RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 EHD4Q9H223 541 aa10.35□□□□□ -0.75
LINC00343-202ENST00000415294 ZFYVE1Q9HBF4 777 aa10.35□□□□□ -0.75
LINC00343-202ENST00000415294 DNMBPQ6XZF7 1577 aa10.35□□□□□ -0.75
LINC00343-202ENST00000415294 USP31Q70CQ4 1352 aa10.35□□□□□ -0.75
LINC00343-202ENST00000415294 DIP2BQ9P265 1576 aa10.34□□□□□ -0.75
LINC00343-202ENST00000415294 A0A1W2PP55 124 aa10.34□□□□□ -0.75
LINC00343-202ENST00000415294 PPFIA3O75145 1194 aa10.34□□□□□ -0.75
LINC00343-202ENST00000415294 CYP2E1P05181 493 aaPredicted RBP10.34□□□□□ -0.75
LINC00343-202ENST00000415294 USP17L7P0C7H9 530 aa10.34□□□□□ -0.75
LINC00343-202ENST00000415294 TAF1CQ15572 869 aaPredicted RBP10.34□□□□□ -0.75
LINC00343-202ENST00000415294 NXPE4Q6UWF7 544 aa10.34□□□□□ -0.75
LINC00343-202ENST00000415294 NT5DC4Q86YG4 428 aa10.34□□□□□ -0.75
LINC00343-202ENST00000415294 ANKRD24Q8TF21 1146 aa10.34□□□□□ -0.75
LINC00343-202ENST00000415294 BHMTQ93088 406 aa10.34□□□□□ -0.75
LINC00343-202ENST00000415294 SLC30A3Q99726 388 aa10.34□□□□□ -0.75
LINC00343-202ENST00000415294 AVENQ9NQS1 362 aaPredicted RBP10.34□□□□□ -0.75
LINC00343-202ENST00000415294 KANSL3Q9P2N6 904 aa10.34□□□□□ -0.75
LINC00343-202ENST00000415294 PPM1HQ9ULR3 514 aa10.34□□□□□ -0.75
LINC00343-202ENST00000415294 MAGI1Q96QZ7 1491 aaPredicted RBP10.34□□□□□ -0.75
LINC00343-202ENST00000415294 TSPOAP1O95153 1857 aa10.34□□□□□ -0.75
LINC00343-202ENST00000415294 PEAR1Q5VY43 1037 aaPredicted RBP10.33□□□□□ -0.76
LINC00343-202ENST00000415294 SV2AQ7L0J3 742 aa10.33□□□□□ -0.76
LINC00343-202ENST00000415294 NCAPG2Q86XI2 1143 aa10.33□□□□□ -0.76
LINC00343-202ENST00000415294 SPACA7Q96KW9 195 aa10.33□□□□□ -0.76
LINC00343-202ENST00000415294 TGIF2Q9GZN2 237 aa10.33□□□□□ -0.76
LINC00343-202ENST00000415294 HCN2Q9UL51 889 aa10.33□□□□□ -0.76
LINC00343-202ENST00000415294 PRR12Q9ULL5 1215 aa10.33□□□□□ -0.76
LINC00343-202ENST00000415294 POLA1P09884 1462 aaPredicted RBP10.33□□□□□ -0.76
LINC00343-202ENST00000415294 FAM181BA6NEQ2 426 aa10.33□□□□□ -0.76
LINC00343-202ENST00000415294 GPLD1P80108 840 aa10.33□□□□□ -0.76
LINC00343-202ENST00000415294 PTPN12Q05209 780 aaKnown RBP10.33□□□□□ -0.76
LINC00343-202ENST00000415294 TRPM4Q8TD43 1214 aa10.33□□□□□ -0.76
LINC00343-202ENST00000415294 ZNF468Q5VIY5 522 aaPredicted RBP10.32□□□□□ -0.76
LINC00343-202ENST00000415294 HS2ST1Q7LGA3 356 aa10.32□□□□□ -0.76
LINC00343-202ENST00000415294 ZSCAN1Q8NBB4 408 aa10.32□□□□□ -0.76
LINC00343-202ENST00000415294 RAD54L2Q9Y4B4 1467 aa10.31□□□□□ -0.76
LINC00343-202ENST00000415294 SIN3BO75182 1162 aa10.31□□□□□ -0.76
LINC00343-202ENST00000415294 CEP120Q8N960 986 aa10.31□□□□□ -0.76
LINC00343-202ENST00000415294 NOC4LQ9BVI4 516 aaKnown RBP10.31□□□□□ -0.76
LINC00343-202ENST00000415294 LIN7BQ9HAP6 207 aa10.31□□□□□ -0.76
LINC00343-202ENST00000415294 CDC14CA4D256 554 aa10.3□□□□□ -0.76
LINC00343-202ENST00000415294 RAD51AP2Q09MP3 1159 aa10.3□□□□□ -0.76
LINC00343-202ENST00000415294 GRIN2CQ14957 1233 aa10.3□□□□□ -0.76
LINC00343-202ENST00000415294 CCNJLQ8IV13 435 aa10.3□□□□□ -0.76
LINC00343-202ENST00000415294 GLIS3Q8NEA6 775 aa10.3□□□□□ -0.76
LINC00343-202ENST00000415294 RBSNQ9H1K0 784 aa10.3□□□□□ -0.76
LINC00343-202ENST00000415294 CCSER2Q9H7U1 834 aa10.3□□□□□ -0.76
LINC00343-202ENST00000415294 LATS2Q9NRM7 1088 aa10.3□□□□□ -0.76
LINC00343-202ENST00000415294 VSIG8P0DPA2 414 aa10.29□□□□□ -0.76
LINC00343-202ENST00000415294 VWA5B2Q8N398 1253 aa10.29□□□□□ -0.76
LINC00343-202ENST00000415294 C3orf58Q8NDZ4 430 aa10.29□□□□□ -0.76
LINC00343-202ENST00000415294 OSMRQ99650 979 aa10.29□□□□□ -0.76
LINC00343-202ENST00000415294 NSFL1CQ9UNZ2 370 aaKnown RBP10.29□□□□□ -0.76
LINC00343-202ENST00000415294 CEP170Q5SW79 1584 aa10.28□□□□□ -0.76
LINC00343-202ENST00000415294 SPATA31D1Q6ZQQ2 1576 aa10.28□□□□□ -0.76
LINC00343-202ENST00000415294 TMEM238LA0A1B0GVL6 79 aa10.28□□□□□ -0.76
LINC00343-202ENST00000415294 BMP4P12644 408 aa10.28□□□□□ -0.76
LINC00343-202ENST00000415294 CTBSQ01459 385 aa10.28□□□□□ -0.76
LINC00343-202ENST00000415294 SF3A1Q15459 793 aaKnown RBP10.28□□□□□ -0.76
LINC00343-202ENST00000415294 NAALADL2Q58DX5 795 aa10.28□□□□□ -0.76
LINC00343-202ENST00000415294 C9orf131Q5VYM1 1079 aa10.28□□□□□ -0.76
LINC00343-202ENST00000415294 TCF12Q99081 682 aa10.28□□□□□ -0.76
LINC00343-202ENST00000415294 ZKSCAN3Q9BRR0 538 aa10.28□□□□□ -0.76
LINC00343-202ENST00000415294 BHLHE41Q9C0J9 482 aaPredicted RBP10.28□□□□□ -0.76
LINC00343-202ENST00000415294 ABCB6Q9NP58 842 aa10.28□□□□□ -0.76
LINC00343-202ENST00000415294 DZANK1Q9NVP4 752 aa10.28□□□□□ -0.76
LINC00343-202ENST00000415294 LOC102724428A0A0B4J2F2 783 aa10.27□□□□□ -0.77
LINC00343-202ENST00000415294 SIK1P57059 783 aa10.27□□□□□ -0.77
LINC00343-202ENST00000415294 COL13A1Q5TAT6 717 aaPredicted RBP10.27□□□□□ -0.77
LINC00343-202ENST00000415294 MEI1Q5TIA1 1274 aa10.27□□□□□ -0.77
LINC00343-202ENST00000415294 RAB44Q7Z6P3 723 aaPredicted RBP10.27□□□□□ -0.77
LINC00343-202ENST00000415294 SYT9Q86SS6 491 aa10.27□□□□□ -0.77
LINC00343-202ENST00000415294 ZNF654Q8IZM8 581 aa10.27□□□□□ -0.77
LINC00343-202ENST00000415294 TMEM102Q8N9M5 508 aaPredicted RBP10.27□□□□□ -0.77
LINC00343-202ENST00000415294 SREK1Q8WXA9 508 aaKnown RBP10.27□□□□□ -0.77
LINC00343-202ENST00000415294 OXCT2Q9BYC2 517 aaPredicted RBP10.27□□□□□ -0.77
LINC00343-202ENST00000415294 MAPKBP1O60336 1514 aa10.27□□□□□ -0.77
LINC00343-202ENST00000415294 ARAFP10398 606 aa10.26□□□□□ -0.77
LINC00343-202ENST00000415294 RLBP1P12271 317 aa10.26□□□□□ -0.77
LINC00343-202ENST00000415294 PWP1Q13610 501 aa10.26□□□□□ -0.77
LINC00343-202ENST00000415294 GNL2Q13823 731 aaKnown RBP10.26□□□□□ -0.77
LINC00343-202ENST00000415294 TNFRSF25Q93038 417 aa10.26□□□□□ -0.77
LINC00343-202ENST00000415294 NSUN5Q96P11 429 aaKnown RBP10.26□□□□□ -0.77
LINC00343-202ENST00000415294 GGT7Q9UJ14 662 aa10.26□□□□□ -0.77
LINC00343-202ENST00000415294 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.26□□□□□ -0.77
LINC00343-202ENST00000415294 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.26□□□□□ -0.77
LINC00343-202ENST00000415294 GRIN2BQ13224 1484 aa10.26□□□□□ -0.77
LINC00343-202ENST00000415294 WDR97A6NE52 1622 aa10.25□□□□□ -0.77
LINC00343-202ENST00000415294 GHRHP01286 108 aa10.25□□□□□ -0.77
LINC00343-202ENST00000415294 MX2P20592 715 aa10.25□□□□□ -0.77
LINC00343-202ENST00000415294 ITPKAP23677 461 aa10.25□□□□□ -0.77
LINC00343-202ENST00000415294 MAP2K3P46734 347 aa10.25□□□□□ -0.77
LINC00343-202ENST00000415294 RPS26P11Q5JNZ5 115 aaPredicted RBP10.25□□□□□ -0.77
LINC00343-202ENST00000415294 DTHD1Q6ZMT9 781 aa10.25□□□□□ -0.77
LINC00343-202ENST00000415294 ERMP1Q7Z2K6 904 aa10.25□□□□□ -0.77
LINC00343-202ENST00000415294 SLC43A3Q8NBI5 491 aa10.25□□□□□ -0.77
LINC00343-202ENST00000415294 CNTNAP3BQ96NU0 1288 aa10.25□□□□□ -0.77
LINC00343-202ENST00000415294 CNTNAP3Q9BZ76 1288 aa10.25□□□□□ -0.77
LINC00343-202ENST00000415294 UBE2OQ9C0C9 1292 aaKnown RBP10.25□□□□□ -0.77
LINC00343-202ENST00000415294 CEP44Q9C0F1 390 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms