RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 DZANK1Q9NVP4 752 aa6.85□□□□□ -1.31
HMGB3P23-201ENST00000414981 KANSL3Q9P2N6 904 aa6.85□□□□□ -1.31
HMGB3P23-201ENST00000414981 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P23-201ENST00000414981 DLL1O00548 723 aa6.84□□□□□ -1.31
HMGB3P23-201ENST00000414981 EREGO14944 169 aa6.84□□□□□ -1.31
HMGB3P23-201ENST00000414981 DEAF1O75398 565 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P23-201ENST00000414981 KCNA1Q09470 495 aa6.84□□□□□ -1.31
HMGB3P23-201ENST00000414981 TMEM102Q8N9M5 508 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P23-201ENST00000414981 FAM129BQ96TA1 746 aa6.84□□□□□ -1.31
HMGB3P23-201ENST00000414981 FOXD3Q9UJU5 478 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P23-201ENST00000414981 AMOTL2Q9Y2J4 779 aa6.84□□□□□ -1.31
HMGB3P23-201ENST00000414981 PTPRAP18433 802 aa6.83□□□□□ -1.32
HMGB3P23-201ENST00000414981 SETDB1Q15047 1291 aa6.83□□□□□ -1.32
HMGB3P23-201ENST00000414981 NXPE3Q969Y0 559 aa6.83□□□□□ -1.32
HMGB3P23-201ENST00000414981 RBCK1Q9BYM8 510 aa6.83□□□□□ -1.32
HMGB3P23-201ENST00000414981 FAM177BA6PVY3 158 aa6.82□□□□□ -1.32
HMGB3P23-201ENST00000414981 PATL2C9JE40 543 aaKnown RBP6.82□□□□□ -1.32
HMGB3P23-201ENST00000414981 PDE2AO00408 941 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P23-201ENST00000414981 SHISA2Q6UWI4 295 aa6.82□□□□□ -1.32
HMGB3P23-201ENST00000414981 TMEM130Q8N3G9 435 aa6.82□□□□□ -1.32
HMGB3P23-201ENST00000414981 OSMRQ99650 979 aa6.82□□□□□ -1.32
HMGB3P23-201ENST00000414981 LACRTQ9GZZ8 138 aa6.82□□□□□ -1.32
HMGB3P23-201ENST00000414981 LINC01387J3KSC0 135 aa6.81□□□□□ -1.32
HMGB3P23-201ENST00000414981 IGHA2P01877 340 aa6.81□□□□□ -1.32
HMGB3P23-201ENST00000414981 MBTPS1Q14703 1052 aa6.81□□□□□ -1.32
HMGB3P23-201ENST00000414981 FAM117BQ6P1L5 589 aa6.81□□□□□ -1.32
HMGB3P23-201ENST00000414981 ADAMTSL4Q6UY14 1074 aa6.81□□□□□ -1.32
HMGB3P23-201ENST00000414981 TXNRD3Q86VQ6 643 aa6.81□□□□□ -1.32
HMGB3P23-201ENST00000414981 GALNT12Q8IXK2 581 aa6.81□□□□□ -1.32
HMGB3P23-201ENST00000414981 KLHL23Q8NBE8 558 aa6.81□□□□□ -1.32
HMGB3P23-201ENST00000414981 WNT8BQ93098 351 aa6.81□□□□□ -1.32
HMGB3P23-201ENST00000414981 DMRTB1Q96MA1 342 aa6.81□□□□□ -1.32
HMGB3P23-201ENST00000414981 USP21Q9UK80 565 aa6.81□□□□□ -1.32
HMGB3P23-201ENST00000414981 ACPPP15309 386 aa6.8□□□□□ -1.32
HMGB3P23-201ENST00000414981 CABP4P57796 275 aa6.8□□□□□ -1.32
HMGB3P23-201ENST00000414981 PEAR1Q5VY43 1037 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P23-201ENST00000414981 ZKSCAN3Q9BRR0 538 aa6.8□□□□□ -1.32
HMGB3P23-201ENST00000414981 MRPL18Q9H0U6 180 aaKnown RBP6.8□□□□□ -1.32
HMGB3P23-201ENST00000414981 DNAJC25Q9H1X3 360 aa6.8□□□□□ -1.32
HMGB3P23-201ENST00000414981 SH2B1Q9NRF2 756 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P23-201ENST00000414981 DCTN4Q9UJW0 460 aa6.8□□□□□ -1.32
HMGB3P23-201ENST00000414981 TM4SF5O14894 197 aa6.79□□□□□ -1.32
HMGB3P23-201ENST00000414981 FSCN2O14926 492 aa6.79□□□□□ -1.32
HMGB3P23-201ENST00000414981 CPNE3O75131 537 aaKnown RBP6.79□□□□□ -1.32
HMGB3P23-201ENST00000414981 TRPA1O75762 1119 aa6.79□□□□□ -1.32
HMGB3P23-201ENST00000414981 DOC2BQ14184 412 aa6.79□□□□□ -1.32
HMGB3P23-201ENST00000414981 TMC1Q8TDI8 760 aa6.79□□□□□ -1.32
HMGB3P23-201ENST00000414981 WFDC12Q8WWY7 111 aa6.79□□□□□ -1.32
HMGB3P23-201ENST00000414981 BSNDQ8WZ55 320 aa6.79□□□□□ -1.32
HMGB3P23-201ENST00000414981 ALKBH8Q96BT7 664 aaKnown RBP6.79□□□□□ -1.32
HMGB3P23-201ENST00000414981 BHLHE41Q9C0J9 482 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P23-201ENST00000414981 OSGEPQ9NPF4 335 aa6.79□□□□□ -1.32
HMGB3P23-201ENST00000414981 BIN2Q9UBW5 565 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P23-201ENST00000414981 H3BRJ5 948 aa6.78□□□□□ -1.32
HMGB3P23-201ENST00000414981 EPHA1P21709 976 aa6.78□□□□□ -1.32
HMGB3P23-201ENST00000414981 CD68P34810 354 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P23-201ENST00000414981 PIP4K2BP78356 416 aa6.78□□□□□ -1.32
HMGB3P23-201ENST00000414981 KIAA0319Q5VV43 1072 aa6.78□□□□□ -1.32
HMGB3P23-201ENST00000414981 GALNT11Q8NCW6 608 aa6.78□□□□□ -1.32
HMGB3P23-201ENST00000414981 NIF3L1Q9GZT8 377 aa6.78□□□□□ -1.32
HMGB3P23-201ENST00000414981 SOX13Q9UN79 622 aa6.78□□□□□ -1.32
HMGB3P23-201ENST00000414981 IVNS1ABPQ9Y6Y0 642 aa6.78□□□□□ -1.32
HMGB3P23-201ENST00000414981 ADAM23O75077 832 aa6.77□□□□□ -1.33
HMGB3P23-201ENST00000414981 POLR3DP05423 398 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P23-201ENST00000414981 FURINP09958 794 aa6.77□□□□□ -1.33
HMGB3P23-201ENST00000414981 HHIPQ96QV1 700 aa6.77□□□□□ -1.33
HMGB3P23-201ENST00000414981 SSBP4Q9BWG4 385 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P23-201ENST00000414981 SEC31BQ9NQW1 1179 aa6.77□□□□□ -1.33
HMGB3P23-201ENST00000414981 TPSG1Q9NRR2 321 aa6.77□□□□□ -1.33
HMGB3P23-201ENST00000414981 A0A1W2PP55 124 aa6.76□□□□□ -1.33
HMGB3P23-201ENST00000414981 F8W735 103 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P23-201ENST00000414981 EIF1AYO14602 144 aaKnown RBP6.76□□□□□ -1.33
HMGB3P23-201ENST00000414981 GPR182O15218 404 aa6.76□□□□□ -1.33
HMGB3P23-201ENST00000414981 EIF4EBP3O60516 100 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P23-201ENST00000414981 NOS3P29474 1203 aa6.76□□□□□ -1.33
HMGB3P23-201ENST00000414981 IREB2P48200 963 aaKnown RBP6.76□□□□□ -1.33
HMGB3P23-201ENST00000414981 ARL4DP49703 201 aa6.76□□□□□ -1.33
HMGB3P23-201ENST00000414981 PLCB3Q01970 1234 aa6.76□□□□□ -1.33
HMGB3P23-201ENST00000414981 ORC1Q13415 861 aa6.76□□□□□ -1.33
HMGB3P23-201ENST00000414981 SUZ12Q15022 739 aaKnown RBP6.76□□□□□ -1.33
HMGB3P23-201ENST00000414981 TMC7Q7Z402 723 aa6.76□□□□□ -1.33
HMGB3P23-201ENST00000414981 CCNJLQ8IV13 435 aa6.76□□□□□ -1.33
HMGB3P23-201ENST00000414981 AKTIPQ9H8T0 292 aa6.76□□□□□ -1.33
HMGB3P23-201ENST00000414981 LATS2Q9NRM7 1088 aa6.76□□□□□ -1.33
HMGB3P23-201ENST00000414981 K7ELQ4 463 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P23-201ENST00000414981 PDIA4P13667 645 aaKnown RBP6.75□□□□□ -1.33
HMGB3P23-201ENST00000414981 CDC25BP30305 580 aa6.75□□□□□ -1.33
HMGB3P23-201ENST00000414981 NKAPLQ5M9Q1 402 aa6.75□□□□□ -1.33
HMGB3P23-201ENST00000414981 USPL1Q5W0Q7 1092 aa6.75□□□□□ -1.33
HMGB3P23-201ENST00000414981 TXNDC11Q6PKC3 985 aa6.75□□□□□ -1.33
HMGB3P23-201ENST00000414981 VN1R5Q7Z5H4 357 aa6.75□□□□□ -1.33
HMGB3P23-201ENST00000414981 CCDC74AQ96AQ1 378 aa6.75□□□□□ -1.33
HMGB3P23-201ENST00000414981 KLHDC7BQ96G42 594 aa6.75□□□□□ -1.33
HMGB3P23-201ENST00000414981 CSRNP1Q96S65 589 aa6.75□□□□□ -1.33
HMGB3P23-201ENST00000414981 SOX1O00570 391 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P23-201ENST00000414981 H2AFB1P0C5Y9 115 aa6.74□□□□□ -1.33
HMGB3P23-201ENST00000414981 H2AFB2P0C5Z0 115 aa6.74□□□□□ -1.33
HMGB3P23-201ENST00000414981 IKBKEQ14164 716 aa6.74□□□□□ -1.33
HMGB3P23-201ENST00000414981 DSC3Q14574 896 aa6.74□□□□□ -1.33
HMGB3P23-201ENST00000414981 RSPO4Q2I0M5 234 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms