RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 CHST3Q7LGC8 479 aa18.25■□□□□ 0.51
ITSN1-209ENST00000399352 SYNCQ9H7C4 482 aa18.25■□□□□ 0.51
ITSN1-209ENST00000399352 TUBBP07437 444 aa18.25■□□□□ 0.51
ITSN1-209ENST00000399352 VIMP08670 466 aaKnown RBP18.25■□□□□ 0.51
ITSN1-209ENST00000399352 EHMT1Q9H9B1 1298 aa18.25■□□□□ 0.51
ITSN1-209ENST00000399352 ZNF652Q9Y2D9 606 aa18.25■□□□□ 0.51
ITSN1-209ENST00000399352 INPP5BP32019 993 aa18.25■□□□□ 0.51
ITSN1-209ENST00000399352 CLNS1AP54105 237 aaKnown RBP18.25■□□□□ 0.51
ITSN1-209ENST00000399352 PPARDQ03181 441 aa18.25■□□□□ 0.51
ITSN1-209ENST00000399352 ANKRD44Q8N8A2 993 aa18.25■□□□□ 0.51
ITSN1-209ENST00000399352 BICD1Q96G01 975 aa18.25■□□□□ 0.51
ITSN1-209ENST00000399352 LUC7L2Q9Y383 392 aaKnown RBP18.25■□□□□ 0.51
ITSN1-209ENST00000399352 CARD6Q9BX69 1037 aa18.24■□□□□ 0.51
ITSN1-209ENST00000399352 EEF2P13639 858 aaKnown RBP18.24■□□□□ 0.51
ITSN1-209ENST00000399352 PIK3R4Q99570 1358 aa18.24■□□□□ 0.51
ITSN1-209ENST00000399352 AMOTQ4VCS5 1084 aa18.24■□□□□ 0.51
ITSN1-209ENST00000399352 KCNH5Q8NCM2 988 aa18.24■□□□□ 0.51
ITSN1-209ENST00000399352 MYRIPQ8NFW9 859 aa18.24■□□□□ 0.51
ITSN1-209ENST00000399352 TRIM75PA6NK02 468 aa18.24■□□□□ 0.51
ITSN1-209ENST00000399352 TNNC1P63316 161 aa18.24■□□□□ 0.51
ITSN1-209ENST00000399352 CCDC50Q8IVM0 306 aa18.24■□□□□ 0.51
ITSN1-209ENST00000399352 PCK1P35558 622 aa18.23■□□□□ 0.51
ITSN1-209ENST00000399352 NMIQ13287 307 aaPredicted RBP18.23■□□□□ 0.51
ITSN1-209ENST00000399352 PPP1R12CQ9BZL4 782 aa18.23■□□□□ 0.51
ITSN1-209ENST00000399352 INTS8Q75QN2 995 aaKnown RBP18.23■□□□□ 0.51
ITSN1-209ENST00000399352 B4GALNT4Q76KP1 1039 aa18.23■□□□□ 0.51
ITSN1-209ENST00000399352 NEK11Q8NG66 645 aa18.23■□□□□ 0.51
ITSN1-209ENST00000399352 MCMDC2Q4G0Z9 681 aa18.23■□□□□ 0.51
ITSN1-209ENST00000399352 THEMISQ8N1K5 641 aaPredicted RBP18.23■□□□□ 0.51
ITSN1-209ENST00000399352 SBNO2Q9Y2G9 1366 aa18.23■□□□□ 0.51
ITSN1-209ENST00000399352 WDHD1O75717 1129 aaPredicted RBP18.23■□□□□ 0.51
ITSN1-209ENST00000399352 MTRF1LQ9UGC7 380 aaKnown RBP18.23■□□□□ 0.51
ITSN1-209ENST00000399352 A0A1B0GVL5 298 aa18.22■□□□□ 0.51
ITSN1-209ENST00000399352 GABPB1Q06547 395 aaPredicted RBP18.22■□□□□ 0.51
ITSN1-209ENST00000399352 APOBRQ0VD83 1088 aa18.22■□□□□ 0.51
ITSN1-209ENST00000399352 HEATR3Q7Z4Q2 680 aa18.22■□□□□ 0.51
ITSN1-209ENST00000399352 WDR66Q8TBY9 1149 aa18.22■□□□□ 0.51
ITSN1-209ENST00000399352 ANAPC4Q9UJX5 808 aa18.22■□□□□ 0.51
ITSN1-209ENST00000399352 SYNJ2O15056 1496 aa18.22■□□□□ 0.51
ITSN1-209ENST00000399352 IFIT1BQ5T764 474 aaKnown RBP18.22■□□□□ 0.51
ITSN1-209ENST00000399352 WDR78Q5VTH9 848 aa18.22■□□□□ 0.51
ITSN1-209ENST00000399352 RAB3IL1Q8TBN0 382 aa18.22■□□□□ 0.51
ITSN1-209ENST00000399352 ARHGAP45Q92619 1136 aa18.22■□□□□ 0.51
ITSN1-209ENST00000399352 STMN2Q93045 179 aa18.22■□□□□ 0.51
ITSN1-209ENST00000399352 AKR1B15C9JRZ8 316 aaPredicted RBP18.22■□□□□ 0.51
ITSN1-209ENST00000399352 NOL3O60936 208 aaKnown RBP18.22■□□□□ 0.51
ITSN1-209ENST00000399352 ANKRD24Q8TF21 1146 aa18.22■□□□□ 0.51
ITSN1-209ENST00000399352 HGSO14964 777 aaPredicted RBP18.22■□□□□ 0.51
ITSN1-209ENST00000399352 OSCARQ8IYS5 282 aa18.22■□□□□ 0.51
ITSN1-209ENST00000399352 TIAM1Q13009 1591 aa18.22■□□□□ 0.51
ITSN1-209ENST00000399352 NCAPD3P42695 1498 aa18.21■□□□□ 0.51
ITSN1-209ENST00000399352 MYL5Q02045 173 aa18.21■□□□□ 0.51
ITSN1-209ENST00000399352 KRT23Q9C075 422 aa18.21■□□□□ 0.51
ITSN1-209ENST00000399352 PTPDC1A2A3K4 754 aa18.21■□□□□ 0.51
ITSN1-209ENST00000399352 CCT6AP40227 531 aaKnown RBP18.21■□□□□ 0.51
ITSN1-209ENST00000399352 CNGA4Q8IV77 575 aa18.21■□□□□ 0.51
ITSN1-209ENST00000399352 CWC25Q9NXE8 425 aaPredicted RBP18.21■□□□□ 0.51
ITSN1-209ENST00000399352 MAP3K9P80192 1104 aa18.21■□□□□ 0.51
ITSN1-209ENST00000399352 ERMNQ8TAM6 284 aa18.21■□□□□ 0.51
ITSN1-209ENST00000399352 IL16Q14005 1332 aa18.21■□□□□ 0.51
ITSN1-209ENST00000399352 PPP1R7Q15435 360 aa18.21■□□□□ 0.51
ITSN1-209ENST00000399352 MAP7D1Q3KQU3 841 aa18.21■□□□□ 0.51
ITSN1-209ENST00000399352 GOLGA6CA6NDK9 693 aa18.2■□□□□ 0.5
ITSN1-209ENST00000399352 GOLGA6DP0CG33 693 aa18.2■□□□□ 0.5
ITSN1-209ENST00000399352 SARNPP82979 210 aaKnown RBP18.2■□□□□ 0.5
ITSN1-209ENST00000399352 MIPOL1Q8TD10 442 aa18.2■□□□□ 0.5
ITSN1-209ENST00000399352 GOLGA6AQ9NYA3 693 aa18.2■□□□□ 0.5
ITSN1-209ENST00000399352 BUB1BO60566 1050 aaPredicted RBP18.2■□□□□ 0.5
ITSN1-209ENST00000399352 ATP11AP98196 1134 aa18.2■□□□□ 0.5
ITSN1-209ENST00000399352 FEZ2Q9UHY8 353 aaPredicted RBP18.2■□□□□ 0.5
ITSN1-209ENST00000399352 ZFYP08048 801 aaPredicted RBP18.2■□□□□ 0.5
ITSN1-209ENST00000399352 TPD52P55327 224 aaPredicted RBP18.2■□□□□ 0.5
ITSN1-209ENST00000399352 SF3B2Q13435 895 aaKnown RBP18.2■□□□□ 0.5
ITSN1-209ENST00000399352 ATP6V0A2Q9Y487 856 aa18.2■□□□□ 0.5
ITSN1-209ENST00000399352 TSC1Q92574 1164 aa18.2■□□□□ 0.5
ITSN1-209ENST00000399352 INTS4Q96HW7 963 aaKnown RBP18.2■□□□□ 0.5
ITSN1-209ENST00000399352 CALCOCO2Q13137 446 aa18.19■□□□□ 0.5
ITSN1-209ENST00000399352 PLIN2Q99541 437 aa18.19■□□□□ 0.5
ITSN1-209ENST00000399352 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.19■□□□□ 0.56e-6■■■□□ 14.8
ITSN1-209ENST00000399352 CPA1P15085 419 aa18.19■□□□□ 0.5
ITSN1-209ENST00000399352 RNASE9P60153 205 aaKnown RBP18.19■□□□□ 0.5
ITSN1-209ENST00000399352 NAPGQ99747 312 aaPredicted RBP18.19■□□□□ 0.5
ITSN1-209ENST00000399352 PHF23Q9BUL5 403 aaPredicted RBP18.19■□□□□ 0.5
ITSN1-209ENST00000399352 ZPR1O75312 459 aa18.19■□□□□ 0.5
ITSN1-209ENST00000399352 RLBP1P12271 317 aa18.19■□□□□ 0.5
ITSN1-209ENST00000399352 ESR2Q92731 530 aa18.19■□□□□ 0.5
ITSN1-209ENST00000399352 PPM1FP49593 454 aaPredicted RBP18.19■□□□□ 0.5
ITSN1-209ENST00000399352 NKIRAS1Q9NYS0 192 aa18.19■□□□□ 0.5
ITSN1-209ENST00000399352 CREB3L3Q68CJ9 461 aa18.18■□□□□ 0.5
ITSN1-209ENST00000399352 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
ITSN1-209ENST00000399352 SLC4A4Q9Y6R1 1079 aa18.18■□□□□ 0.5
ITSN1-209ENST00000399352 TMTC2Q8N394 836 aa18.18■□□□□ 0.5
ITSN1-209ENST00000399352 IFT74Q96LB3 600 aa18.18■□□□□ 0.5
ITSN1-209ENST00000399352 PABPN1LA6NDY0 278 aaKnown RBP18.18■□□□□ 0.5
ITSN1-209ENST00000399352 OAS2P29728 719 aaKnown RBP18.18■□□□□ 0.5
ITSN1-209ENST00000399352 SF3A3Q12874 501 aaKnown RBP eCLIP18.18■□□□□ 0.52e-7■■■■■ 27.2
ITSN1-209ENST00000399352 PNMA8AQ86V59 439 aaPredicted RBP18.18■□□□□ 0.5
ITSN1-209ENST00000399352 LMNTD2Q8IXW0 634 aa18.18■□□□□ 0.5
ITSN1-209ENST00000399352 BICDL2A1A5D9 508 aa18.17■□□□□ 0.5
ITSN1-209ENST00000399352 ATP8B2P98198 1209 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms