Q8IZU3 236 aa11.65□□□□□ -0.55
SP1-202ENST00000426431 BRF1Q92994 677 aa11.65□□□□□ -0.55
SP1-202ENST00000426431 UBA5Q9GZZ9 404 aa11.65□□□□□ -0.55
SP1-202ENST00000426431 PRKCSHP14314 528 aaPredicted RBP11.64□□□□□ -0.55
SP1-202ENST00000426431 ALS2CR12Q96Q35 445 aa11.64□□□□□ -0.55
SP1-202ENST00000426431 ZMYM4Q5VZL5 1548 aa11.64□□□□□ -0.55
SP1-202ENST00000426431 SAMM50Q9Y512 469 aa11.64□□□□□ -0.55
SP1-202ENST00000426431 GOLGA6L7A0A1B0GV03 622 aa11.64□□□□□ -0.55
SP1-202ENST00000426431 SSFA2P28290 1259 aa11.64□□□□□ -0.55
SP1-202ENST00000426431 DHX32Q7L7V1 743 aaKnown RBP11.64□□□□□ -0.55
SP1-202ENST00000426431 LZTS2Q9BRK4 669 aa11.64□□□□□ -0.55
SP1-202ENST00000426431 TAOK3Q9H2K8 898 aa11.64□□□□□ -0.55
SP1-202ENST00000426431 ZRANB1Q9UGI0 708 aa11.64□□□□□ -0.55
SP1-202ENST00000426431 DKC1O60832 514 aaKnown RBP eCLIP11.64□□□□□ -0.551e-24■■■■■ 40.1
SP1-202ENST00000426431 HIBADHP31937 336 aaKnown RBP11.64□□□□□ -0.55
SP1-202ENST00000426431 ORAI2Q96SN7 254 aa11.64□□□□□ -0.55
SP1-202ENST00000426431 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
SP1-202ENST00000426431 NAPAP54920 295 aa11.64□□□□□ -0.55
SP1-202ENST00000426431 HAND2P61296 217 aa11.64□□□□□ -0.55
SP1-202ENST00000426431 MCM9Q9NXL9 1143 aa11.64□□□□□ -0.55
SP1-202ENST00000426431 TRIM75PA6NK02 468 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 PRC1O43663 620 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 FILIP1Q7Z7B0 1213 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 NAA15Q9BXJ9 866 aaKnown RBP11.63□□□□□ -0.55
SP1-202ENST00000426431 TBC1D2Q9BYX2 928 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 TUBB4AP04350 444 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 PAFAH1B1P43034 410 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 TMC4Q7Z404 712 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 LPIN2Q92539 896 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 ARHGEF10LQ9HCE6 1279 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 EIF6P56537 245 aaKnown RBP11.63□□□□□ -0.55
SP1-202ENST00000426431 AXDND1Q5T1B0 1012 aaPredicted RBP11.63□□□□□ -0.55
SP1-202ENST00000426431 PHACTR3Q96KR7 559 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 TTC37Q6PGP7 1564 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 MCTP2Q6DN12 878 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 CCDC82Q8N4S0 544 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 LRRC45Q96CN5 670 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 TTC12Q9H892 705 aaPredicted RBP11.63□□□□□ -0.55
SP1-202ENST00000426431 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.63□□□□□ -0.556e-6■□□□□ 9.8
SP1-202ENST00000426431 SYKP43405 635 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 LEKR1Q6ZMV7 388 aa11.63□□□□□ -0.55
SP1-202ENST00000426431 ARHGAP31Q2M1Z3 1444 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 PRPHP41219 470 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 SYCE3A1L190 88 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 IDEP14735 1019 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 VAT1LQ9HCJ6 419 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 KRT13P13646 458 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 BICC1Q9H694 974 aaKnown RBP11.62□□□□□ -0.55
SP1-202ENST00000426431 ERVK-7P63135 1459 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 TBC1D5Q92609 795 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 DRC1Q96MC2 740 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 ANKARQ7Z5J8 1434 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 PSMA7O14818 248 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 KLHL10Q6JEL2 608 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 MAGEB6Q8N7X4 407 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 TMX3Q96JJ7 454 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 STAT6P42226 847 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 NMIQ13287 307 aaPredicted RBP11.62□□□□□ -0.55
SP1-202ENST00000426431 KIF18AQ8NI77 898 aa11.62□□□□□ -0.55
SP1-202ENST00000426431 TRPC5Q9UL62 973 aaPredicted RBP11.62□□□□□ -0.55
SP1-202ENST00000426431 ITGA6P23229 1130 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 KRT2P35908 639 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 KRT79Q5XKE5 535 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 ZNF772Q68DY9 489 aaPredicted RBP11.61□□□□□ -0.55
SP1-202ENST00000426431 LLPHQ9BRT6 129 aaKnown RBP11.61□□□□□ -0.55
SP1-202ENST00000426431 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 IBTKQ9P2D0 1353 aaPredicted RBP11.61□□□□□ -0.55
SP1-202ENST00000426431 CCDC66A2RUB6 948 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 TFCP2Q12800 502 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 KLHL40Q2TBA0 621 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 APPBP2Q92624 585 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 NUP88Q99567 741 aaPredicted RBP11.61□□□□□ -0.55
SP1-202ENST00000426431 KCNG1Q9UIX4 513 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 MRPS27Q92552 414 aaKnown RBP11.61□□□□□ -0.55
SP1-202ENST00000426431 TET3O43151 1660 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 BICDL2A1A5D9 508 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 SSR1P43307 286 aaKnown RBP11.61□□□□□ -0.55
SP1-202ENST00000426431 BRDTQ58F21 947 aaPredicted RBP11.61□□□□□ -0.55
SP1-202ENST00000426431 FBLN1P23142 703 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 HEATR3Q7Z4Q2 680 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 ZSCAN30Q86W11 494 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 SYNMO15061 1565 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 UFL1O94874 794 aa11.61□□□□□ -0.55
SP1-202ENST00000426431 GUCY1B3Q02153 619 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms