RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 SASH1O94885 1247 aa8.5□□□□□ -1.05
CPS1-202ENST00000417946 CTSWP56202 376 aa8.5□□□□□ -1.05
CPS1-202ENST00000417946 BICDL1Q6ZP65 573 aa8.5□□□□□ -1.05
CPS1-202ENST00000417946 ATG9AQ7Z3C6 839 aa8.5□□□□□ -1.05
CPS1-202ENST00000417946 NPM2Q86SE8 214 aaKnown RBP8.5□□□□□ -1.05
CPS1-202ENST00000417946 CHD1LQ86WJ1 897 aa8.5□□□□□ -1.05
CPS1-202ENST00000417946 GREM2Q9H772 168 aa8.5□□□□□ -1.05
CPS1-202ENST00000417946 KIF13BQ9NQT8 1826 aa8.5□□□□□ -1.05
CPS1-202ENST00000417946 LTBP1Q14766 1721 aa8.49□□□□□ -1.05
CPS1-202ENST00000417946 DLEC1Q9Y238 1755 aa8.49□□□□□ -1.05
CPS1-202ENST00000417946 PDE8AO60658 829 aa8.49□□□□□ -1.05
CPS1-202ENST00000417946 SURF6O75683 361 aaKnown RBP8.49□□□□□ -1.05
CPS1-202ENST00000417946 PPP1R15BQ5SWA1 713 aa8.49□□□□□ -1.05
CPS1-202ENST00000417946 PRR5LQ6MZQ0 368 aa8.49□□□□□ -1.05
CPS1-202ENST00000417946 C16orf71Q8IYS4 520 aaPredicted RBP8.49□□□□□ -1.05
CPS1-202ENST00000417946 ZNF594Q96JF6 807 aaPredicted RBP8.49□□□□□ -1.05
CPS1-202ENST00000417946 LNPKQ9C0E8 428 aa8.49□□□□□ -1.05
CPS1-202ENST00000417946 STK32BQ9NY57 414 aa8.49□□□□□ -1.05
CPS1-202ENST00000417946 HDAC5Q9UQL6 1122 aa8.49□□□□□ -1.05
CPS1-202ENST00000417946 ZNF609O15014 1411 aa8.48□□□□□ -1.05
CPS1-202ENST00000417946 SF3B3Q15393 1217 aaKnown RBP8.48□□□□□ -1.05
CPS1-202ENST00000417946 ANKRD45Q5TZF3 282 aa8.48□□□□□ -1.05
CPS1-202ENST00000417946 POTEEQ6S8J3 1075 aa8.48□□□□□ -1.05
CPS1-202ENST00000417946 SLC51AQ86UW1 340 aa8.48□□□□□ -1.05
CPS1-202ENST00000417946 CCDC24Q8N4L8 307 aa8.48□□□□□ -1.05
CPS1-202ENST00000417946 FLAD1Q8NFF5 587 aa8.48□□□□□ -1.05
CPS1-202ENST00000417946 RHPN1Q8TCX5 695 aa8.48□□□□□ -1.05
CPS1-202ENST00000417946 CCDC85AQ96PX6 553 aaPredicted RBP8.48□□□□□ -1.05
CPS1-202ENST00000417946 SETDB2Q96T68 719 aa8.48□□□□□ -1.05
CPS1-202ENST00000417946 PUS3Q9BZE2 481 aaKnown RBP8.48□□□□□ -1.05
CPS1-202ENST00000417946 APBB1O00213 710 aa8.47□□□□□ -1.05
CPS1-202ENST00000417946 SOCS7O14512 581 aa8.47□□□□□ -1.05
CPS1-202ENST00000417946 RGS3P49796 1198 aa8.47□□□□□ -1.05
CPS1-202ENST00000417946 LRRC24Q50LG9 513 aa8.47□□□□□ -1.05
CPS1-202ENST00000417946 MSL1Q68DK7 614 aa8.47□□□□□ -1.05
CPS1-202ENST00000417946 NBPF5PQ86XG9 351 aaPredicted RBP8.47□□□□□ -1.05
CPS1-202ENST00000417946 PLEKHM2Q8IWE5 1019 aa8.47□□□□□ -1.05
CPS1-202ENST00000417946 VGLL2Q8N8G2 317 aa8.47□□□□□ -1.05
CPS1-202ENST00000417946 OXER1Q8TDS5 423 aa8.47□□□□□ -1.05
CPS1-202ENST00000417946 CRISPLD2Q9H0B8 497 aa8.47□□□□□ -1.05
CPS1-202ENST00000417946 SIL1Q9H173 461 aa8.47□□□□□ -1.05
CPS1-202ENST00000417946 IL1RAPL2Q9NP60 686 aa8.47□□□□□ -1.05
CPS1-202ENST00000417946 SEC31BQ9NQW1 1179 aa8.47□□□□□ -1.05
CPS1-202ENST00000417946 KLRG2A4D1S0 409 aaPredicted RBP8.46□□□□□ -1.06
CPS1-202ENST00000417946 EYA2O00167 538 aa8.46□□□□□ -1.06
CPS1-202ENST00000417946 RAB11FIP3O75154 756 aa8.46□□□□□ -1.06
CPS1-202ENST00000417946 CIAO1O76071 339 aa8.46□□□□□ -1.06
CPS1-202ENST00000417946 SERPINB2P05120 415 aa8.46□□□□□ -1.06
CPS1-202ENST00000417946 MMP10P09238 476 aa8.46□□□□□ -1.06
CPS1-202ENST00000417946 ITGA6P23229 1130 aa8.46□□□□□ -1.06
CPS1-202ENST00000417946 CRY2Q49AN0 593 aa8.46□□□□□ -1.06
CPS1-202ENST00000417946 HOMEZQ8IX15 550 aa8.46□□□□□ -1.06
CPS1-202ENST00000417946 ZNF454Q8N9F8 522 aa8.46□□□□□ -1.06
CPS1-202ENST00000417946 CNBD1Q8NA66 436 aa8.46□□□□□ -1.06
CPS1-202ENST00000417946 KCNK17Q96T54 332 aa8.46□□□□□ -1.06
CPS1-202ENST00000417946 LRRCC1Q9C099 1032 aa8.46□□□□□ -1.06
CPS1-202ENST00000417946 NYXQ9GZU5 481 aa8.46□□□□□ -1.06
CPS1-202ENST00000417946 TLR7Q9NYK1 1049 aaKnown RBP8.46□□□□□ -1.06
CPS1-202ENST00000417946 AKAP11Q9UKA4 1901 aa8.46□□□□□ -1.06
CPS1-202ENST00000417946 C10orf71Q711Q0 1435 aa8.46□□□□□ -1.06
CPS1-202ENST00000417946 CACNA1SQ13698 1873 aa8.45□□□□□ -1.06
CPS1-202ENST00000417946 GSPT1P15170 499 aaKnown RBP8.45□□□□□ -1.06
CPS1-202ENST00000417946 PSEN2P49810 448 aa8.45□□□□□ -1.06
CPS1-202ENST00000417946 TFCP2Q12800 502 aa8.45□□□□□ -1.06
CPS1-202ENST00000417946 TPTE2Q6XPS3 522 aa8.45□□□□□ -1.06
CPS1-202ENST00000417946 NLGN1Q8N2Q7 840 aa8.45□□□□□ -1.06
CPS1-202ENST00000417946 EAF2Q96CJ1 260 aaPredicted RBP8.45□□□□□ -1.06
CPS1-202ENST00000417946 KIF1BPQ96EK5 621 aa8.45□□□□□ -1.06
CPS1-202ENST00000417946 DDX27Q96GQ7 796 aaKnown RBP8.45□□□□□ -1.06
CPS1-202ENST00000417946 OSBPL3Q9H4L5 887 aa8.45□□□□□ -1.06
CPS1-202ENST00000417946 STAP2Q9UGK3 403 aa8.45□□□□□ -1.06
CPS1-202ENST00000417946 CHMP3Q9Y3E7 222 aa8.45□□□□□ -1.06
CPS1-202ENST00000417946 RIPOR2Q9Y4F9 1068 aa8.45□□□□□ -1.06
CPS1-202ENST00000417946 BRCA1P38398 1863 aaKnown RBP8.45□□□□□ -1.06
CPS1-202ENST00000417946 AK9Q5TCS8 1911 aa8.44□□□□□ -1.06
CPS1-202ENST00000417946 DUOX1Q9NRD9 1551 aa8.44□□□□□ -1.06
CPS1-202ENST00000417946 ANKRD18BA2A2Z9 1011 aa8.44□□□□□ -1.06
CPS1-202ENST00000417946 PTPREP23469 700 aa8.44□□□□□ -1.06
CPS1-202ENST00000417946 IFIT5Q13325 482 aaKnown RBP8.44□□□□□ -1.06
CPS1-202ENST00000417946 HSP90AB4PQ58FF6 505 aa8.44□□□□□ -1.06
CPS1-202ENST00000417946 TSHZ3Q63HK5 1081 aa8.44□□□□□ -1.06
CPS1-202ENST00000417946 ERC1Q8IUD2 1116 aa8.44□□□□□ -1.06
CPS1-202ENST00000417946 PI4K2BQ8TCG2 481 aa8.44□□□□□ -1.06
CPS1-202ENST00000417946 CELF1Q92879 486 aaKnown RBP8.44□□□□□ -1.06
CPS1-202ENST00000417946 DBNLQ9UJU6 430 aaKnown RBP8.44□□□□□ -1.06
CPS1-202ENST00000417946 MX1P20591 662 aa8.43□□□□□ -1.06
CPS1-202ENST00000417946 HOXA10P31260 410 aaPredicted RBP8.43□□□□□ -1.06
CPS1-202ENST00000417946 IL15P40933 162 aaPredicted RBP8.43□□□□□ -1.06
CPS1-202ENST00000417946 PDE1AP54750 535 aa8.43□□□□□ -1.06
CPS1-202ENST00000417946 MAP3K9P80192 1104 aa8.43□□□□□ -1.06
CPS1-202ENST00000417946 G3BP1Q13283 466 aaKnown RBP eCLIP8.43□□□□□ -1.06
CPS1-202ENST00000417946 CCDC57Q2TAC2 916 aa8.43□□□□□ -1.06
CPS1-202ENST00000417946 C8orf34Q49A92 452 aa8.43□□□□□ -1.06
CPS1-202ENST00000417946 CCDC152Q4G0S7 254 aa8.43□□□□□ -1.06
CPS1-202ENST00000417946 TNNI3KQ59H18 835 aa8.43□□□□□ -1.06
CPS1-202ENST00000417946 TTC22Q5TAA0 569 aa8.43□□□□□ -1.06
CPS1-202ENST00000417946 SLC16A10Q8TF71 515 aa8.43□□□□□ -1.06
CPS1-202ENST00000417946 LARP6Q9BRS8 491 aaKnown RBP8.43□□□□□ -1.06
CPS1-202ENST00000417946 GPR108Q9NPR9 543 aa8.43□□□□□ -1.06
CPS1-202ENST00000417946 PLA2G2EQ9NZK7 142 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms