RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 MED23Q9ULK4 1368 aa25.11■■□□□ 1.61
EGFR-204ENST00000420316 C15orf52Q6ZUT6 534 aaKnown RBP25.1■■□□□ 1.61
EGFR-204ENST00000420316 GLTPD2A6NH11 291 aa25.1■■□□□ 1.61
EGFR-204ENST00000420316 IRS2Q9Y4H2 1338 aa25.08■■□□□ 1.61
EGFR-204ENST00000420316 EIF6P56537 245 aaKnown RBP25.08■■□□□ 1.61
EGFR-204ENST00000420316 G3V3G9 751 aa25.07■■□□□ 1.6
EGFR-204ENST00000420316 FGFR2P21802 821 aa25.07■■□□□ 1.6
EGFR-204ENST00000420316 GYG1P46976 350 aa25.07■■□□□ 1.6
EGFR-204ENST00000420316 TIMM10P62072 90 aa25.07■■□□□ 1.6
EGFR-204ENST00000420316 PUM3Q15397 648 aaKnown RBP25.07■■□□□ 1.6
EGFR-204ENST00000420316 ATP2B3Q16720 1220 aa25.07■■□□□ 1.6
EGFR-204ENST00000420316 DCAF8Q5TAQ9 597 aa25.07■■□□□ 1.6
EGFR-204ENST00000420316 KCNQ5Q9NR82 932 aa25.07■■□□□ 1.6
EGFR-204ENST00000420316 KDM2BQ8NHM5 1336 aa25.07■■□□□ 1.6
EGFR-204ENST00000420316 ZNF784Q8NCA9 323 aaPredicted RBP25.06■■□□□ 1.6
EGFR-204ENST00000420316 IL1RAPL2Q9NP60 686 aa25.06■■□□□ 1.6
EGFR-204ENST00000420316 YDJCA8MPS7 323 aa25.05■■□□□ 1.6
EGFR-204ENST00000420316 ECE2O60344 883 aa25.05■■□□□ 1.6
EGFR-204ENST00000420316 ADORA1P30542 326 aa25.05■■□□□ 1.6
EGFR-204ENST00000420316 PODNQ7Z5L7 613 aa25.05■■□□□ 1.6
EGFR-204ENST00000420316 COA1Q9GZY4 146 aa25.05■■□□□ 1.6
EGFR-204ENST00000420316 ZNF541Q9H0D2 1346 aa25.05■■□□□ 1.6
EGFR-204ENST00000420316 IGHDP01880 384 aa25.05■■□□□ 1.6
EGFR-204ENST00000420316 CXCL9Q07325 125 aa25.05■■□□□ 1.6
EGFR-204ENST00000420316 SMARCA5O60264 1052 aaPredicted RBP25.04■■□□□ 1.6
EGFR-204ENST00000420316 NEFLP07196 543 aa25.04■■□□□ 1.6
EGFR-204ENST00000420316 AAMPQ13685 434 aa25.04■■□□□ 1.6
EGFR-204ENST00000420316 GPC2Q8N158 579 aa25.04■■□□□ 1.6
EGFR-204ENST00000420316 RHPN1Q8TCX5 695 aa25.04■■□□□ 1.6
EGFR-204ENST00000420316 NEUROD6Q96NK8 337 aa25.04■■□□□ 1.6
EGFR-204ENST00000420316 IQSEC3Q9UPP2 1182 aaPredicted RBP25.04■■□□□ 1.6
EGFR-204ENST00000420316 SCN9AQ15858 1988 aa25.04■■□□□ 1.6
EGFR-204ENST00000420316 A0A1B0GUL7 405 aa25.03■■□□□ 1.6
EGFR-204ENST00000420316 DDNO94850 711 aaPredicted RBP25.03■■□□□ 1.6
EGFR-204ENST00000420316 IFIT1P09914 478 aaKnown RBP25.03■■□□□ 1.6
EGFR-204ENST00000420316 SLC5A1P13866 664 aa25.03■■□□□ 1.6
EGFR-204ENST00000420316 BCAMP50895 628 aa25.03■■□□□ 1.6
EGFR-204ENST00000420316 LPIN2Q92539 896 aa25.03■■□□□ 1.6
EGFR-204ENST00000420316 FAM84BQ96KN1 310 aaPredicted RBP25.03■■□□□ 1.6
EGFR-204ENST00000420316 ZNF609O15014 1411 aa25.02■■□□□ 1.6
EGFR-204ENST00000420316 RAD17O75943 681 aa25.02■■□□□ 1.6
EGFR-204ENST00000420316 TNIP1Q15025 636 aa25.02■■□□□ 1.6
EGFR-204ENST00000420316 CIAPIN1Q6FI81 312 aa25.02■■□□□ 1.6
EGFR-204ENST00000420316 ZNF526Q8TF50 670 aaPredicted RBP25.02■■□□□ 1.6
EGFR-204ENST00000420316 DCTPP1Q9H773 170 aa25.02■■□□□ 1.6
EGFR-204ENST00000420316 HSP90AB4PQ58FF6 505 aa25.01■■□□□ 1.59
EGFR-204ENST00000420316 TNNI3KQ59H18 835 aa25.01■■□□□ 1.59
EGFR-204ENST00000420316 ZNF804AQ7Z570 1209 aa25.01■■□□□ 1.59
EGFR-204ENST00000420316 CCDC8Q9H0W5 538 aaPredicted RBP25.01■■□□□ 1.59
EGFR-204ENST00000420316 GPBP1L1Q9HC44 474 aaPredicted RBP25.01■■□□□ 1.59
EGFR-204ENST00000420316 JAG2Q9Y219 1238 aa25.01■■□□□ 1.59
EGFR-204ENST00000420316 FPGT-TNNI3KV9GXZ4 949 aa25.01■■□□□ 1.59
EGFR-204ENST00000420316 FBXW7Q969H0 707 aa25.01■■□□□ 1.59
EGFR-204ENST00000420316 CD209Q9NNX6 404 aa25.01■■□□□ 1.59
EGFR-204ENST00000420316 TLR7Q9NYK1 1049 aaKnown RBP25.01■■□□□ 1.59
EGFR-204ENST00000420316 ARAP2Q8WZ64 1704 aa25■■□□□ 1.59
EGFR-204ENST00000420316 HDAC1Q13547 482 aaPredicted RBP25■■□□□ 1.59
EGFR-204ENST00000420316 ERC1Q8IUD2 1116 aa25■■□□□ 1.59
EGFR-204ENST00000420316 EAF2Q96CJ1 260 aaPredicted RBP25■■□□□ 1.59
EGFR-204ENST00000420316 XAGE2Q96GT9 111 aa25■■□□□ 1.59
EGFR-204ENST00000420316 L3MBTL3Q96JM7 780 aaPredicted RBP25■■□□□ 1.59
EGFR-204ENST00000420316 AKAP2Q9Y2D5 859 aa25■■□□□ 1.59
EGFR-204ENST00000420316 GJA3Q9Y6H8 435 aa25■■□□□ 1.59
EGFR-204ENST00000420316 HIBADHP31937 336 aaKnown RBP24.99■■□□□ 1.59
EGFR-204ENST00000420316 KIF1BPQ96EK5 621 aa24.99■■□□□ 1.59
EGFR-204ENST00000420316 RAB11FIP3O75154 756 aa24.98■■□□□ 1.59
EGFR-204ENST00000420316 PHKA1P46020 1223 aa24.98■■□□□ 1.59
EGFR-204ENST00000420316 CAVIN4Q5BKX8 364 aa24.98■■□□□ 1.59
EGFR-204ENST00000420316 FBXO33Q7Z6M2 555 aa24.98■■□□□ 1.59
EGFR-204ENST00000420316 DBNDD2Q9BQY9 259 aa24.98■■□□□ 1.59
EGFR-204ENST00000420316 IL1R1P14778 569 aa24.97■■□□□ 1.59
EGFR-204ENST00000420316 AACSQ86V21 672 aa24.97■■□□□ 1.59
EGFR-204ENST00000420316 VPS37DQ86XT2 251 aa24.97■■□□□ 1.59
EGFR-204ENST00000420316 MXD3Q9BW11 206 aa24.97■■□□□ 1.59
EGFR-204ENST00000420316 RWDD1Q9H446 243 aaPredicted RBP24.97■■□□□ 1.59
EGFR-204ENST00000420316 PSMD14O00487 310 aa24.97■■□□□ 1.59
EGFR-204ENST00000420316 VIL1P09327 827 aaKnown RBP24.97■■□□□ 1.59
EGFR-204ENST00000420316 LRRCC1Q9C099 1032 aa24.97■■□□□ 1.59
EGFR-204ENST00000420316 USP17L3A6NCW0 530 aa24.96■■□□□ 1.59
EGFR-204ENST00000420316 USP17L4A6NCW7 530 aa24.96■■□□□ 1.59
EGFR-204ENST00000420316 VEGFAP15692 232 aaPredicted RBP24.96■■□□□ 1.59
EGFR-204ENST00000420316 B4GALNT3Q6L9W6 998 aa24.96■■□□□ 1.59
EGFR-204ENST00000420316 USP17L1Q7RTZ2 530 aa24.96■■□□□ 1.59
EGFR-204ENST00000420316 RRAGCQ9HB90 399 aa24.96■■□□□ 1.59
EGFR-204ENST00000420316 NMRK2Q9NPI5 230 aa24.96■■□□□ 1.59
EGFR-204ENST00000420316 GPR108Q9NPR9 543 aa24.96■■□□□ 1.59
EGFR-204ENST00000420316 POTECB2RU33 542 aa24.95■■□□□ 1.58
EGFR-204ENST00000420316 GTF2IP78347 998 aa24.95■■□□□ 1.58
EGFR-204ENST00000420316 STRIP1Q5VSL9 837 aa24.95■■□□□ 1.58
EGFR-204ENST00000420316 TDRD7Q8NHU6 1098 aaKnown RBP24.95■■□□□ 1.58
EGFR-204ENST00000420316 DBNLQ9UJU6 430 aaKnown RBP24.95■■□□□ 1.58
EGFR-204ENST00000420316 ZBTB12Q9Y330 459 aaPredicted RBP24.95■■□□□ 1.58
EGFR-204ENST00000420316 GORABQ5T7V8 394 aa24.94■■□□□ 1.58
EGFR-204ENST00000420316 CCDC102BQ68D86 513 aa24.94■■□□□ 1.58
EGFR-204ENST00000420316 ZNF646O15015 1829 aaPredicted RBP24.94■■□□□ 1.58
EGFR-204ENST00000420316 IQCA1LA6NCM1 817 aa24.93■■□□□ 1.58
EGFR-204ENST00000420316 FRAT2O75474 233 aaPredicted RBP24.93■■□□□ 1.58
EGFR-204ENST00000420316 CHAF1AQ13111 956 aaPredicted RBP24.93■■□□□ 1.58
EGFR-204ENST00000420316 TTLL5Q6EMB2 1281 aa24.93■■□□□ 1.58
EGFR-204ENST00000420316 CLASRPQ8N2M8 674 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms