RNA–Protein interactions for RNA: ENST00000416774.1

LINC01342-201, Transcript of long intergenic non-protein coding RNA 1342, humanhuman

TSL 1 (best) BASIC

Gene LINC01342, Length 1,620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01342-201ENST00000416774 SPON1Q9HCB6 807 aa28.29■■■□□ 2.12
LINC01342-201ENST00000416774 ZSWIM6Q9HCJ5 1215 aa28.29■■■□□ 2.12
LINC01342-201ENST00000416774 ZFYP08048 801 aaPredicted RBP28.28■■■□□ 2.12
LINC01342-201ENST00000416774 MCM4P33991 863 aa28.28■■■□□ 2.12
LINC01342-201ENST00000416774 COL24A1Q17RW2 1714 aa28.28■■■□□ 2.12
LINC01342-201ENST00000416774 SLC10A5Q5PT55 438 aa28.28■■■□□ 2.12
LINC01342-201ENST00000416774 ZNF589Q86UQ0 364 aaPredicted RBP28.28■■■□□ 2.12
LINC01342-201ENST00000416774 NDUFB9Q9Y6M9 179 aa28.28■■■□□ 2.12
LINC01342-201ENST00000416774 SLC27A2O14975 620 aa28.27■■■□□ 2.12
LINC01342-201ENST00000416774 RNF113AO15541 343 aaKnown RBP28.27■■■□□ 2.12
LINC01342-201ENST00000416774 SF3B3Q15393 1217 aaKnown RBP28.27■■■□□ 2.12
LINC01342-201ENST00000416774 PUM3Q15397 648 aaKnown RBP28.27■■■□□ 2.12
LINC01342-201ENST00000416774 LPIN2Q92539 896 aa28.27■■■□□ 2.12
LINC01342-201ENST00000416774 NYXQ9GZU5 481 aa28.27■■■□□ 2.12
LINC01342-201ENST00000416774 FOXD4L1Q9NU39 408 aa28.27■■■□□ 2.12
LINC01342-201ENST00000416774 U3KPZ7 1027 aaPredicted RBP28.27■■■□□ 2.12
LINC01342-201ENST00000416774 FGFR2P21802 821 aa28.26■■■□□ 2.11
LINC01342-201ENST00000416774 RFC4P35249 363 aa28.26■■■□□ 2.11
LINC01342-201ENST00000416774 VPS53Q5VIR6 699 aa28.26■■■□□ 2.11
LINC01342-201ENST00000416774 CLEC17AQ6ZS10 378 aa28.26■■■□□ 2.11
LINC01342-201ENST00000416774 MPHOSPH8Q99549 860 aa28.26■■■□□ 2.11
LINC01342-201ENST00000416774 FAM177BA6PVY3 158 aa28.25■■■□□ 2.11
LINC01342-201ENST00000416774 UQCRFS1P1P0C7P4 283 aa28.25■■■□□ 2.11
LINC01342-201ENST00000416774 IGHMBP2P38935 993 aaKnown RBP28.25■■■□□ 2.11
LINC01342-201ENST00000416774 TNPO1Q92973 898 aaKnown RBP28.25■■■□□ 2.11
LINC01342-201ENST00000416774 GBP4Q96PP9 640 aa28.25■■■□□ 2.11
LINC01342-201ENST00000416774 BCL2L12Q9HB09 334 aa28.25■■■□□ 2.11
LINC01342-201ENST00000416774 CYP46A1Q9Y6A2 500 aa28.25■■■□□ 2.11
LINC01342-201ENST00000416774 RPAP1Q9BWH6 1393 aaPredicted RBP28.25■■■□□ 2.11
LINC01342-201ENST00000416774 AKAP11Q9UKA4 1901 aa28.25■■■□□ 2.11
LINC01342-201ENST00000416774 KRT32Q14532 448 aa28.25■■■□□ 2.11
LINC01342-201ENST00000416774 MYH7P12883 1935 aa28.24■■■□□ 2.11
LINC01342-201ENST00000416774 ZPR1O75312 459 aa28.24■■■□□ 2.11
LINC01342-201ENST00000416774 CASTP20810 708 aaKnown RBP28.24■■■□□ 2.11
LINC01342-201ENST00000416774 MSL1Q68DK7 614 aa28.24■■■□□ 2.11
LINC01342-201ENST00000416774 JAKMIP1Q96N16 626 aaKnown RBP28.24■■■□□ 2.11
LINC01342-201ENST00000416774 CDC5LQ99459 802 aaKnown RBP28.24■■■□□ 2.11
LINC01342-201ENST00000416774 ALDH8A1Q9H2A2 487 aaPredicted RBP28.24■■■□□ 2.11
LINC01342-201ENST00000416774 DDX11L8A8MPP1 907 aa28.23■■■□□ 2.11
LINC01342-201ENST00000416774 PTMSP20962 102 aa28.23■■■□□ 2.11
LINC01342-201ENST00000416774 RUFY3Q7L099 469 aa28.23■■■□□ 2.11
LINC01342-201ENST00000416774 DSCC1Q9BVC3 393 aa28.23■■■□□ 2.11
LINC01342-201ENST00000416774 SLC5A1P13866 664 aa28.22■■■□□ 2.11
LINC01342-201ENST00000416774 ARID4AP29374 1257 aaPredicted RBP28.22■■■□□ 2.11
LINC01342-201ENST00000416774 TTF1Q15361 905 aaPredicted RBP28.22■■■□□ 2.11
LINC01342-201ENST00000416774 LIMCH1Q9UPQ0 1083 aa28.22■■■□□ 2.11
LINC01342-201ENST00000416774 CYP2E1P05181 493 aaPredicted RBP28.21■■■□□ 2.11
LINC01342-201ENST00000416774 FKBP4Q02790 459 aaKnown RBP eCLIP28.21■■■□□ 2.11
LINC01342-201ENST00000416774 PTGER2P43116 358 aa28.21■■■□□ 2.11
LINC01342-201ENST00000416774 ERFEQ4G0M1 354 aa28.21■■■□□ 2.11
LINC01342-201ENST00000416774 TBC1D9BQ66K14 1250 aa28.21■■■□□ 2.11
LINC01342-201ENST00000416774 ZSCAN31Q96LW9 406 aaPredicted RBP28.21■■■□□ 2.11
LINC01342-201ENST00000416774 SETDB2Q96T68 719 aa28.21■■■□□ 2.11
LINC01342-201ENST00000416774 SEC31BQ9NQW1 1179 aa28.21■■■□□ 2.11
LINC01342-201ENST00000416774 PDRG1Q9NUG6 133 aa28.21■■■□□ 2.11
LINC01342-201ENST00000416774 SRP68Q9UHB9 627 aaKnown RBP28.21■■■□□ 2.11
LINC01342-201ENST00000416774 AK2P54819 239 aa28.2■■■□□ 2.1
LINC01342-201ENST00000416774 ZSCAN25Q6NSZ9 544 aa28.2■■■□□ 2.1
LINC01342-201ENST00000416774 ADCK5Q3MIX3 580 aa28.19■■■□□ 2.1
LINC01342-201ENST00000416774 ZGPATQ8N5A5 531 aaKnown RBP28.19■■■□□ 2.1
LINC01342-201ENST00000416774 SEC62Q99442 399 aaKnown RBP28.19■■■□□ 2.1
LINC01342-201ENST00000416774 C4AP0C0L4 1744 aa28.18■■■□□ 2.1
LINC01342-201ENST00000416774 ZAP70P43403 619 aa28.18■■■□□ 2.1
LINC01342-201ENST00000416774 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.18■■■□□ 2.1
LINC01342-201ENST00000416774 MCAMP43121 646 aa28.18■■■□□ 2.1
LINC01342-201ENST00000416774 SCARF1Q14162 830 aa28.18■■■□□ 2.1
LINC01342-201ENST00000416774 CCDC102BQ68D86 513 aa28.18■■■□□ 2.1
LINC01342-201ENST00000416774 SGIP1Q9BQI5 828 aa28.18■■■□□ 2.1
LINC01342-201ENST00000416774 SH2B1Q9NRF2 756 aaPredicted RBP28.18■■■□□ 2.1
LINC01342-201ENST00000416774 GYS1P13807 737 aa28.17■■■□□ 2.1
LINC01342-201ENST00000416774 ANKRD1Q15327 319 aa28.17■■■□□ 2.1
LINC01342-201ENST00000416774 POLD1P28340 1107 aa28.16■■■□□ 2.1
LINC01342-201ENST00000416774 BLOC1S2Q6QNY1 142 aa28.16■■■□□ 2.1
LINC01342-201ENST00000416774 CCDC129Q6ZRS4 1044 aa28.16■■■□□ 2.1
LINC01342-201ENST00000416774 MAST3O60307 1309 aa28.15■■■□□ 2.1
LINC01342-201ENST00000416774 GTF2E1P29083 439 aaPredicted RBP28.15■■■□□ 2.1
LINC01342-201ENST00000416774 TPTE2Q6XPS3 522 aa28.15■■■□□ 2.1
LINC01342-201ENST00000416774 ANKRD18AQ8IVF6 992 aa28.15■■■□□ 2.1
LINC01342-201ENST00000416774 APPBP2Q92624 585 aa28.15■■■□□ 2.1
LINC01342-201ENST00000416774 A0A1B0GUL6 1792 aa28.15■■■□□ 2.1
LINC01342-201ENST00000416774 SRCAPQ6ZRS2 3230 aa28.14■■■□□ 2.09
LINC01342-201ENST00000416774 RPS6KB1P23443 525 aa28.14■■■□□ 2.09
LINC01342-201ENST00000416774 NLGN1Q8N2Q7 840 aa28.14■■■□□ 2.09
LINC01342-201ENST00000416774 BSDC1Q9NW68 430 aaPredicted RBP28.14■■■□□ 2.09
LINC01342-201ENST00000416774 PPP1R1BQ9UD71 204 aaPredicted RBP28.14■■■□□ 2.09
LINC01342-201ENST00000416774 CHGBP05060 677 aa28.13■■■□□ 2.09
LINC01342-201ENST00000416774 NBPF5PQ86XG9 351 aaPredicted RBP28.13■■■□□ 2.09
LINC01342-201ENST00000416774 NLRP3Q96P20 1036 aa28.13■■■□□ 2.09
LINC01342-201ENST00000416774 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.13■■■□□ 2.09
LINC01342-201ENST00000416774 HSPD1P10809 573 aaKnown RBP28.12■■■□□ 2.09
LINC01342-201ENST00000416774 PHKA1P46020 1223 aa28.12■■■□□ 2.09
LINC01342-201ENST00000416774 CHRNDQ07001 517 aa28.12■■■□□ 2.09
LINC01342-201ENST00000416774 BICDL1Q6ZP65 573 aa28.12■■■□□ 2.09
LINC01342-201ENST00000416774 HELBQ8NG08 1087 aaPredicted RBP28.12■■■□□ 2.09
LINC01342-201ENST00000416774 HMGB1P09429 215 aaKnown RBP28.11■■■□□ 2.09
LINC01342-201ENST00000416774 UBE3CQ15386 1083 aa28.11■■■□□ 2.09
LINC01342-201ENST00000416774 NOL8Q76FK4 1167 aaKnown RBP28.11■■■□□ 2.09
LINC01342-201ENST00000416774 OSBP2Q969R2 916 aa28.11■■■□□ 2.09
LINC01342-201ENST00000416774 GOLGA6L22H0YM25 854 aa28.1■■■□□ 2.09
LINC01342-201ENST00000416774 GSE1Q14687 1217 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms