RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 VGLL2Q8N8G2 317 aa18.04■□□□□ 0.48
SCAMP4-202ENST00000409472 TMEM87AQ8NBN3 555 aa18.04■□□□□ 0.48
SCAMP4-202ENST00000409472 MYH7P12883 1935 aa18.04■□□□□ 0.48
SCAMP4-202ENST00000409472 MCAMP43121 646 aa18.04■□□□□ 0.48
SCAMP4-202ENST00000409472 PIP4K2BP78356 416 aa18.04■□□□□ 0.48
SCAMP4-202ENST00000409472 CCDC158Q5M9N0 1113 aa18.04■□□□□ 0.48
SCAMP4-202ENST00000409472 BRF1Q92994 677 aa18.04■□□□□ 0.48
SCAMP4-202ENST00000409472 ALDH8A1Q9H2A2 487 aaPredicted RBP18.04■□□□□ 0.48
SCAMP4-202ENST00000409472 LRP5O75197 1615 aa18.04■□□□□ 0.48
SCAMP4-202ENST00000409472 COL4A1P02462 1669 aa18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 SNAP23O00161 211 aa18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 HCLS1P14317 486 aaPredicted RBP18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 CRKLP46109 303 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 KRT32Q14532 448 aa18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 CHST3Q7LGC8 479 aa18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 ZNF34Q8IZ26 560 aa18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 KCNQ2O43526 872 aa18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 ATP6V1AP38606 617 aa18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 EIF5P55010 431 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 ANKRD1Q15327 319 aa18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 LARP1BQ659C4 914 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 LRSAM1Q6UWE0 723 aa18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 HELBQ8NG08 1087 aaPredicted RBP18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 GTF3C6Q969F1 213 aa18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 DSCC1Q9BVC3 393 aa18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 CNNM1Q9NRU3 951 aa18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 AKAP2Q9Y2D5 859 aa18.03■□□□□ 0.48
SCAMP4-202ENST00000409472 ANKRD18BA2A2Z9 1011 aa18.02■□□□□ 0.48
SCAMP4-202ENST00000409472 SUSD4Q5VX71 490 aa18.02■□□□□ 0.48
SCAMP4-202ENST00000409472 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.02■□□□□ 0.48
SCAMP4-202ENST00000409472 PUS7LQ9H0K6 701 aaKnown RBP18.02■□□□□ 0.48
SCAMP4-202ENST00000409472 FBXO3Q9UK99 471 aa18.02■□□□□ 0.48
SCAMP4-202ENST00000409472 PRDM4Q9UKN5 801 aa18.02■□□□□ 0.48
SCAMP4-202ENST00000409472 SPATA31A5Q5VU36 1347 aa18.02■□□□□ 0.48
SCAMP4-202ENST00000409472 SPATA31A7Q8IWB4 1347 aa18.02■□□□□ 0.48
SCAMP4-202ENST00000409472 PPFIA3O75145 1194 aa18.02■□□□□ 0.47
SCAMP4-202ENST00000409472 LOC102724428A0A0B4J2F2 783 aa18.01■□□□□ 0.47
SCAMP4-202ENST00000409472 A0A0U1RQG5 324 aaPredicted RBP18.01■□□□□ 0.47
SCAMP4-202ENST00000409472 HSP90B1P14625 803 aaKnown RBP18.01■□□□□ 0.47
SCAMP4-202ENST00000409472 SIK1P57059 783 aa18.01■□□□□ 0.47
SCAMP4-202ENST00000409472 WASHC4Q2M389 1173 aa18.01■□□□□ 0.47
SCAMP4-202ENST00000409472 RNF214Q8ND24 703 aa18.01■□□□□ 0.47
SCAMP4-202ENST00000409472 CCDC87Q9NVE4 849 aa18.01■□□□□ 0.47
SCAMP4-202ENST00000409472 DDX60Q8IY21 1712 aaKnown RBP18.01■□□□□ 0.47
SCAMP4-202ENST00000409472 ERVV-1B6SEH8 477 aa18.01■□□□□ 0.47
SCAMP4-202ENST00000409472 E7EWF7 191 aa18.01■□□□□ 0.47
SCAMP4-202ENST00000409472 PDE8AO60658 829 aa18.01■□□□□ 0.47
SCAMP4-202ENST00000409472 KCNQ4P56696 695 aa18.01■□□□□ 0.47
SCAMP4-202ENST00000409472 HAND2P61296 217 aa18.01■□□□□ 0.47
SCAMP4-202ENST00000409472 RREB1Q92766 1687 aa18■□□□□ 0.47
SCAMP4-202ENST00000409472 APOBRQ0VD83 1088 aa18■□□□□ 0.47
SCAMP4-202ENST00000409472 SCRN1Q12765 414 aa18■□□□□ 0.47
SCAMP4-202ENST00000409472 TRIM44Q96DX7 344 aaPredicted RBP18■□□□□ 0.47
SCAMP4-202ENST00000409472 DDX11Q96FC9 970 aa18■□□□□ 0.47
SCAMP4-202ENST00000409472 GPHNQ9NQX3 736 aaPredicted RBP18■□□□□ 0.47
SCAMP4-202ENST00000409472 PHKA1P46020 1223 aa17.99■□□□□ 0.47
SCAMP4-202ENST00000409472 SEC31BQ9NQW1 1179 aa17.99■□□□□ 0.47
SCAMP4-202ENST00000409472 CAMTA2O94983 1202 aa17.99■□□□□ 0.47
SCAMP4-202ENST00000409472 SMIM5Q71RC9 77 aa17.99■□□□□ 0.47
SCAMP4-202ENST00000409472 MAP7D2Q96T17 732 aa17.99■□□□□ 0.47
SCAMP4-202ENST00000409472 FGD1P98174 961 aa17.98■□□□□ 0.47
SCAMP4-202ENST00000409472 PIH1D3Q9NQM4 214 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-202ENST00000409472 PDE8BO95263 885 aa17.98■□□□□ 0.47
SCAMP4-202ENST00000409472 EXOSC10Q01780 885 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-202ENST00000409472 DHX32Q7L7V1 743 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-202ENST00000409472 PTF1AQ7RTS3 328 aa17.98■□□□□ 0.47
SCAMP4-202ENST00000409472 NCOA5Q9HCD5 579 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-202ENST00000409472 THRAP3Q9Y2W1 955 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-202ENST00000409472 FOSBP53539 338 aa17.97■□□□□ 0.47
SCAMP4-202ENST00000409472 TTC6Q86TZ1 520 aa17.97■□□□□ 0.47
SCAMP4-202ENST00000409472 NKX2-3Q8TAU0 364 aa17.97■□□□□ 0.47
SCAMP4-202ENST00000409472 CDCA7Q9BWT1 371 aaPredicted RBP17.97■□□□□ 0.47
SCAMP4-202ENST00000409472 CTDNEP1O95476 244 aa17.97■□□□□ 0.47
SCAMP4-202ENST00000409472 DENND2AQ9ULE3 1009 aa17.97■□□□□ 0.47
SCAMP4-202ENST00000409472 ARAP2Q8WZ64 1704 aa17.97■□□□□ 0.47
SCAMP4-202ENST00000409472 COL5A3P25940 1745 aaPredicted RBP17.96■□□□□ 0.47
SCAMP4-202ENST00000409472 UBE2HP62256 183 aa17.96■□□□□ 0.47
SCAMP4-202ENST00000409472 CCT2P78371 535 aaKnown RBP17.96■□□□□ 0.47
SCAMP4-202ENST00000409472 CCDC102BQ68D86 513 aa17.96■□□□□ 0.47
SCAMP4-202ENST00000409472 PPP1R9BQ96SB3 815 aa17.96■□□□□ 0.47
SCAMP4-202ENST00000409472 ATP6V1DQ9Y5K8 247 aa17.96■□□□□ 0.47
SCAMP4-202ENST00000409472 GPAA1O43292 621 aa17.96■□□□□ 0.47
SCAMP4-202ENST00000409472 FAM98CQ17RN3 349 aaKnown RBP17.96■□□□□ 0.47
SCAMP4-202ENST00000409472 APPBP2Q92624 585 aa17.96■□□□□ 0.47
SCAMP4-202ENST00000409472 FGAP02671 866 aa17.95■□□□□ 0.46
SCAMP4-202ENST00000409472 CCDC173Q0VFZ6 552 aa17.95■□□□□ 0.46
SCAMP4-202ENST00000409472 ABCC12Q96J65 1359 aa17.95■□□□□ 0.46
SCAMP4-202ENST00000409472 NSUN7Q8NE18 718 aaKnown RBP17.95■□□□□ 0.46
SCAMP4-202ENST00000409472 WWC3Q9ULE0 1092 aa17.95■□□□□ 0.46
SCAMP4-202ENST00000409472 TAF1P21675 1872 aa17.95■□□□□ 0.46
SCAMP4-202ENST00000409472 CICQ96RK0 1608 aaPredicted RBP17.94■□□□□ 0.46
SCAMP4-202ENST00000409472 PFKFB2O60825 505 aa17.94■□□□□ 0.46
SCAMP4-202ENST00000409472 AGXT2Q9BYV1 514 aa17.94■□□□□ 0.46
SCAMP4-202ENST00000409472 NBPF3Q9H094 633 aa17.94■□□□□ 0.46
SCAMP4-202ENST00000409472 TFIP11Q9UBB9 837 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-202ENST00000409472 NAP1L2Q9ULW6 460 aaPredicted RBP17.94■□□□□ 0.46
SCAMP4-202ENST00000409472 NIP7Q9Y221 180 aaKnown RBP eCLIP17.94■□□□□ 0.46
SCAMP4-202ENST00000409472 IDH1O75874 414 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-202ENST00000409472 NTSR2O95665 410 aa17.94■□□□□ 0.46
SCAMP4-202ENST00000409472 FGFR2P21802 821 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms