RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 TAF5LO75529 589 aa23.17■■□□□ 1.3
MSH5-207ENST00000425703 UBTFL1P0CB47 393 aaPredicted RBP23.17■■□□□ 1.3
MSH5-207ENST00000425703 HIRAP54198 1017 aaPredicted RBP23.17■■□□□ 1.3
MSH5-207ENST00000425703 STRIP1Q5VSL9 837 aa23.17■■□□□ 1.3
MSH5-207ENST00000425703 HELBQ8NG08 1087 aaPredicted RBP23.17■■□□□ 1.3
MSH5-207ENST00000425703 SCN9AQ15858 1988 aa23.17■■□□□ 1.3
MSH5-207ENST00000425703 MROH5Q6ZUA9 1318 aa23.16■■□□□ 1.3
MSH5-207ENST00000425703 BCAR3O75815 825 aa23.16■■□□□ 1.3
MSH5-207ENST00000425703 ATF7IPQ6VMQ6 1270 aa23.16■■□□□ 1.3
MSH5-207ENST00000425703 TRPM4Q8TD43 1214 aa23.16■■□□□ 1.3
MSH5-207ENST00000425703 GMLQ99445 158 aa23.16■■□□□ 1.3
MSH5-207ENST00000425703 RIPOR2Q9Y4F9 1068 aa23.16■■□□□ 1.3
MSH5-207ENST00000425703 MYO3BQ8WXR4 1341 aa23.15■■□□□ 1.3
MSH5-207ENST00000425703 SHTN1A0MZ66 631 aa23.15■■□□□ 1.3
MSH5-207ENST00000425703 TMEM88BA6NKF7 163 aa23.15■■□□□ 1.3
MSH5-207ENST00000425703 TRIM27P14373 513 aa23.15■■□□□ 1.3
MSH5-207ENST00000425703 KLRK1P26718 216 aa23.15■■□□□ 1.3
MSH5-207ENST00000425703 MMP14P50281 582 aa23.15■■□□□ 1.3
MSH5-207ENST00000425703 ZNF280AP59817 542 aaPredicted RBP23.15■■□□□ 1.3
MSH5-207ENST00000425703 UBE4AQ14139 1066 aa23.14■■□□□ 1.29
MSH5-207ENST00000425703 DACT2Q5SW24 774 aa23.14■■□□□ 1.29
MSH5-207ENST00000425703 SAMD7Q7Z3H4 446 aa23.14■■□□□ 1.29
MSH5-207ENST00000425703 SNAP23O00161 211 aa23.13■■□□□ 1.29
MSH5-207ENST00000425703 USP17L8P0C7I0 530 aa23.13■■□□□ 1.29
MSH5-207ENST00000425703 ZNF804AQ7Z570 1209 aa23.13■■□□□ 1.29
MSH5-207ENST00000425703 PUS3Q9BZE2 481 aaKnown RBP23.13■■□□□ 1.29
MSH5-207ENST00000425703 CD209Q9NNX6 404 aa23.13■■□□□ 1.29
MSH5-207ENST00000425703 PSME4Q14997 1843 aa23.12■■□□□ 1.29
MSH5-207ENST00000425703 TBC1D10BQ4KMP7 808 aaPredicted RBP23.12■■□□□ 1.29
MSH5-207ENST00000425703 JMYQ8N9B5 988 aa23.12■■□□□ 1.29
MSH5-207ENST00000425703 FRAT1Q92837 279 aaPredicted RBP23.12■■□□□ 1.29
MSH5-207ENST00000425703 PLIN1O60240 522 aa23.11■■□□□ 1.29
MSH5-207ENST00000425703 GNAI3P08754 354 aa23.11■■□□□ 1.29
MSH5-207ENST00000425703 IL1R1P14778 569 aa23.11■■□□□ 1.29
MSH5-207ENST00000425703 RFX5P48382 616 aaPredicted RBP23.11■■□□□ 1.29
MSH5-207ENST00000425703 KIF4BQ2VIQ3 1234 aa23.11■■□□□ 1.29
MSH5-207ENST00000425703 ZKSCAN2Q63HK3 967 aa23.11■■□□□ 1.29
MSH5-207ENST00000425703 TTLL5Q6EMB2 1281 aa23.11■■□□□ 1.29
MSH5-207ENST00000425703 CDC37L1Q7L3B6 337 aa23.11■■□□□ 1.29
MSH5-207ENST00000425703 FBXO3Q9UK99 471 aa23.11■■□□□ 1.29
MSH5-207ENST00000425703 MEIS3Q99687 375 aa23.1■■□□□ 1.29
MSH5-207ENST00000425703 EGFRP00533 1210 aa23.09■■□□□ 1.29
MSH5-207ENST00000425703 LRRC24Q50LG9 513 aa23.09■■□□□ 1.29
MSH5-207ENST00000425703 OGFOD1Q8N543 542 aa23.09■■□□□ 1.29
MSH5-207ENST00000425703 LRRFIP2Q9Y608 721 aaKnown RBP23.09■■□□□ 1.29
MSH5-207ENST00000425703 A0A1B0GUL6 1792 aa23.09■■□□□ 1.29
MSH5-207ENST00000425703 EYA2O00167 538 aa23.08■■□□□ 1.29
MSH5-207ENST00000425703 PDE8BO95263 885 aa23.08■■□□□ 1.29
MSH5-207ENST00000425703 PTPN12Q05209 780 aaKnown RBP23.08■■□□□ 1.29
MSH5-207ENST00000425703 METTL24Q5JXM2 366 aa23.08■■□□□ 1.29
MSH5-207ENST00000425703 VGLL2Q8N8G2 317 aa23.08■■□□□ 1.29
MSH5-207ENST00000425703 MYOZ2Q9NPC6 264 aa23.08■■□□□ 1.29
MSH5-207ENST00000425703 TRAF5O00463 557 aa23.07■■□□□ 1.28
MSH5-207ENST00000425703 GTF2IP78347 998 aa23.07■■□□□ 1.28
MSH5-207ENST00000425703 RBM26Q5T8P6 1007 aaKnown RBP23.07■■□□□ 1.28
MSH5-207ENST00000425703 KLHDC4Q8TBB5 520 aa23.07■■□□□ 1.28
MSH5-207ENST00000425703 FBXW7Q969H0 707 aa23.07■■□□□ 1.28
MSH5-207ENST00000425703 GLIS2Q9BZE0 524 aaPredicted RBP23.07■■□□□ 1.28
MSH5-207ENST00000425703 CNTNAP1P78357 1384 aa23.06■■□□□ 1.28
MSH5-207ENST00000425703 CIAO1O76071 339 aa23.06■■□□□ 1.28
MSH5-207ENST00000425703 SASH1O94885 1247 aa23.06■■□□□ 1.28
MSH5-207ENST00000425703 FKBP1AP62942 108 aaKnown RBP23.06■■□□□ 1.28
MSH5-207ENST00000425703 DCPSQ96C86 337 aaKnown RBP23.06■■□□□ 1.28
MSH5-207ENST00000425703 FAM84BQ96KN1 310 aaPredicted RBP23.06■■□□□ 1.28
MSH5-207ENST00000425703 RASSF10A6NK89 507 aa23.05■■□□□ 1.28
MSH5-207ENST00000425703 HIBADHP31937 336 aaKnown RBP23.05■■□□□ 1.28
MSH5-207ENST00000425703 MTX1Q13505 466 aa23.05■■□□□ 1.28
MSH5-207ENST00000425703 CST9Q5W186 159 aa23.05■■□□□ 1.28
MSH5-207ENST00000425703 CLUAP1Q96AJ1 413 aa23.05■■□□□ 1.28
MSH5-207ENST00000425703 MXD3Q9BW11 206 aa23.05■■□□□ 1.28
MSH5-207ENST00000425703 SCARF1Q14162 830 aa23.04■■□□□ 1.28
MSH5-207ENST00000425703 KRT26Q7Z3Y9 468 aa23.04■■□□□ 1.28
MSH5-207ENST00000425703 TDRD7Q8NHU6 1098 aaKnown RBP23.04■■□□□ 1.28
MSH5-207ENST00000425703 HDAC9Q9UKV0 1011 aa23.04■■□□□ 1.28
MSH5-207ENST00000425703 TNNQ9UQP3 1299 aa23.04■■□□□ 1.28
MSH5-207ENST00000425703 FMR1Q06787 632 aaKnown RBP eCLIP23.03■■□□□ 1.28
MSH5-207ENST00000425703 PUM3Q15397 648 aaKnown RBP23.03■■□□□ 1.28
MSH5-207ENST00000425703 ATG9AQ7Z3C6 839 aa23.03■■□□□ 1.28
MSH5-207ENST00000425703 FBXO33Q7Z6M2 555 aa23.03■■□□□ 1.28
MSH5-207ENST00000425703 USP48Q86UV5 1035 aa23.03■■□□□ 1.28
MSH5-207ENST00000425703 COPRSQ9NQ92 184 aa23.03■■□□□ 1.28
MSH5-207ENST00000425703 GGA3Q9NZ52 723 aa23.03■■□□□ 1.28
MSH5-207ENST00000425703 MKRN1Q9UHC7 482 aaKnown RBP23.03■■□□□ 1.28
MSH5-207ENST00000425703 FAM205AQ6ZU69 1335 aa23.03■■□□□ 1.28
MSH5-207ENST00000425703 PITPNM2Q9BZ72 1349 aa23.03■■□□□ 1.28
MSH5-207ENST00000425703 ZNF646O15015 1829 aaPredicted RBP23.03■■□□□ 1.28
MSH5-207ENST00000425703 CELF2O95319 508 aaKnown RBP23.02■■□□□ 1.28
MSH5-207ENST00000425703 GNAI2P04899 355 aa23.02■■□□□ 1.28
MSH5-207ENST00000425703 FGFR2P21802 821 aa23.02■■□□□ 1.28
MSH5-207ENST00000425703 GYG1P46976 350 aa23.02■■□□□ 1.28
MSH5-207ENST00000425703 CAVIN4Q5BKX8 364 aa23.02■■□□□ 1.28
MSH5-207ENST00000425703 SULF1Q8IWU6 871 aa23.02■■□□□ 1.28
MSH5-207ENST00000425703 TMEM57Q8N5G2 664 aa23.02■■□□□ 1.28
MSH5-207ENST00000425703 ABT1Q9ULW3 272 aaKnown RBP23.02■■□□□ 1.28
MSH5-207ENST00000425703 IFIT1P09914 478 aaKnown RBP23.01■■□□□ 1.27
MSH5-207ENST00000425703 IL15P40933 162 aaPredicted RBP23.01■■□□□ 1.27
MSH5-207ENST00000425703 DEFB115Q30KQ5 88 aa23.01■■□□□ 1.27
MSH5-207ENST00000425703 VPS37DQ86XT2 251 aa23.01■■□□□ 1.27
MSH5-207ENST00000425703 KIAA0825Q8IV33 1275 aa23.01■■□□□ 1.27
MSH5-207ENST00000425703 FTSJ3Q8IY81 847 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms