RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 TTC22Q5TAA0 569 aa16.65■□□□□ 0.26
GABPA-202ENST00000400075 TTLL5Q6EMB2 1281 aa16.65■□□□□ 0.26
GABPA-202ENST00000400075 XAGE2Q96GT9 111 aa16.65■□□□□ 0.26
GABPA-202ENST00000400075 PREX2Q70Z35 1606 aa16.64■□□□□ 0.25
GABPA-202ENST00000400075 DOK7Q18PE1 504 aa16.64■□□□□ 0.25
GABPA-202ENST00000400075 BMP2KLQ5H9B9 411 aa16.64■□□□□ 0.25
GABPA-202ENST00000400075 KIAA0825Q8IV33 1275 aa16.64■□□□□ 0.25
GABPA-202ENST00000400075 BRF1Q92994 677 aa16.64■□□□□ 0.25
GABPA-202ENST00000400075 SPON1Q9HCB6 807 aa16.64■□□□□ 0.25
GABPA-202ENST00000400075 USP19O94966 1318 aa16.64■□□□□ 0.25
GABPA-202ENST00000400075 SERPINC1P01008 464 aa16.64■□□□□ 0.25
GABPA-202ENST00000400075 IDEP14735 1019 aa16.64■□□□□ 0.25
GABPA-202ENST00000400075 NAPAP54920 295 aa16.64■□□□□ 0.25
GABPA-202ENST00000400075 ZYXQ15942 572 aaKnown RBP16.64■□□□□ 0.25
GABPA-202ENST00000400075 DCAF15Q66K64 600 aa16.64■□□□□ 0.25
GABPA-202ENST00000400075 KLHDC4Q8TBB5 520 aa16.64■□□□□ 0.25
GABPA-202ENST00000400075 ERMNQ8TAM6 284 aa16.64■□□□□ 0.25
GABPA-202ENST00000400075 ZNF592Q92610 1267 aa16.64■□□□□ 0.25
GABPA-202ENST00000400075 DRC1Q96MC2 740 aa16.64■□□□□ 0.25
GABPA-202ENST00000400075 CTSWP56202 376 aa16.63■□□□□ 0.25
GABPA-202ENST00000400075 EN1Q05925 392 aaPredicted RBP16.63■□□□□ 0.25
GABPA-202ENST00000400075 KIF22Q14807 665 aa16.63■□□□□ 0.25
GABPA-202ENST00000400075 RBM27Q9P2N5 1060 aaKnown RBP16.63■□□□□ 0.25
GABPA-202ENST00000400075 RTL1A6NKG5 1358 aa16.63■□□□□ 0.25
GABPA-202ENST00000400075 CEP85Q6P2H3 762 aa16.63■□□□□ 0.25
GABPA-202ENST00000400075 RNF214Q8ND24 703 aa16.63■□□□□ 0.25
GABPA-202ENST00000400075 C6orf50Q9HD87 102 aa16.63■□□□□ 0.25
GABPA-202ENST00000400075 CAVIN1Q6NZI2 390 aaKnown RBP16.63■□□□□ 0.25
GABPA-202ENST00000400075 TMC4Q7Z404 712 aa16.63■□□□□ 0.25
GABPA-202ENST00000400075 GPHNQ9NQX3 736 aaPredicted RBP16.63■□□□□ 0.25
GABPA-202ENST00000400075 PALLDQ8WX93 1383 aa16.63■□□□□ 0.25
GABPA-202ENST00000400075 POTEJP0CG39 1038 aa16.62■□□□□ 0.25
GABPA-202ENST00000400075 CALM1P0DP23 149 aa16.62■□□□□ 0.25
GABPA-202ENST00000400075 CALM2P0DP24 149 aa16.62■□□□□ 0.25
GABPA-202ENST00000400075 CALM3P0DP25 149 aa16.62■□□□□ 0.25
GABPA-202ENST00000400075 CCDC93Q567U6 631 aa16.62■□□□□ 0.25
GABPA-202ENST00000400075 CC2D2BQ6DHV5 1058 aa16.62■□□□□ 0.25
GABPA-202ENST00000400075 TTLL6Q8N841 843 aa16.62■□□□□ 0.25
GABPA-202ENST00000400075 DEF6Q9H4E7 631 aa16.62■□□□□ 0.25
GABPA-202ENST00000400075 SEPT11Q9NVA2 429 aaKnown RBP16.62■□□□□ 0.25
GABPA-202ENST00000400075 ARAP3Q8WWN8 1544 aa16.62■□□□□ 0.25
GABPA-202ENST00000400075 HDAC1Q13547 482 aaPredicted RBP16.62■□□□□ 0.25
GABPA-202ENST00000400075 GIGYF2Q6Y7W6 1299 aaKnown RBP16.62■□□□□ 0.25
GABPA-202ENST00000400075 ZBTB38Q8NAP3 1195 aaPredicted RBP16.62■□□□□ 0.25
GABPA-202ENST00000400075 PIGBQ92521 554 aa16.62■□□□□ 0.25
GABPA-202ENST00000400075 ARHGEF6Q15052 776 aa16.62■□□□□ 0.25
GABPA-202ENST00000400075 OTUD7BQ6GQQ9 843 aa16.62■□□□□ 0.25
GABPA-202ENST00000400075 STXBP4Q6ZWJ1 553 aa16.62■□□□□ 0.25
GABPA-202ENST00000400075 PSDA5PKW4 1024 aaPredicted RBP16.62■□□□□ 0.25
GABPA-202ENST00000400075 BBOX1O75936 387 aa16.62■□□□□ 0.25
GABPA-202ENST00000400075 RRP36Q96EU6 259 aaKnown RBP16.62■□□□□ 0.25
GABPA-202ENST00000400075 DBNDD2Q9BQY9 259 aa16.62■□□□□ 0.25
GABPA-202ENST00000400075 RBM8AQ9Y5S9 174 aaKnown RBP16.61■□□□□ 0.25
GABPA-202ENST00000400075 PLXNC1O60486 1568 aa16.61■□□□□ 0.25
GABPA-202ENST00000400075 NOM1Q5C9Z4 860 aaKnown RBP16.61■□□□□ 0.25
GABPA-202ENST00000400075 SUCLG2Q96I99 432 aa16.61■□□□□ 0.25
GABPA-202ENST00000400075 CCDC150Q8NCX0 1101 aa16.61■□□□□ 0.25
GABPA-202ENST00000400075 PIM2Q9P1W9 311 aa16.61■□□□□ 0.25
GABPA-202ENST00000400075 PRDM15P57071 1507 aaPredicted RBP16.61■□□□□ 0.25
GABPA-202ENST00000400075 PCCAP05165 728 aaPredicted RBP16.61■□□□□ 0.25
GABPA-202ENST00000400075 TNNI3KQ59H18 835 aa16.61■□□□□ 0.25
GABPA-202ENST00000400075 LARP6Q9BRS8 491 aaKnown RBP16.61■□□□□ 0.25
GABPA-202ENST00000400075 AATFQ9NY61 560 aaKnown RBP eCLIP16.61■□□□□ 0.25
GABPA-202ENST00000400075 FPGT-TNNI3KV9GXZ4 949 aa16.61■□□□□ 0.25
GABPA-202ENST00000400075 NEURL1BA8MQ27 555 aa16.6■□□□□ 0.25
GABPA-202ENST00000400075 PPFIA3O75145 1194 aa16.6■□□□□ 0.25
GABPA-202ENST00000400075 MAP3K9P80192 1104 aa16.6■□□□□ 0.25
GABPA-202ENST00000400075 TSG101Q99816 390 aa16.6■□□□□ 0.25
GABPA-202ENST00000400075 USP40Q9NVE5 1235 aa16.6■□□□□ 0.25
GABPA-202ENST00000400075 PPEF1O14829 653 aaPredicted RBP16.6■□□□□ 0.25
GABPA-202ENST00000400075 NEBLO76041 1014 aa16.6■□□□□ 0.25
GABPA-202ENST00000400075 SDSP20132 328 aa16.6■□□□□ 0.25
GABPA-202ENST00000400075 NCBP1Q09161 790 aaKnown RBP16.6■□□□□ 0.25
GABPA-202ENST00000400075 PPFIBP1Q86W92 1011 aa16.6■□□□□ 0.25
GABPA-202ENST00000400075 DEKP35659 375 aaKnown RBP16.6■□□□□ 0.25
GABPA-202ENST00000400075 LRRC2Q9BYS8 371 aa16.6■□□□□ 0.25
GABPA-202ENST00000400075 CCDC192P0DO97 292 aa16.59■□□□□ 0.25
GABPA-202ENST00000400075 TXNRD1Q16881 649 aa16.59■□□□□ 0.25
GABPA-202ENST00000400075 AMPD3Q01432 767 aa16.59■□□□□ 0.25
GABPA-202ENST00000400075 NMIQ13287 307 aaPredicted RBP16.59■□□□□ 0.25
GABPA-202ENST00000400075 BACH2Q9BYV9 841 aa16.59■□□□□ 0.25
GABPA-202ENST00000400075 TBC1D9Q6ZT07 1266 aa16.59■□□□□ 0.25
GABPA-202ENST00000400075 SCAND2PQ9GZW5 306 aaPredicted RBP16.59■□□□□ 0.25
GABPA-202ENST00000400075 TRIM35Q9UPQ4 493 aa16.59■□□□□ 0.25
GABPA-202ENST00000400075 IGSF1Q8N6C5 1336 aa16.59■□□□□ 0.25
GABPA-202ENST00000400075 RPS6KA4O75676 772 aa16.59■□□□□ 0.25
GABPA-202ENST00000400075 DCTPP1Q9H773 170 aa16.59■□□□□ 0.25
GABPA-202ENST00000400075 PRC1O43663 620 aa16.58■□□□□ 0.25
GABPA-202ENST00000400075 AATKQ6ZMQ8 1374 aa16.58■□□□□ 0.25
GABPA-202ENST00000400075 BACH1O14867 736 aa16.58■□□□□ 0.24
GABPA-202ENST00000400075 SYCP3Q8IZU3 236 aa16.58■□□□□ 0.24
GABPA-202ENST00000400075 KIF24Q5T7B8 1368 aa16.58■□□□□ 0.24
GABPA-202ENST00000400075 BICD1Q96G01 975 aa16.58■□□□□ 0.24
GABPA-202ENST00000400075 NUCB1Q02818 461 aa16.57■□□□□ 0.24
GABPA-202ENST00000400075 MAPKAPK5Q8IW41 473 aa16.57■□□□□ 0.24
GABPA-202ENST00000400075 CPXCR1Q8N123 301 aa16.57■□□□□ 0.24
GABPA-202ENST00000400075 TCEANC2Q96MN5 208 aa16.57■□□□□ 0.24
GABPA-202ENST00000400075 TCHPQ9BT92 498 aa16.57■□□□□ 0.24
GABPA-202ENST00000400075 SRP68Q9UHB9 627 aaKnown RBP16.57■□□□□ 0.24
GABPA-202ENST00000400075 ADGBQ8N7X0 1667 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms