RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 TRIM28Q13263 835 aaKnown RBP3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 CRHR2Q13324 411 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 KIF22Q14807 665 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 SUPT20HL1Q3ZLR7 823 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 CCDC152Q4G0S7 254 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 RTL5Q5HYW3 569 aaPredicted RBP3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 DACT2Q5SW24 774 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 STRIP1Q5VSL9 837 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 ANKRD18AQ8IVF6 992 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 ZBTB38Q8NAP3 1195 aaPredicted RBP3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 NKX2-3Q8TAU0 364 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 ZNF428Q96B54 188 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 WNK4Q96J92 1243 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 ISCA1Q9BUE6 129 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 HTATIP2Q9BUP3 242 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 PCGF6Q9BYE7 350 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 COA1Q9GZY4 146 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 DEFB129Q9H1M3 183 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 ZFYVE28Q9HCC9 887 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 SEC31BQ9NQW1 1179 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 RBM27Q9P2N5 1060 aaKnown RBP3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 DBF4Q9UBU7 674 aaPredicted RBP3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 PPP2R3BQ9Y5P8 575 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 NR2E3Q9Y5X4 410 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 PTCH2Q9Y6C5 1203 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 MAPK8IP3Q9UPT6 1336 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 PAPPA2Q9BXP8 1791 aa3.09□□□□□ -1.91
RNU4-53P-201ENST00000410828 RANBP2P49792 3224 aaKnown RBP3.09□□□□□ -1.92
RNU4-53P-201ENST00000410828 AKAP11Q9UKA4 1901 aa3.09□□□□□ -1.92
RNU4-53P-201ENST00000410828 DUOX1Q9NRD9 1551 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 A0A1W2PPC1 479 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 TESPA1A2RU30 521 aaPredicted RBP3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 WTIPA6NIX2 430 aaPredicted RBP3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 MYO1BO43795 1136 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 PDE8AO60658 829 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 MYCP01106 439 aaPredicted RBP3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 GNRH1P01148 92 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 PRMT2P55345 433 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 RIPK4P57078 832 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 GOLGA2Q08379 1002 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 LMOD3Q0VAK6 560 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 DLGAP5Q15398 846 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 TAF1CQ15572 869 aaPredicted RBP3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 HDGFL1Q5TGJ6 251 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 TTLL5Q6EMB2 1281 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 RIC3Q7Z5B4 369 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 KIAA0825Q8IV33 1275 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 ANKRD13AQ8IZ07 590 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 FBXW7Q969H0 707 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 CLMNQ96JQ2 1002 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 PLEKHF1Q96S99 279 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 CDC5LQ99459 802 aaKnown RBP3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 MXD3Q9BW11 206 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 BSDC1Q9NW68 430 aaPredicted RBP3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 HYPKQ9NX55 129 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 CHPF2Q9P2E5 772 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 FZD1Q9UP38 647 aa3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 POLR2AP24928 1970 aaKnown RBP3.08□□□□□ -1.92
RNU4-53P-201ENST00000410828 SIPA1L3O60292 1781 aaPredicted RBP3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 HTTP42858 3142 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 CCL15-CCL14A0A0B4J2E2 113 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 TLR2O60603 784 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 USP2O75604 605 aaPredicted RBP3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 PCCAP05165 728 aaPredicted RBP3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 GJB1P08034 283 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 HOXB7P09629 217 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 HOXD10P28358 340 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 GJA5P36382 358 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 GJA8P48165 433 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 CCT4P50991 539 aaKnown RBP3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 GTF2A2P52657 109 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 GTF2IP78347 998 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 CAP1Q01518 475 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 TNFAIP1Q13829 316 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 CCL15Q16663 113 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 MTMR14Q8NCE2 650 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 CCDC191Q8NCU4 936 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 HELBQ8NG08 1087 aaPredicted RBP3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 SH3TC2Q8TF17 1288 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 BRI3BPQ8WY22 251 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 OPTNQ96CV9 577 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 ZBED3Q96IU2 234 aaPredicted RBP3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 MS4A4AQ96JQ5 239 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 CCDC85AQ96PX6 553 aaPredicted RBP3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 PTPN18Q99952 460 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 ANKRD2Q9GZV1 360 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 PRO3102Q9H379 93 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 ELP3Q9H9T3 547 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 MINPP1Q9UNW1 487 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 LEMD3Q9Y2U8 911 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 ZNF804BA4D1E1 1349 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 MED23Q9ULK4 1368 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 NUP98P52948 1817 aa3.07□□□□□ -1.92
RNU4-53P-201ENST00000410828 CLRN2A0PK11 232 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 SPDYE2BA6NHP3 402 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 CHL1O00533 1208 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 ZBTB7BO15156 539 aaPredicted RBP3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 EVI5O60447 810 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 NCOR1O75376 2440 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms