RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 PPFIA2O75334 1257 aa15.71■□□□□ 0.1
RERE-204ENST00000400908 FBLN1P23142 703 aa15.71■□□□□ 0.1
RERE-204ENST00000400908 ZNF444Q8N0Y2 327 aaPredicted RBP15.71■□□□□ 0.1
RERE-204ENST00000400908 ACEP12821 1306 aa15.7■□□□□ 0.1
RERE-204ENST00000400908 UBA7P41226 1012 aa15.7■□□□□ 0.1
RERE-204ENST00000400908 NKIRAS1Q9NYS0 192 aa15.7■□□□□ 0.1
RERE-204ENST00000400908 PLCB3Q01970 1234 aa15.7■□□□□ 0.1
RERE-204ENST00000400908 CCDC170Q8IYT3 715 aa15.7■□□□□ 0.1
RERE-204ENST00000400908 JAKMIP2Q96AA8 810 aa15.7■□□□□ 0.1
RERE-204ENST00000400908 UBASH3AP57075 661 aa15.7■□□□□ 0.1
RERE-204ENST00000400908 NUTM1Q86Y26 1132 aa15.7■□□□□ 0.1
RERE-204ENST00000400908 MAST1Q9Y2H9 1570 aa15.7■□□□□ 0.1
RERE-204ENST00000400908 UHRF1BP1LA0JNW5 1464 aa15.7■□□□□ 0.1
RERE-204ENST00000400908 TLDC2A0PJX2 215 aa15.7■□□□□ 0.1
RERE-204ENST00000400908 GLRX3O76003 335 aaKnown RBP15.7■□□□□ 0.1
RERE-204ENST00000400908 SSFA2P28290 1259 aa15.7■□□□□ 0.1
RERE-204ENST00000400908 B4GALNT4Q76KP1 1039 aa15.7■□□□□ 0.1
RERE-204ENST00000400908 FOXO3O43524 673 aa15.69■□□□□ 0.1
RERE-204ENST00000400908 CRCPO75575 148 aa15.69■□□□□ 0.1
RERE-204ENST00000400908 CCDC82Q8N4S0 544 aa15.69■□□□□ 0.1
RERE-204ENST00000400908 DACT3Q96B18 629 aaPredicted RBP15.69■□□□□ 0.1
RERE-204ENST00000400908 RNF41Q9H4P4 317 aaPredicted RBP15.69■□□□□ 0.1
RERE-204ENST00000400908 RIMS2Q9UQ26 1411 aa15.69■□□□□ 0.1
RERE-204ENST00000400908 RANBP6O60518 1105 aaKnown RBP15.69■□□□□ 0.1
RERE-204ENST00000400908 WDR78Q5VTH9 848 aa15.69■□□□□ 0.1
RERE-204ENST00000400908 CCDC50Q8IVM0 306 aa15.69■□□□□ 0.1
RERE-204ENST00000400908 SKILP12757 684 aa15.69■□□□□ 0.1
RERE-204ENST00000400908 GJC1P36383 396 aa15.69■□□□□ 0.1
RERE-204ENST00000400908 LIMCH1Q9UPQ0 1083 aa15.69■□□□□ 0.1
RERE-204ENST00000400908 EEF2P13639 858 aaKnown RBP15.69■□□□□ 0.1
RERE-204ENST00000400908 TTF1Q15361 905 aaPredicted RBP15.69■□□□□ 0.1
RERE-204ENST00000400908 FYB2Q5VWT5 728 aa15.69■□□□□ 0.1
RERE-204ENST00000400908 MRVI1Q9Y6F6 885 aa15.69■□□□□ 0.1
RERE-204ENST00000400908 RAB11FIP3O75154 756 aa15.68■□□□□ 0.1
RERE-204ENST00000400908 VAV2P52735 878 aa15.68■□□□□ 0.1
RERE-204ENST00000400908 GKAP1Q5VSY0 366 aaPredicted RBP15.68■□□□□ 0.1
RERE-204ENST00000400908 CATIPQ7Z7H3 387 aa15.68■□□□□ 0.1
RERE-204ENST00000400908 HSPA1LP34931 641 aa15.68■□□□□ 0.1
RERE-204ENST00000400908 SPAG1Q07617 926 aa15.68■□□□□ 0.1
RERE-204ENST00000400908 NOLC1Q14978 699 aaKnown RBP eCLIP15.68■□□□□ 0.14e-8■■■■□ 23.6
RERE-204ENST00000400908 MYCNP04198 464 aaPredicted RBP15.68■□□□□ 0.1
RERE-204ENST00000400908 ATP5DP30049 168 aa15.68■□□□□ 0.1
RERE-204ENST00000400908 KRT83P78385 493 aa15.68■□□□□ 0.1
RERE-204ENST00000400908 SDCCAG8Q86SQ7 713 aaPredicted RBP15.68■□□□□ 0.1
RERE-204ENST00000400908 SEPT8Q92599 483 aa15.68■□□□□ 0.1
RERE-204ENST00000400908 GIGYF1O75420 1035 aaPredicted RBP15.68■□□□□ 0.1
RERE-204ENST00000400908 FLIIQ13045 1269 aa15.68■□□□□ 0.1
RERE-204ENST00000400908 PHLDB2Q86SQ0 1253 aa15.68■□□□□ 0.1
RERE-204ENST00000400908 CCDC94Q9BW85 323 aaPredicted RBP15.68■□□□□ 0.1
RERE-204ENST00000400908 PSMD6Q15008 389 aa15.68■□□□□ 0.1
RERE-204ENST00000400908 CLUL1Q15846 466 aa15.68■□□□□ 0.1
RERE-204ENST00000400908 CCDC38Q502W7 563 aa15.68■□□□□ 0.1
RERE-204ENST00000400908 METTL24Q5JXM2 366 aa15.68■□□□□ 0.1
RERE-204ENST00000400908 TNPO1Q92973 898 aaKnown RBP15.68■□□□□ 0.1
RERE-204ENST00000400908 ATP7AQ04656 1500 aa15.67■□□□□ 0.1
RERE-204ENST00000400908 AEBP2Q6ZN18 517 aaPredicted RBP15.67■□□□□ 0.1
RERE-204ENST00000400908 MX1P20591 662 aa15.67■□□□□ 0.1
RERE-204ENST00000400908 GEN1Q17RS7 908 aa15.67■□□□□ 0.1
RERE-204ENST00000400908 POTEDQ86YR6 584 aa15.67■□□□□ 0.1
RERE-204ENST00000400908 FAM160A1Q05DH4 1040 aa15.67■□□□□ 0.1
RERE-204ENST00000400908 ZMAT2Q96NC0 199 aaKnown RBP15.67■□□□□ 0.1
RERE-204ENST00000400908 ZNF213O14771 459 aa15.67■□□□□ 0.1
RERE-204ENST00000400908 PHACTR2O75167 634 aa15.67■□□□□ 0.1
RERE-204ENST00000400908 TUBBP07437 444 aa15.67■□□□□ 0.1
RERE-204ENST00000400908 TAF7Q15545 349 aaPredicted RBP15.67■□□□□ 0.1
RERE-204ENST00000400908 CAVIN4Q5BKX8 364 aa15.67■□□□□ 0.1
RERE-204ENST00000400908 RRAGBQ5VZM2 374 aa15.67■□□□□ 0.1
RERE-204ENST00000400908 ISM2Q6H9L7 571 aa15.67■□□□□ 0.1
RERE-204ENST00000400908 LRSAM1Q6UWE0 723 aa15.67■□□□□ 0.1
RERE-204ENST00000400908 KIF1BPQ96EK5 621 aa15.67■□□□□ 0.1
RERE-204ENST00000400908 GCC2Q8IWJ2 1684 aa15.67■□□□□ 0.1
RERE-204ENST00000400908 IFIT3O14879 490 aaKnown RBP15.66■□□□□ 0.1
RERE-204ENST00000400908 KRT86O43790 486 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 VIMP08670 466 aaKnown RBP15.66■□□□□ 0.1
RERE-204ENST00000400908 PANK2Q9BZ23 570 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 SAMM50Q9Y512 469 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 UHRF1BP1Q6BDS2 1440 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 MIER3Q7Z3K6 550 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 TRIM27P14373 513 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 ZBTB17Q13105 803 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 CALCOCO2Q13137 446 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 IFT81Q8WYA0 676 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 TTC21BQ7Z4L5 1316 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 SH2D4BQ5SQS7 431 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 CCDC25Q86WR0 208 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 TMEM110-MUSTN1A8MSY1 372 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 TERF1P54274 439 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 PPP1R7Q15435 360 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 RSPH3Q86UC2 560 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 NCAPGQ9BPX3 1015 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 VCX3AQ9NNX9 186 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 PPIP5K1Q6PFW1 1433 aa15.66■□□□□ 0.1
RERE-204ENST00000400908 SH3BGRP55822 239 aaPredicted RBP15.65■□□□□ 0.1
RERE-204ENST00000400908 UBE2HP62256 183 aa15.65■□□□□ 0.1
RERE-204ENST00000400908 ADGBQ8N7X0 1667 aa15.65■□□□□ 0.1
RERE-204ENST00000400908 ANKRD24Q8TF21 1146 aa15.65■□□□□ 0.1
RERE-204ENST00000400908 TNNC1P63316 161 aa15.65■□□□□ 0.1
RERE-204ENST00000400908 TRPC3Q13507 836 aa15.65■□□□□ 0.1
RERE-204ENST00000400908 WHAMMP3Q1A5X7 153 aa15.65■□□□□ 0.1
RERE-204ENST00000400908 TRMT1LQ7Z2T5 733 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms