RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 GBA2Q9HCG7 927 aaPredicted RBP18.45■□□□□ 0.54
MCF2L-210ENST00000409954 ZNF609O15014 1411 aa18.44■□□□□ 0.54
MCF2L-210ENST00000409954 WTIPA6NIX2 430 aaPredicted RBP18.44■□□□□ 0.54
MCF2L-210ENST00000409954 CAPN15O75808 1086 aa18.44■□□□□ 0.54
MCF2L-210ENST00000409954 NOGQ13253 232 aa18.44■□□□□ 0.54
MCF2L-210ENST00000409954 CCDC102AQ96A19 550 aa18.44■□□□□ 0.54
MCF2L-210ENST00000409954 MYOZ2Q9NPC6 264 aa18.44■□□□□ 0.54
MCF2L-210ENST00000409954 ZNF804BA4D1E1 1349 aa18.44■□□□□ 0.54
MCF2L-210ENST00000409954 MYO3BQ8WXR4 1341 aa18.44■□□□□ 0.54
MCF2L-210ENST00000409954 COL4A1P02462 1669 aa18.44■□□□□ 0.54
MCF2L-210ENST00000409954 AOC2O75106 756 aa18.43■□□□□ 0.54
MCF2L-210ENST00000409954 BRPF1P55201 1214 aaPredicted RBP18.43■□□□□ 0.54
MCF2L-210ENST00000409954 IFIT5Q13325 482 aaKnown RBP18.43■□□□□ 0.54
MCF2L-210ENST00000409954 F6X3S4 739 aa18.42■□□□□ 0.54
MCF2L-210ENST00000409954 FOXO4P98177 505 aa18.42■□□□□ 0.54
MCF2L-210ENST00000409954 FAM161AQ3B820 660 aa18.42■□□□□ 0.54
MCF2L-210ENST00000409954 DACT2Q5SW24 774 aa18.42■□□□□ 0.54
MCF2L-210ENST00000409954 TTLL5Q6EMB2 1281 aa18.42■□□□□ 0.54
MCF2L-210ENST00000409954 RGMBQ6NW40 437 aa18.42■□□□□ 0.54
MCF2L-210ENST00000409954 GGA3Q9NZ52 723 aa18.42■□□□□ 0.54
MCF2L-210ENST00000409954 ADM5C9JUS6 153 aa18.41■□□□□ 0.54
MCF2L-210ENST00000409954 ALDH1L1O75891 902 aa18.41■□□□□ 0.54
MCF2L-210ENST00000409954 KCNJ4P48050 445 aa18.41■□□□□ 0.54
MCF2L-210ENST00000409954 CHRNDQ07001 517 aa18.41■□□□□ 0.54
MCF2L-210ENST00000409954 ANGEL2Q5VTE6 544 aaKnown RBP18.41■□□□□ 0.54
MCF2L-210ENST00000409954 DLK2Q6UY11 383 aa18.41■□□□□ 0.54
MCF2L-210ENST00000409954 C9orf78Q9NZ63 289 aaPredicted RBP18.41■□□□□ 0.54
MCF2L-210ENST00000409954 PITPNM2Q9BZ72 1349 aa18.41■□□□□ 0.54
MCF2L-210ENST00000409954 GRM8O00222 908 aa18.4■□□□□ 0.54
MCF2L-210ENST00000409954 FKBP1BP68106 108 aa18.4■□□□□ 0.54
MCF2L-210ENST00000409954 CCDC57Q2TAC2 916 aa18.4■□□□□ 0.54
MCF2L-210ENST00000409954 C15orf52Q6ZUT6 534 aaKnown RBP18.4■□□□□ 0.54
MCF2L-210ENST00000409954 TXNRD3Q86VQ6 643 aa18.4■□□□□ 0.54
MCF2L-210ENST00000409954 TRPM7Q96QT4 1865 aa18.39■□□□□ 0.54
MCF2L-210ENST00000409954 LMBR1LQ6UX01 489 aa18.39■□□□□ 0.53
MCF2L-210ENST00000409954 SRCIN1Q9C0H9 1055 aa18.39■□□□□ 0.53
MCF2L-210ENST00000409954 HDAC9Q9UKV0 1011 aa18.39■□□□□ 0.53
MCF2L-210ENST00000409954 ZNF157P51786 506 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-210ENST00000409954 FBXW7Q969H0 707 aa18.38■□□□□ 0.53
MCF2L-210ENST00000409954 CDCA5Q96FF9 252 aa18.38■□□□□ 0.53
MCF2L-210ENST00000409954 CD209Q9NNX6 404 aa18.38■□□□□ 0.53
MCF2L-210ENST00000409954 CHMP3Q9Y3E7 222 aa18.38■□□□□ 0.53
MCF2L-210ENST00000409954 GTF2IP78347 998 aa18.37■□□□□ 0.53
MCF2L-210ENST00000409954 SLC4A10Q6U841 1118 aa18.37■□□□□ 0.53
MCF2L-210ENST00000409954 LDHAL6AQ6ZMR3 332 aa18.37■□□□□ 0.53
MCF2L-210ENST00000409954 REM2Q8IYK8 340 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-210ENST00000409954 ASTN2O75129 1339 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-210ENST00000409954 ZNF521Q96K83 1311 aa18.37■□□□□ 0.53
MCF2L-210ENST00000409954 E9PSI1 815 aa18.36■□□□□ 0.53
MCF2L-210ENST00000409954 WNT10BO00744 389 aa18.36■□□□□ 0.53
MCF2L-210ENST00000409954 NBPF9Q3BBW0 867 aa18.36■□□□□ 0.53
MCF2L-210ENST00000409954 TAF7LQ5H9L4 462 aa18.36■□□□□ 0.53
MCF2L-210ENST00000409954 FAM155AB1AL88 458 aaPredicted RBP18.35■□□□□ 0.53
MCF2L-210ENST00000409954 TAF5LO75529 589 aa18.35■□□□□ 0.53
MCF2L-210ENST00000409954 HELBQ8NG08 1087 aaPredicted RBP18.35■□□□□ 0.53
MCF2L-210ENST00000409954 MXD3Q9BW11 206 aa18.35■□□□□ 0.53
MCF2L-210ENST00000409954 CNNM1Q9NRU3 951 aa18.35■□□□□ 0.53
MCF2L-210ENST00000409954 CACNA1FO60840 1977 aa18.35■□□□□ 0.53
MCF2L-210ENST00000409954 KIF23Q02241 960 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-210ENST00000409954 EPHA10Q5JZY3 1008 aa18.34■□□□□ 0.53
MCF2L-210ENST00000409954 ZNF804AQ7Z570 1209 aa18.34■□□□□ 0.53
MCF2L-210ENST00000409954 SCN9AQ15858 1988 aa18.33■□□□□ 0.53
MCF2L-210ENST00000409954 IL1R1P14778 569 aa18.33■□□□□ 0.52
MCF2L-210ENST00000409954 KLRK1P26718 216 aa18.33■□□□□ 0.52
MCF2L-210ENST00000409954 NF2P35240 595 aa18.33■□□□□ 0.52
MCF2L-210ENST00000409954 FKBP1AP62942 108 aaKnown RBP18.33■□□□□ 0.52
MCF2L-210ENST00000409954 KIAA0825Q8IV33 1275 aa18.33■□□□□ 0.52
MCF2L-210ENST00000409954 MRPL50Q8N5N7 158 aaKnown RBP18.33■□□□□ 0.52
MCF2L-210ENST00000409954 ZIC5Q96T25 663 aa18.33■□□□□ 0.52
MCF2L-210ENST00000409954 UTYO14607 1347 aa18.32■□□□□ 0.52
MCF2L-210ENST00000409954 PLIN1O60240 522 aa18.32■□□□□ 0.52
MCF2L-210ENST00000409954 SLC10A3P09131 477 aa18.32■□□□□ 0.52
MCF2L-210ENST00000409954 UBE4AQ14139 1066 aa18.32■□□□□ 0.52
MCF2L-210ENST00000409954 ABHD8Q96I13 439 aa18.32■□□□□ 0.52
MCF2L-210ENST00000409954 ZNF594Q96JF6 807 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-210ENST00000409954 SAGE1Q9NXZ1 904 aa18.32■□□□□ 0.52
MCF2L-210ENST00000409954 TSKSQ9UJT2 592 aa18.32■□□□□ 0.52
MCF2L-210ENST00000409954 PTPRCP08575 1304 aa18.31■□□□□ 0.52
MCF2L-210ENST00000409954 IRS2Q9Y4H2 1338 aa18.31■□□□□ 0.52
MCF2L-210ENST00000409954 SNAP23O00161 211 aa18.31■□□□□ 0.52
MCF2L-210ENST00000409954 SASH1O94885 1247 aa18.31■□□□□ 0.52
MCF2L-210ENST00000409954 SLFN5Q08AF3 891 aa18.31■□□□□ 0.52
MCF2L-210ENST00000409954 DLGAP5Q15398 846 aa18.31■□□□□ 0.52
MCF2L-210ENST00000409954 APOBEC3FQ8IUX4 373 aaKnown RBP18.31■□□□□ 0.52
MCF2L-210ENST00000409954 MTMR14Q8NCE2 650 aa18.31■□□□□ 0.52
MCF2L-210ENST00000409954 CSRNP1Q96S65 589 aa18.31■□□□□ 0.52
MCF2L-210ENST00000409954 ZBED3Q96IU2 234 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-210ENST00000409954 POLR2AP24928 1970 aaKnown RBP18.3■□□□□ 0.52
MCF2L-210ENST00000409954 MYH3P11055 1940 aa18.29■□□□□ 0.52
MCF2L-210ENST00000409954 NBPF7P0C2Y1 421 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-210ENST00000409954 SUCLG2Q96I99 432 aa18.29■□□□□ 0.52
MCF2L-210ENST00000409954 THSD7BQ9C0I4 1608 aa18.29■□□□□ 0.52
MCF2L-210ENST00000409954 UBE2Q2LH0YL09 131 aa18.28■□□□□ 0.52
MCF2L-210ENST00000409954 MYO1BO43795 1136 aa18.28■□□□□ 0.52
MCF2L-210ENST00000409954 TTLL12Q14166 644 aaPredicted RBP18.28■□□□□ 0.52
MCF2L-210ENST00000409954 ALDH1L2Q3SY69 923 aa18.28■□□□□ 0.52
MCF2L-210ENST00000409954 PRAMEF18Q5VWM3 479 aa18.28■□□□□ 0.52
MCF2L-210ENST00000409954 ARMC9Q7Z3E5 817 aa18.28■□□□□ 0.52
MCF2L-210ENST00000409954 KAZALD1Q96I82 304 aa18.28■□□□□ 0.52
MCF2L-210ENST00000409954 RNF186Q9NXI6 227 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms