RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 FOXR1Q6PIV2 292 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 G2E3Q7L622 706 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.73□□□□□ -1.335e-7■■■■□ 20.1
R3HDM1-202ENST00000409478 MICALL1Q8N3F8 863 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 GPATCH3Q96I76 525 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 CABP1Q9NZU7 370 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 FAN1Q9Y2M0 1017 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 RBM8AQ9Y5S9 174 aaKnown RBP6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 PIK3C2BO00750 1634 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 FANCGO15287 622 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 SURF6O75683 361 aaKnown RBP6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 ERLIN2O94905 339 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 PRR29P0C7W0 189 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 TDO2P48775 406 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 CHMP4BP1P59074 171 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 NAA16Q6N069 864 aaPredicted RBP6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 BRF1Q92994 677 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 SDF4Q9BRK5 362 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 HMG20BQ9P0W2 317 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 AKAP2Q9Y2D5 859 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 RIMBP3CA6NJZ7 1639 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 RIMBP3BA6NNM3 1639 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 RIMBP3Q9UFD9 1639 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 MINK1Q8N4C8 1332 aaPredicted RBP6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 FANCCQ00597 558 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 POLA2Q14181 598 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 SRGAP1Q7Z6B7 1085 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 FSIP1Q8NA03 581 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 MSANTD4Q8NCY6 345 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 CNNM3Q8NE01 707 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 MAP4K1Q92918 833 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 KIAA1468Q9P260 1216 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 SLC27A2O14975 620 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 DTNBO60941 627 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 CALRP27797 417 aaKnown RBP6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 MNAT1P51948 309 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 MRPS27Q92552 414 aaKnown RBP6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 KIFC2Q96AC6 838 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 EVI5LQ96CN4 794 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 L1RE1Q9UN81 338 aa6.73□□□□□ -1.33
R3HDM1-202ENST00000409478 N4BP2Q86UW6 1770 aaPredicted RBP6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 NLRP12P59046 1061 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 FLIIQ13045 1269 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 TOB2Q14106 344 aaPredicted RBP6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 POTEDQ86YR6 584 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 CTCFLQ8NI51 663 aaPredicted RBP6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 CCDC102AQ96A19 550 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 LLPHQ9BRT6 129 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 CDK19Q9BWU1 502 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 CRB1P82279 1406 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 A0A1W2PQ27 194 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 A0A1W2PQ64 194 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 A0A1W2PQD8 194 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 IFIT2P09913 472 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 TOP1P11387 765 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 KRT32Q14532 448 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 SNRKQ9NRH2 765 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 EDC4Q6P2E9 1401 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 XRN1Q8IZH2 1706 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 STX10O60499 249 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 RAPGEF3O95398 923 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 ADD1P35611 737 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 ME1P48163 572 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 DPCR1Q3MIW9 517 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 MCM10Q7L590 875 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 FMR1NBQ8N0W7 255 aaPredicted RBP6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 AFAP1L1Q8TED9 768 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 BICC1Q9H694 974 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 VIPAS39Q9H9C1 493 aa6.72□□□□□ -1.33
R3HDM1-202ENST00000409478 FBLN1P23142 703 aa6.71□□□□□ -1.33
R3HDM1-202ENST00000409478 UBASH3AP57075 661 aa6.71□□□□□ -1.33
R3HDM1-202ENST00000409478 CEBPZQ03701 1054 aaKnown RBP6.71□□□□□ -1.33
R3HDM1-202ENST00000409478 VSTM4Q8IW00 320 aa6.71□□□□□ -1.33
R3HDM1-202ENST00000409478 FAM177A1Q8N128 213 aaPredicted RBP6.71□□□□□ -1.33
R3HDM1-202ENST00000409478 STAG1Q8WVM7 1258 aa6.71□□□□□ -1.33
R3HDM1-202ENST00000409478 DHX58Q96C10 678 aa6.71□□□□□ -1.33
R3HDM1-202ENST00000409478 WDR24Q96S15 920 aa6.71□□□□□ -1.33
R3HDM1-202ENST00000409478 ANKZF1Q9H8Y5 726 aa6.71□□□□□ -1.33
R3HDM1-202ENST00000409478 A1CFQ9NQ94 594 aaKnown RBP6.71□□□□□ -1.33
R3HDM1-202ENST00000409478 TSPYL4Q9UJ04 414 aa6.71□□□□□ -1.33
R3HDM1-202ENST00000409478 NRKQ7Z2Y5 1582 aa6.71□□□□□ -1.33
R3HDM1-202ENST00000409478 CUTAO60888 179 aa6.71□□□□□ -1.34
R3HDM1-202ENST00000409478 SERPINC1P01008 464 aa6.71□□□□□ -1.34
R3HDM1-202ENST00000409478 CASP8Q14790 479 aa6.71□□□□□ -1.34
R3HDM1-202ENST00000409478 ADALQ6DHV7 355 aa6.71□□□□□ -1.34
R3HDM1-202ENST00000409478 TTLL5Q6EMB2 1281 aa6.71□□□□□ -1.34
R3HDM1-202ENST00000409478 PPP1R42Q7Z4L9 355 aa6.71□□□□□ -1.34
R3HDM1-202ENST00000409478 CCDC12Q8WUD4 166 aaPredicted RBP6.71□□□□□ -1.34
R3HDM1-202ENST00000409478 BAG1Q99933 345 aaPredicted RBP6.71□□□□□ -1.34
R3HDM1-202ENST00000409478 FAM204AQ9H8W3 233 aa6.71□□□□□ -1.34
R3HDM1-202ENST00000409478 STK26Q9P289 416 aa6.71□□□□□ -1.34
R3HDM1-202ENST00000409478 STK3Q13188 491 aa6.71□□□□□ -1.34
R3HDM1-202ENST00000409478 NCAPHQ15003 741 aa6.71□□□□□ -1.34
R3HDM1-202ENST00000409478 NUTM2DQ5VT03 806 aaPredicted RBP6.71□□□□□ -1.34
R3HDM1-202ENST00000409478 FBXW7Q969H0 707 aa6.71□□□□□ -1.34
R3HDM1-202ENST00000409478 ECHDC1Q9NTX5 307 aa6.71□□□□□ -1.34
R3HDM1-202ENST00000409478 CFAP100Q494V2 611 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 USP44Q9H0E7 712 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 ABCB6Q9NP58 842 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 A0A087WWV3 80 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms