RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 ZNF646O15015 1829 aaPredicted RBP27.85■■■□□ 2.05
PTCD3-203ENST00000409783 PDE8BO95263 885 aa27.85■■■□□ 2.05
PTCD3-203ENST00000409783 CEP85Q6P2H3 762 aa27.85■■■□□ 2.05
PTCD3-203ENST00000409783 SCN4AP35499 1836 aa27.85■■■□□ 2.05
PTCD3-203ENST00000409783 RAD17O75943 681 aa27.84■■■□□ 2.05
PTCD3-203ENST00000409783 CIAPIN1Q6FI81 312 aa27.84■■■□□ 2.05
PTCD3-203ENST00000409783 GJA3Q9Y6H8 435 aa27.83■■■□□ 2.05
PTCD3-203ENST00000409783 FGFR2P21802 821 aa27.82■■■□□ 2.04
PTCD3-203ENST00000409783 IL15P40933 162 aaPredicted RBP27.82■■■□□ 2.04
PTCD3-203ENST00000409783 PODNQ7Z5L7 613 aa27.82■■■□□ 2.04
PTCD3-203ENST00000409783 COA1Q9GZY4 146 aa27.82■■■□□ 2.04
PTCD3-203ENST00000409783 PSMD14O00487 310 aa27.81■■■□□ 2.04
PTCD3-203ENST00000409783 VEGFAP15692 232 aaPredicted RBP27.81■■■□□ 2.04
PTCD3-203ENST00000409783 G3V3G9 751 aa27.8■■■□□ 2.04
PTCD3-203ENST00000409783 SCNN1DP51172 638 aa27.8■■■□□ 2.04
PTCD3-203ENST00000409783 TNIP1Q15025 636 aa27.8■■■□□ 2.04
PTCD3-203ENST00000409783 DCAF8Q5TAQ9 597 aa27.8■■■□□ 2.04
PTCD3-203ENST00000409783 CHMP4BQ9H444 224 aaKnown RBP27.8■■■□□ 2.04
PTCD3-203ENST00000409783 CD209Q9NNX6 404 aa27.79■■■□□ 2.04
PTCD3-203ENST00000409783 PUM3Q15397 648 aaKnown RBP27.78■■■□□ 2.04
PTCD3-203ENST00000409783 FAM84BQ96KN1 310 aaPredicted RBP27.78■■■□□ 2.04
PTCD3-203ENST00000409783 CEP126Q9P2H0 1117 aa27.78■■■□□ 2.04
PTCD3-203ENST00000409783 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.78■■■□□ 2.04
PTCD3-203ENST00000409783 VIL1P09327 827 aaKnown RBP27.77■■■□□ 2.04
PTCD3-203ENST00000409783 SIRT2Q8IXJ6 389 aa27.77■■■□□ 2.04
PTCD3-203ENST00000409783 IL1R1P14778 569 aa27.76■■■□□ 2.03
PTCD3-203ENST00000409783 GYG1P46976 350 aa27.76■■■□□ 2.03
PTCD3-203ENST00000409783 GMPSP49915 693 aaPredicted RBP27.76■■■□□ 2.03
PTCD3-203ENST00000409783 RPAP2Q8IXW5 612 aaPredicted RBP27.76■■■□□ 2.03
PTCD3-203ENST00000409783 NOP58Q9Y2X3 529 aaKnown RBP27.76■■■□□ 2.03
PTCD3-203ENST00000409783 ZNF609O15014 1411 aa27.75■■■□□ 2.03
PTCD3-203ENST00000409783 ZNF804AQ7Z570 1209 aa27.75■■■□□ 2.03
PTCD3-203ENST00000409783 FBXO33Q7Z6M2 555 aa27.75■■■□□ 2.03
PTCD3-203ENST00000409783 TAF1DQ9H5J8 278 aaPredicted RBP27.75■■■□□ 2.03
PTCD3-203ENST00000409783 HACL1Q9UJ83 578 aa27.75■■■□□ 2.03
PTCD3-203ENST00000409783 ZBTB12Q9Y330 459 aaPredicted RBP27.75■■■□□ 2.03
PTCD3-203ENST00000409783 ARAP2Q8WZ64 1704 aa27.75■■■□□ 2.03
PTCD3-203ENST00000409783 IQCA1LA6NCM1 817 aa27.74■■■□□ 2.03
PTCD3-203ENST00000409783 USP17L3A6NCW0 530 aa27.74■■■□□ 2.03
PTCD3-203ENST00000409783 USP17L4A6NCW7 530 aa27.74■■■□□ 2.03
PTCD3-203ENST00000409783 SASH1O94885 1247 aa27.74■■■□□ 2.03
PTCD3-203ENST00000409783 TFCP2Q12800 502 aa27.74■■■□□ 2.03
PTCD3-203ENST00000409783 USP17L1Q7RTZ2 530 aa27.74■■■□□ 2.03
PTCD3-203ENST00000409783 LPIN2Q92539 896 aa27.74■■■□□ 2.03
PTCD3-203ENST00000409783 GPRC5DQ9NZD1 345 aa27.74■■■□□ 2.03
PTCD3-203ENST00000409783 EPS15P42566 896 aa27.73■■■□□ 2.03
PTCD3-203ENST00000409783 G3BP1Q13283 466 aaKnown RBP eCLIP27.73■■■□□ 2.03
PTCD3-203ENST00000409783 ATP2B3Q16720 1220 aa27.73■■■□□ 2.03
PTCD3-203ENST00000409783 DACT2Q5SW24 774 aa27.73■■■□□ 2.03
PTCD3-203ENST00000409783 SUPT16HQ9Y5B9 1047 aaKnown RBP27.73■■■□□ 2.03
PTCD3-203ENST00000409783 SURF6O75683 361 aaKnown RBP27.72■■■□□ 2.03
PTCD3-203ENST00000409783 HIBADHP31937 336 aaKnown RBP27.72■■■□□ 2.03
PTCD3-203ENST00000409783 RSBN1LQ6PCB5 846 aaPredicted RBP27.72■■■□□ 2.03
PTCD3-203ENST00000409783 TDRD7Q8NHU6 1098 aaKnown RBP27.72■■■□□ 2.03
PTCD3-203ENST00000409783 DPF2Q92785 391 aa27.72■■■□□ 2.03
PTCD3-203ENST00000409783 CRBNQ96SW2 442 aa27.72■■■□□ 2.03
PTCD3-203ENST00000409783 GMLQ99445 158 aa27.72■■■□□ 2.03
PTCD3-203ENST00000409783 ADAMTSL1Q8N6G6 1762 aa27.72■■■□□ 2.03
PTCD3-203ENST00000409783 IFIT1P09914 478 aaKnown RBP27.71■■■□□ 2.03
PTCD3-203ENST00000409783 SLC5A1P13866 664 aa27.71■■■□□ 2.03
PTCD3-203ENST00000409783 RPS12P25398 132 aaKnown RBP27.71■■■□□ 2.03
PTCD3-203ENST00000409783 EPHX2P34913 555 aa27.71■■■□□ 2.03
PTCD3-203ENST00000409783 STRIP1Q5VSL9 837 aa27.71■■■□□ 2.03
PTCD3-203ENST00000409783 SHTN1A0MZ66 631 aa27.7■■■□□ 2.02
PTCD3-203ENST00000409783 TOMM70O94826 608 aa27.7■■■□□ 2.02
PTCD3-203ENST00000409783 BCAMP50895 628 aa27.7■■■□□ 2.02
PTCD3-203ENST00000409783 POTEIP0CG38 1075 aa27.69■■■□□ 2.02
PTCD3-203ENST00000409783 POTEJP0CG39 1038 aa27.69■■■□□ 2.02
PTCD3-203ENST00000409783 LMOD1P29536 600 aaPredicted RBP27.69■■■□□ 2.02
PTCD3-203ENST00000409783 GTF2IP78347 998 aa27.69■■■□□ 2.02
PTCD3-203ENST00000409783 TTLL5Q6EMB2 1281 aa27.69■■■□□ 2.02
PTCD3-203ENST00000409783 AGBL3Q8NEM8 1001 aa27.69■■■□□ 2.02
PTCD3-203ENST00000409783 MXD3Q9BW11 206 aa27.69■■■□□ 2.02
PTCD3-203ENST00000409783 CNOT7Q9UIV1 285 aaKnown RBP27.68■■■□□ 2.02
PTCD3-203ENST00000409783 ADORA1P30542 326 aa27.67■■■□□ 2.02
PTCD3-203ENST00000409783 TIMM10P62072 90 aa27.67■■■□□ 2.02
PTCD3-203ENST00000409783 CAVIN4Q5BKX8 364 aa27.67■■■□□ 2.02
PTCD3-203ENST00000409783 RBM46Q8TBY0 533 aaKnown RBP27.67■■■□□ 2.02
PTCD3-203ENST00000409783 FAM205AQ6ZU69 1335 aa27.67■■■□□ 2.02
PTCD3-203ENST00000409783 A0A1B0GUL7 405 aa27.66■■■□□ 2.02
PTCD3-203ENST00000409783 HMMRO75330 724 aa27.66■■■□□ 2.02
PTCD3-203ENST00000409783 MICALL2Q8IY33 904 aa27.66■■■□□ 2.02
PTCD3-203ENST00000409783 C16orf71Q8IYS4 520 aaPredicted RBP27.66■■■□□ 2.02
PTCD3-203ENST00000409783 EXOC6BQ9Y2D4 811 aa27.66■■■□□ 2.02
PTCD3-203ENST00000409783 AKAP2Q9Y2D5 859 aa27.66■■■□□ 2.02
PTCD3-203ENST00000409783 CERS5Q8N5B7 392 aa27.65■■■□□ 2.02
PTCD3-203ENST00000409783 FBXW7Q969H0 707 aa27.65■■■□□ 2.02
PTCD3-203ENST00000409783 GPR108Q9NPR9 543 aa27.65■■■□□ 2.02
PTCD3-203ENST00000409783 ADARB2Q9NS39 739 aaKnown RBP27.65■■■□□ 2.02
PTCD3-203ENST00000409783 PCDHB15Q9Y5E8 787 aa27.65■■■□□ 2.02
PTCD3-203ENST00000409783 MYH13Q9UKX3 1938 aa27.65■■■□□ 2.02
PTCD3-203ENST00000409783 OS9Q13438 667 aaPredicted RBP27.64■■■□□ 2.02
PTCD3-203ENST00000409783 PNMA8AQ86V59 439 aaPredicted RBP27.64■■■□□ 2.02
PTCD3-203ENST00000409783 VPS37DQ86XT2 251 aa27.64■■■□□ 2.02
PTCD3-203ENST00000409783 IQSEC3Q9UPP2 1182 aaPredicted RBP27.64■■■□□ 2.02
PTCD3-203ENST00000409783 MYO3BQ8WXR4 1341 aa27.64■■■□□ 2.01
PTCD3-203ENST00000409783 ZNF280AP59817 542 aaPredicted RBP27.63■■■□□ 2.01
PTCD3-203ENST00000409783 USP50Q70EL3 339 aaPredicted RBP27.63■■■□□ 2.01
PTCD3-203ENST00000409783 JAG2Q9Y219 1238 aa27.63■■■□□ 2.01
PTCD3-203ENST00000409783 ZBTB22O15209 634 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms