RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 RIMBP2O15034 1052 aa20.39■□□□□ 0.85
TSPAN4-208ENST00000409531 ATP2B4P23634 1241 aa20.39■□□□□ 0.85
TSPAN4-208ENST00000409531 CENPQQ7L2Z9 268 aaPredicted RBP20.39■□□□□ 0.85
TSPAN4-208ENST00000409531 RIPOR2Q9Y4F9 1068 aa20.39■□□□□ 0.85
TSPAN4-208ENST00000409531 MROH5Q6ZUA9 1318 aa20.39■□□□□ 0.85
TSPAN4-208ENST00000409531 IQCA1LA6NCM1 817 aa20.38■□□□□ 0.85
TSPAN4-208ENST00000409531 UFL1O94874 794 aa20.38■□□□□ 0.85
TSPAN4-208ENST00000409531 LRRC24Q50LG9 513 aa20.38■□□□□ 0.85
TSPAN4-208ENST00000409531 B4GALNT3Q6L9W6 998 aa20.38■□□□□ 0.85
TSPAN4-208ENST00000409531 SMC5Q8IY18 1101 aa20.38■□□□□ 0.85
TSPAN4-208ENST00000409531 RBM46Q8TBY0 533 aaKnown RBP20.38■□□□□ 0.85
TSPAN4-208ENST00000409531 PUS3Q9BZE2 481 aaKnown RBP20.38■□□□□ 0.85
TSPAN4-208ENST00000409531 ZBTB47Q9UFB7 747 aaPredicted RBP20.38■□□□□ 0.85
TSPAN4-208ENST00000409531 GJA3Q9Y6H8 435 aa20.38■□□□□ 0.85
TSPAN4-208ENST00000409531 A0A1B0GUL6 1792 aa20.38■□□□□ 0.85
TSPAN4-208ENST00000409531 CXCL9Q07325 125 aa20.37■□□□□ 0.85
TSPAN4-208ENST00000409531 ATG9AQ7Z3C6 839 aa20.37■□□□□ 0.85
TSPAN4-208ENST00000409531 KIF1BPQ96EK5 621 aa20.37■□□□□ 0.85
TSPAN4-208ENST00000409531 ANKRD2Q9GZV1 360 aa20.37■□□□□ 0.85
TSPAN4-208ENST00000409531 CEP126Q9P2H0 1117 aa20.37■□□□□ 0.85
TSPAN4-208ENST00000409531 DUOX1Q9NRD9 1551 aa20.37■□□□□ 0.85
TSPAN4-208ENST00000409531 WDR90Q96KV7 1748 aa20.36■□□□□ 0.85
TSPAN4-208ENST00000409531 METTL24Q5JXM2 366 aa20.36■□□□□ 0.85
TSPAN4-208ENST00000409531 LRRCC1Q9C099 1032 aa20.36■□□□□ 0.85
TSPAN4-208ENST00000409531 TNIP1Q15025 636 aa20.35■□□□□ 0.85
TSPAN4-208ENST00000409531 GPR101Q96P66 508 aaPredicted RBP20.35■□□□□ 0.85
TSPAN4-208ENST00000409531 LEMD3Q9Y2U8 911 aa20.35■□□□□ 0.85
TSPAN4-208ENST00000409531 YDJCA8MPS7 323 aa20.34■□□□□ 0.85
TSPAN4-208ENST00000409531 G3V3G9 751 aa20.34■□□□□ 0.85
TSPAN4-208ENST00000409531 APBB1O00213 710 aa20.34■□□□□ 0.85
TSPAN4-208ENST00000409531 CHRNDQ07001 517 aa20.34■□□□□ 0.85
TSPAN4-208ENST00000409531 DOK7Q18PE1 504 aa20.34■□□□□ 0.85
TSPAN4-208ENST00000409531 DCAF8Q5TAQ9 597 aa20.34■□□□□ 0.85
TSPAN4-208ENST00000409531 CIAPIN1Q6FI81 312 aa20.34■□□□□ 0.85
TSPAN4-208ENST00000409531 DNAJC5GQ8N7S2 189 aa20.34■□□□□ 0.85
TSPAN4-208ENST00000409531 RHPN1Q8TCX5 695 aa20.34■□□□□ 0.85
TSPAN4-208ENST00000409531 DBNDD1Q9H9R9 158 aa20.34■□□□□ 0.85
TSPAN4-208ENST00000409531 HACL1Q9UJ83 578 aa20.34■□□□□ 0.85
TSPAN4-208ENST00000409531 WTIPA6NIX2 430 aaPredicted RBP20.33■□□□□ 0.85
TSPAN4-208ENST00000409531 RAD17O75943 681 aa20.33■□□□□ 0.85
TSPAN4-208ENST00000409531 SASH1O94885 1247 aa20.33■□□□□ 0.85
TSPAN4-208ENST00000409531 APLP1P51693 650 aa20.33■□□□□ 0.85
TSPAN4-208ENST00000409531 FSTL1Q12841 308 aa20.33■□□□□ 0.85
TSPAN4-208ENST00000409531 TAF1DQ9H5J8 278 aaPredicted RBP20.33■□□□□ 0.85
TSPAN4-208ENST00000409531 AKAP2Q9Y2D5 859 aa20.33■□□□□ 0.85
TSPAN4-208ENST00000409531 PDE8BO95263 885 aa20.32■□□□□ 0.84
TSPAN4-208ENST00000409531 TFCP2Q12800 502 aa20.32■□□□□ 0.84
TSPAN4-208ENST00000409531 ANKRD45Q5TZF3 282 aa20.32■□□□□ 0.84
TSPAN4-208ENST00000409531 CLASRPQ8N2M8 674 aaKnown RBP20.32■□□□□ 0.84
TSPAN4-208ENST00000409531 SMC1BQ8NDV3 1235 aa20.32■□□□□ 0.84
TSPAN4-208ENST00000409531 GPR108Q9NPR9 543 aa20.32■□□□□ 0.84
TSPAN4-208ENST00000409531 LTBP1Q14766 1721 aa20.32■□□□□ 0.84
TSPAN4-208ENST00000409531 ECE2O60344 883 aa20.31■□□□□ 0.84
TSPAN4-208ENST00000409531 LMOD1P29536 600 aaPredicted RBP20.31■□□□□ 0.84
TSPAN4-208ENST00000409531 VGLL2Q8N8G2 317 aa20.31■□□□□ 0.84
TSPAN4-208ENST00000409531 ZNF804BA4D1E1 1349 aa20.31■□□□□ 0.84
TSPAN4-208ENST00000409531 EPHX2P34913 555 aa20.3■□□□□ 0.84
TSPAN4-208ENST00000409531 SCNN1DP51172 638 aa20.3■□□□□ 0.84
TSPAN4-208ENST00000409531 NUCB1Q02818 461 aa20.3■□□□□ 0.84
TSPAN4-208ENST00000409531 PUM3Q15397 648 aaKnown RBP20.3■□□□□ 0.84
TSPAN4-208ENST00000409531 PNMA8AQ86V59 439 aaPredicted RBP20.3■□□□□ 0.84
TSPAN4-208ENST00000409531 KCNJ4P48050 445 aa20.29■□□□□ 0.84
TSPAN4-208ENST00000409531 UBE4AQ14139 1066 aa20.29■□□□□ 0.84
TSPAN4-208ENST00000409531 PODNQ7Z5L7 613 aa20.29■□□□□ 0.84
TSPAN4-208ENST00000409531 HELBQ8NG08 1087 aaPredicted RBP20.29■□□□□ 0.84
TSPAN4-208ENST00000409531 KCNQ5Q9NR82 932 aa20.29■□□□□ 0.84
TSPAN4-208ENST00000409531 MED23Q9ULK4 1368 aa20.29■□□□□ 0.84
TSPAN4-208ENST00000409531 SCN4AP35499 1836 aa20.29■□□□□ 0.84
TSPAN4-208ENST00000409531 TAF5LO75529 589 aa20.28■□□□□ 0.84
TSPAN4-208ENST00000409531 EPS15P42566 896 aa20.28■□□□□ 0.84
TSPAN4-208ENST00000409531 ATP2B3Q16720 1220 aa20.28■□□□□ 0.84
TSPAN4-208ENST00000409531 CHD1LQ86WJ1 897 aa20.28■□□□□ 0.84
TSPAN4-208ENST00000409531 IL1RAPL2Q9NP60 686 aa20.28■□□□□ 0.84
TSPAN4-208ENST00000409531 GPRC5DQ9NZD1 345 aa20.28■□□□□ 0.84
TSPAN4-208ENST00000409531 ARAP2Q8WZ64 1704 aa20.28■□□□□ 0.84
TSPAN4-208ENST00000409531 ZNF609O15014 1411 aa20.28■□□□□ 0.84
TSPAN4-208ENST00000409531 PSMD14O00487 310 aa20.27■□□□□ 0.84
TSPAN4-208ENST00000409531 CAPN15O75808 1086 aa20.27■□□□□ 0.84
TSPAN4-208ENST00000409531 SLC5A1P13866 664 aa20.27■□□□□ 0.84
TSPAN4-208ENST00000409531 GMPSP49915 693 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-208ENST00000409531 HTRA3P83110 453 aa20.27■□□□□ 0.84
TSPAN4-208ENST00000409531 TNNI3KQ59H18 835 aa20.27■□□□□ 0.84
TSPAN4-208ENST00000409531 LPIN2Q92539 896 aa20.27■□□□□ 0.84
TSPAN4-208ENST00000409531 FPGT-TNNI3KV9GXZ4 949 aa20.27■□□□□ 0.84
TSPAN4-208ENST00000409531 SMARCA5O60264 1052 aaPredicted RBP20.27■□□□□ 0.83
TSPAN4-208ENST00000409531 IFIT2P09913 472 aaKnown RBP20.27■□□□□ 0.83
TSPAN4-208ENST00000409531 IFIT1P09914 478 aaKnown RBP20.27■□□□□ 0.83
TSPAN4-208ENST00000409531 POTEIP0CG38 1075 aa20.27■□□□□ 0.83
TSPAN4-208ENST00000409531 POTEJP0CG39 1038 aa20.27■□□□□ 0.83
TSPAN4-208ENST00000409531 EAPPQ56P03 285 aaPredicted RBP20.27■□□□□ 0.83
TSPAN4-208ENST00000409531 CHADLQ6NUI6 762 aa20.27■□□□□ 0.83
TSPAN4-208ENST00000409531 TXNRD3Q86VQ6 643 aa20.27■□□□□ 0.83
TSPAN4-208ENST00000409531 LDHDQ86WU2 507 aa20.27■□□□□ 0.83
TSPAN4-208ENST00000409531 DPF2Q92785 391 aa20.27■□□□□ 0.83
TSPAN4-208ENST00000409531 COA1Q9GZY4 146 aa20.27■□□□□ 0.83
TSPAN4-208ENST00000409531 A0A1B0GUL7 405 aa20.26■□□□□ 0.83
TSPAN4-208ENST00000409531 SNAP23O00161 211 aa20.26■□□□□ 0.83
TSPAN4-208ENST00000409531 VIL1P09327 827 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-208ENST00000409531 FGFR2P21802 821 aa20.26■□□□□ 0.83
TSPAN4-208ENST00000409531 COL13A1Q5TAT6 717 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms