RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 RSBN1LQ6PCB5 846 aaPredicted RBP14.06□□□□□ -0.16
RFFL-204ENST00000414419 AGBL3Q8NEM8 1001 aa14.06□□□□□ -0.16
RFFL-204ENST00000414419 ZC3H15Q8WU90 426 aaKnown RBP14.06□□□□□ -0.16
RFFL-204ENST00000414419 FRAT1Q92837 279 aaPredicted RBP14.06□□□□□ -0.16
RFFL-204ENST00000414419 KAZALD1Q96I82 304 aa14.06□□□□□ -0.16
RFFL-204ENST00000414419 SHTN1A0MZ66 631 aa14.05□□□□□ -0.16
RFFL-204ENST00000414419 TBC1D10BQ4KMP7 808 aaPredicted RBP14.05□□□□□ -0.16
RFFL-204ENST00000414419 SAMD7Q7Z3H4 446 aa14.05□□□□□ -0.16
RFFL-204ENST00000414419 TXNRD3Q86VQ6 643 aa14.05□□□□□ -0.16
RFFL-204ENST00000414419 TRPM4Q8TD43 1214 aa14.05□□□□□ -0.16
RFFL-204ENST00000414419 ZBED9Q6R2W3 1325 aa14.05□□□□□ -0.16
RFFL-204ENST00000414419 TTLL5Q6EMB2 1281 aa14.04□□□□□ -0.16
RFFL-204ENST00000414419 ZNF804AQ7Z570 1209 aa14.04□□□□□ -0.16
RFFL-204ENST00000414419 ANKRD44Q8N8A2 993 aa14.04□□□□□ -0.16
RFFL-204ENST00000414419 SNAP23O00161 211 aa14.03□□□□□ -0.16
RFFL-204ENST00000414419 BCAR3O75815 825 aa14.03□□□□□ -0.16
RFFL-204ENST00000414419 USP17L8P0C7I0 530 aa14.03□□□□□ -0.16
RFFL-204ENST00000414419 KLRK1P26718 216 aa14.03□□□□□ -0.16
RFFL-204ENST00000414419 HIRAP54198 1017 aaPredicted RBP14.03□□□□□ -0.16
RFFL-204ENST00000414419 STRIP1Q5VSL9 837 aa14.03□□□□□ -0.16
RFFL-204ENST00000414419 CDC37L1Q7L3B6 337 aa14.03□□□□□ -0.16
RFFL-204ENST00000414419 OGFOD1Q8N543 542 aa14.03□□□□□ -0.16
RFFL-204ENST00000414419 PUS3Q9BZE2 481 aaKnown RBP14.03□□□□□ -0.16
RFFL-204ENST00000414419 PGAP2Q9UHJ9 254 aa14.03□□□□□ -0.16
RFFL-204ENST00000414419 MROH5Q6ZUA9 1318 aa14.03□□□□□ -0.16
RFFL-204ENST00000414419 MYO3BQ8WXR4 1341 aa14.03□□□□□ -0.16
RFFL-204ENST00000414419 UBE4AQ14139 1066 aa14.02□□□□□ -0.17
RFFL-204ENST00000414419 KIF4BQ2VIQ3 1234 aa14.02□□□□□ -0.17
RFFL-204ENST00000414419 METTL24Q5JXM2 366 aa14.02□□□□□ -0.17
RFFL-204ENST00000414419 ATF7IPQ6VMQ6 1270 aa14.02□□□□□ -0.17
RFFL-204ENST00000414419 C15orf52Q6ZUT6 534 aaKnown RBP14.02□□□□□ -0.17
RFFL-204ENST00000414419 DCPSQ96C86 337 aaKnown RBP14.02□□□□□ -0.17
RFFL-204ENST00000414419 CD209Q9NNX6 404 aa14.02□□□□□ -0.17
RFFL-204ENST00000414419 MKRN1Q9UHC7 482 aaKnown RBP14.02□□□□□ -0.17
RFFL-204ENST00000414419 ABT1Q9ULW3 272 aaKnown RBP14.02□□□□□ -0.17
RFFL-204ENST00000414419 GNAI3P08754 354 aa14.01□□□□□ -0.17
RFFL-204ENST00000414419 GTF2IP78347 998 aa14.01□□□□□ -0.17
RFFL-204ENST00000414419 DACT2Q5SW24 774 aa14.01□□□□□ -0.17
RFFL-204ENST00000414419 ZKSCAN2Q63HK3 967 aa14.01□□□□□ -0.17
RFFL-204ENST00000414419 INTS3Q68E01 1043 aaKnown RBP14.01□□□□□ -0.17
RFFL-204ENST00000414419 GLIS2Q9BZE0 524 aaPredicted RBP14.01□□□□□ -0.17
RFFL-204ENST00000414419 RIPOR2Q9Y4F9 1068 aa14.01□□□□□ -0.17
RFFL-204ENST00000414419 ZNF609O15014 1411 aa14□□□□□ -0.17
RFFL-204ENST00000414419 TRAF5O00463 557 aa14□□□□□ -0.17
RFFL-204ENST00000414419 EGFRP00533 1210 aa14□□□□□ -0.17
RFFL-204ENST00000414419 TRIM27P14373 513 aa14□□□□□ -0.17
RFFL-204ENST00000414419 MMP14P50281 582 aa14□□□□□ -0.17
RFFL-204ENST00000414419 ZNF280AP59817 542 aaPredicted RBP14□□□□□ -0.17
RFFL-204ENST00000414419 LRRC24Q50LG9 513 aa14□□□□□ -0.17
RFFL-204ENST00000414419 KLHDC4Q8TBB5 520 aa14□□□□□ -0.17
RFFL-204ENST00000414419 CLUAP1Q96AJ1 413 aa14□□□□□ -0.17
RFFL-204ENST00000414419 GMLQ99445 158 aa14□□□□□ -0.17
RFFL-204ENST00000414419 MYOZ2Q9NPC6 264 aa14□□□□□ -0.17
RFFL-204ENST00000414419 HDAC9Q9UKV0 1011 aa14□□□□□ -0.17
RFFL-204ENST00000414419 LRRFIP2Q9Y608 721 aaKnown RBP14□□□□□ -0.17
RFFL-204ENST00000414419 CELF2O95319 508 aaKnown RBP13.99□□□□□ -0.17
RFFL-204ENST00000414419 IL1R1P14778 569 aa13.99□□□□□ -0.17
RFFL-204ENST00000414419 HIBADHP31937 336 aaKnown RBP13.99□□□□□ -0.17
RFFL-204ENST00000414419 FMR1Q06787 632 aaKnown RBP eCLIP13.99□□□□□ -0.17
RFFL-204ENST00000414419 SCARF1Q14162 830 aa13.99□□□□□ -0.17
RFFL-204ENST00000414419 DEFB115Q30KQ5 88 aa13.99□□□□□ -0.17
RFFL-204ENST00000414419 KRT26Q7Z3Y9 468 aa13.99□□□□□ -0.17
RFFL-204ENST00000414419 USP48Q86UV5 1035 aa13.99□□□□□ -0.17
RFFL-204ENST00000414419 VPS37DQ86XT2 251 aa13.99□□□□□ -0.17
RFFL-204ENST00000414419 SULF1Q8IWU6 871 aa13.99□□□□□ -0.17
RFFL-204ENST00000414419 JMYQ8N9B5 988 aa13.99□□□□□ -0.17
RFFL-204ENST00000414419 MEIS3Q99687 375 aa13.99□□□□□ -0.17
RFFL-204ENST00000414419 MXD3Q9BW11 206 aa13.99□□□□□ -0.17
RFFL-204ENST00000414419 ZNF408Q9H9D4 720 aa13.99□□□□□ -0.17
RFFL-204ENST00000414419 IRS2Q9Y4H2 1338 aa13.98□□□□□ -0.17
RFFL-204ENST00000414419 EYA2O00167 538 aa13.98□□□□□ -0.17
RFFL-204ENST00000414419 PDE8BO95263 885 aa13.98□□□□□ -0.17
RFFL-204ENST00000414419 CAVIN4Q5BKX8 364 aa13.98□□□□□ -0.17
RFFL-204ENST00000414419 PAXIP1Q6ZW49 1069 aaPredicted RBP13.98□□□□□ -0.17
RFFL-204ENST00000414419 FTSJ3Q8IY81 847 aaKnown RBP13.98□□□□□ -0.17
RFFL-204ENST00000414419 GGA3Q9NZ52 723 aa13.98□□□□□ -0.17
RFFL-204ENST00000414419 ZNF646O15015 1829 aaPredicted RBP13.98□□□□□ -0.17
RFFL-204ENST00000414419 CNTNAP1P78357 1384 aa13.97□□□□□ -0.17
RFFL-204ENST00000414419 FRAT2O75474 233 aaPredicted RBP13.97□□□□□ -0.17
RFFL-204ENST00000414419 SASH1O94885 1247 aa13.97□□□□□ -0.17
RFFL-204ENST00000414419 GYG1P46976 350 aa13.97□□□□□ -0.17
RFFL-204ENST00000414419 PTPN12Q05209 780 aaKnown RBP13.97□□□□□ -0.17
RFFL-204ENST00000414419 CST9Q5W186 159 aa13.97□□□□□ -0.17
RFFL-204ENST00000414419 KIAA0825Q8IV33 1275 aa13.97□□□□□ -0.17
RFFL-204ENST00000414419 FBXO3Q9UK99 471 aa13.97□□□□□ -0.17
RFFL-204ENST00000414419 RASSF10A6NK89 507 aa13.96□□□□□ -0.17
RFFL-204ENST00000414419 IFIT1P09914 478 aaKnown RBP13.96□□□□□ -0.17
RFFL-204ENST00000414419 RFX5P48382 616 aaPredicted RBP13.96□□□□□ -0.17
RFFL-204ENST00000414419 PUM3Q15397 648 aaKnown RBP13.96□□□□□ -0.17
RFFL-204ENST00000414419 ANGEL2Q5VTE6 544 aaKnown RBP13.96□□□□□ -0.17
RFFL-204ENST00000414419 FAM84BQ96KN1 310 aaPredicted RBP13.96□□□□□ -0.17
RFFL-204ENST00000414419 SIL1Q9H173 461 aa13.96□□□□□ -0.17
RFFL-204ENST00000414419 GNAI2P04899 355 aa13.95□□□□□ -0.18
RFFL-204ENST00000414419 SLC5A1P13866 664 aa13.95□□□□□ -0.18
RFFL-204ENST00000414419 VEGFBP49765 207 aa13.95□□□□□ -0.18
RFFL-204ENST00000414419 FKBP1AP62942 108 aaKnown RBP13.95□□□□□ -0.18
RFFL-204ENST00000414419 TMEM57Q8N5G2 664 aa13.95□□□□□ -0.18
RFFL-204ENST00000414419 TDRD7Q8NHU6 1098 aaKnown RBP13.95□□□□□ -0.18
RFFL-204ENST00000414419 CEP126Q9P2H0 1117 aa13.95□□□□□ -0.18
RFFL-204ENST00000414419 TNNQ9UQP3 1299 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms