RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 ZGPATQ8N5A5 531 aaKnown RBP12.81□□□□□ -0.36
SMPD4P1-201ENST00000416717 TMX3Q96JJ7 454 aa12.81□□□□□ -0.36
SMPD4P1-201ENST00000416717 ARAP2Q8WZ64 1704 aa12.81□□□□□ -0.36
SMPD4P1-201ENST00000416717 ZKSCAN1P17029 563 aaPredicted RBP12.81□□□□□ -0.36
SMPD4P1-201ENST00000416717 COL9A3Q14050 684 aaPredicted RBP12.81□□□□□ -0.36
SMPD4P1-201ENST00000416717 SLC10A5Q5PT55 438 aa12.81□□□□□ -0.36
SMPD4P1-201ENST00000416717 ZMYM1Q5SVZ6 1142 aa12.81□□□□□ -0.36
SMPD4P1-201ENST00000416717 VPS53Q5VIR6 699 aa12.81□□□□□ -0.36
SMPD4P1-201ENST00000416717 IQSEC3Q9UPP2 1182 aaPredicted RBP12.81□□□□□ -0.36
SMPD4P1-201ENST00000416717 RFX7Q2KHR2 1363 aa12.8□□□□□ -0.36
SMPD4P1-201ENST00000416717 TNRC6CQ9HCJ0 1690 aaKnown RBP12.8□□□□□ -0.36
SMPD4P1-201ENST00000416717 A0A1B0GUL6 1792 aa12.8□□□□□ -0.36
SMPD4P1-201ENST00000416717 M0R2C6 588 aa12.8□□□□□ -0.36
SMPD4P1-201ENST00000416717 CYP2E1P05181 493 aaPredicted RBP12.8□□□□□ -0.36
SMPD4P1-201ENST00000416717 DDIT3P35638 169 aa12.8□□□□□ -0.36
SMPD4P1-201ENST00000416717 BCAMP50895 628 aa12.8□□□□□ -0.36
SMPD4P1-201ENST00000416717 MAST3O60307 1309 aa12.8□□□□□ -0.36
SMPD4P1-201ENST00000416717 RGL2O15211 777 aa12.79□□□□□ -0.36
SMPD4P1-201ENST00000416717 IDH1O75874 414 aaKnown RBP12.79□□□□□ -0.36
SMPD4P1-201ENST00000416717 GYS1P13807 737 aa12.79□□□□□ -0.36
SMPD4P1-201ENST00000416717 OSBP2Q969R2 916 aa12.79□□□□□ -0.36
SMPD4P1-201ENST00000416717 PIH1D3Q9NQM4 214 aaKnown RBP12.79□□□□□ -0.36
SMPD4P1-201ENST00000416717 CARMIL3Q8ND23 1372 aa12.79□□□□□ -0.36
SMPD4P1-201ENST00000416717 SSFA2P28290 1259 aa12.79□□□□□ -0.36
SMPD4P1-201ENST00000416717 AK2P54819 239 aa12.79□□□□□ -0.36
SMPD4P1-201ENST00000416717 CNBD1Q8NA66 436 aa12.79□□□□□ -0.36
SMPD4P1-201ENST00000416717 IL17RAQ96F46 866 aa12.79□□□□□ -0.36
SMPD4P1-201ENST00000416717 TCEANC2Q96MN5 208 aa12.79□□□□□ -0.36
SMPD4P1-201ENST00000416717 HELLSQ9NRZ9 838 aa12.79□□□□□ -0.36
SMPD4P1-201ENST00000416717 HMG20BQ9P0W2 317 aa12.79□□□□□ -0.36
SMPD4P1-201ENST00000416717 ADRA2BP18089 450 aa12.78□□□□□ -0.36
SMPD4P1-201ENST00000416717 ARID4AP29374 1257 aaPredicted RBP12.78□□□□□ -0.36
SMPD4P1-201ENST00000416717 RPS8P62241 208 aaKnown RBP12.78□□□□□ -0.36
SMPD4P1-201ENST00000416717 RASGRF1Q13972 1273 aa12.78□□□□□ -0.36
SMPD4P1-201ENST00000416717 RNF20Q5VTR2 975 aa12.78□□□□□ -0.36
SMPD4P1-201ENST00000416717 SLC51AQ86UW1 340 aa12.78□□□□□ -0.36
SMPD4P1-201ENST00000416717 BSDC1Q9NW68 430 aaPredicted RBP12.78□□□□□ -0.36
SMPD4P1-201ENST00000416717 TFCP2L1Q9NZI6 479 aa12.78□□□□□ -0.36
SMPD4P1-201ENST00000416717 MINPP1Q9UNW1 487 aa12.78□□□□□ -0.36
SMPD4P1-201ENST00000416717 UQCRFS1P1P0C7P4 283 aa12.78□□□□□ -0.36
SMPD4P1-201ENST00000416717 DEKP35659 375 aaKnown RBP12.78□□□□□ -0.36
SMPD4P1-201ENST00000416717 GYG1P46976 350 aa12.78□□□□□ -0.36
SMPD4P1-201ENST00000416717 SPATA5Q8NB90 893 aa12.78□□□□□ -0.36
SMPD4P1-201ENST00000416717 TTC14Q96N46 770 aa12.78□□□□□ -0.36
SMPD4P1-201ENST00000416717 A0A0G2JLW4 131 aa12.77□□□□□ -0.36
SMPD4P1-201ENST00000416717 DTNBO60941 627 aa12.77□□□□□ -0.36
SMPD4P1-201ENST00000416717 MCM2P49736 904 aa12.77□□□□□ -0.36
SMPD4P1-201ENST00000416717 ZNF827Q17R98 1081 aa12.77□□□□□ -0.36
SMPD4P1-201ENST00000416717 SLC9C2Q5TAH2 1124 aa12.77□□□□□ -0.36
SMPD4P1-201ENST00000416717 KCNB2Q92953 911 aa12.77□□□□□ -0.36
SMPD4P1-201ENST00000416717 PUS7LQ9H0K6 701 aaKnown RBP12.77□□□□□ -0.36
SMPD4P1-201ENST00000416717 PDRG1Q9NUG6 133 aa12.77□□□□□ -0.36
SMPD4P1-201ENST00000416717 CYP46A1Q9Y6A2 500 aa12.77□□□□□ -0.36
SMPD4P1-201ENST00000416717 HSPD1P10809 573 aaKnown RBP12.77□□□□□ -0.37
SMPD4P1-201ENST00000416717 PRR5LQ6MZQ0 368 aa12.77□□□□□ -0.37
SMPD4P1-201ENST00000416717 POTEAQ6S8J7 498 aa12.77□□□□□ -0.37
SMPD4P1-201ENST00000416717 ZNF512BQ96KM6 892 aaPredicted RBP12.77□□□□□ -0.37
SMPD4P1-201ENST00000416717 RGS17Q9UGC6 210 aaPredicted RBP12.77□□□□□ -0.37
SMPD4P1-201ENST00000416717 LAMA4Q16363 1823 aa12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 SERPINB2P05120 415 aa12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 CYP21A2P08686 494 aa12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 PKP1Q13835 747 aa12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 LRRFIP1Q32MZ4 808 aaKnown RBP12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 RUFY3Q7L099 469 aa12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 ZSWIM6Q9HCJ5 1215 aa12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 WWC3Q9ULE0 1092 aa12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 U3KPZ7 1027 aaPredicted RBP12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 ZFYP08048 801 aaPredicted RBP12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 KLRK1P26718 216 aa12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 TM4SF1P30408 202 aa12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 TTF1Q15361 905 aaPredicted RBP12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 APPBP2Q92624 585 aa12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 TNPO1Q92973 898 aaKnown RBP12.76□□□□□ -0.37
SMPD4P1-201ENST00000416717 ADD2P35612 726 aa12.75□□□□□ -0.37
SMPD4P1-201ENST00000416717 TTLL5Q6EMB2 1281 aa12.75□□□□□ -0.37
SMPD4P1-201ENST00000416717 BLOC1S2Q6QNY1 142 aa12.75□□□□□ -0.37
SMPD4P1-201ENST00000416717 TM6SF1Q9BZW5 370 aa12.75□□□□□ -0.37
SMPD4P1-201ENST00000416717 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
SMPD4P1-201ENST00000416717 LARGE1O95461 756 aa12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 PSMA5P28066 241 aa12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 DDR1Q08345 913 aa12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 FOXD4L5Q5VV16 416 aaPredicted RBP12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 VPS37DQ86XT2 251 aa12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 FOXD4L4Q8WXT5 416 aaPredicted RBP12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 ZNF532Q9HCE3 1301 aa12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 RPAP1Q9BWH6 1393 aaPredicted RBP12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 MYH13Q9UKX3 1938 aa12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 PLSCR1O15162 318 aa12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 GPAA1O43292 621 aa12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 PDE6AP16499 860 aa12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 RAB3GAP1Q15042 981 aa12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 DSCC1Q9BVC3 393 aa12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 ANO8Q9HCE9 1232 aaPredicted RBP12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 LIMCH1Q9UPQ0 1083 aa12.74□□□□□ -0.37
SMPD4P1-201ENST00000416717 HAND2P61296 217 aa12.73□□□□□ -0.37
SMPD4P1-201ENST00000416717 ST5P78524 1137 aa12.73□□□□□ -0.37
SMPD4P1-201ENST00000416717 CUL4AQ13619 759 aa12.73□□□□□ -0.37
SMPD4P1-201ENST00000416717 UBE4AQ14139 1066 aa12.73□□□□□ -0.37
SMPD4P1-201ENST00000416717 ZSCAN25Q6NSZ9 544 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms