RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 PI16Q6UXB8 463 aa27.9■■■□□ 2.06
CDH23-206ENST00000398842 CELF1Q92879 486 aaKnown RBP27.9■■■□□ 2.06
CDH23-206ENST00000398842 RNF113AO15541 343 aaKnown RBP27.89■■■□□ 2.06
CDH23-206ENST00000398842 DDIT3P35638 169 aa27.89■■■□□ 2.06
CDH23-206ENST00000398842 SF3B2Q13435 895 aaKnown RBP27.88■■■□□ 2.05
CDH23-206ENST00000398842 PRPF40BQ6NWY9 871 aaKnown RBP27.88■■■□□ 2.05
CDH23-206ENST00000398842 RGPD3A6NKT7 1758 aaPredicted RBP27.88■■■□□ 2.05
CDH23-206ENST00000398842 RGPD4Q7Z3J3 1758 aa27.88■■■□□ 2.05
CDH23-206ENST00000398842 TM4SF1P30408 202 aa27.88■■■□□ 2.05
CDH23-206ENST00000398842 LRRFIP1Q32MZ4 808 aaKnown RBP27.87■■■□□ 2.05
CDH23-206ENST00000398842 SLFNL1Q499Z3 407 aa27.87■■■□□ 2.05
CDH23-206ENST00000398842 CREB3L3Q68CJ9 461 aa27.87■■■□□ 2.05
CDH23-206ENST00000398842 CCDC129Q6ZRS4 1044 aa27.87■■■□□ 2.05
CDH23-206ENST00000398842 CNBD1Q8NA66 436 aa27.87■■■□□ 2.05
CDH23-206ENST00000398842 AKT1S1Q96B36 256 aa27.87■■■□□ 2.05
CDH23-206ENST00000398842 MCM2P49736 904 aa27.86■■■□□ 2.05
CDH23-206ENST00000398842 RPS8P62241 208 aaKnown RBP27.86■■■□□ 2.05
CDH23-206ENST00000398842 EZH2Q15910 746 aaKnown RBP27.86■■■□□ 2.05
CDH23-206ENST00000398842 UPF3BQ9BZI7 483 aaKnown RBP27.86■■■□□ 2.05
CDH23-206ENST00000398842 MINPP1Q9UNW1 487 aa27.86■■■□□ 2.05
CDH23-206ENST00000398842 ZFYP08048 801 aaPredicted RBP27.86■■■□□ 2.05
CDH23-206ENST00000398842 ZNF827Q17R98 1081 aa27.86■■■□□ 2.05
CDH23-206ENST00000398842 MYO5AQ9Y4I1 1855 aaKnown RBP27.85■■■□□ 2.05
CDH23-206ENST00000398842 NPHP1O15259 732 aa27.85■■■□□ 2.05
CDH23-206ENST00000398842 CYP2E1P05181 493 aaPredicted RBP27.85■■■□□ 2.05
CDH23-206ENST00000398842 KCNJ4P48050 445 aa27.85■■■□□ 2.05
CDH23-206ENST00000398842 PRR5LQ6MZQ0 368 aa27.85■■■□□ 2.05
CDH23-206ENST00000398842 DEFB132Q7Z7B7 95 aa27.85■■■□□ 2.05
CDH23-206ENST00000398842 SLC27A2O14975 620 aa27.84■■■□□ 2.05
CDH23-206ENST00000398842 TTF1Q15361 905 aaPredicted RBP27.84■■■□□ 2.05
CDH23-206ENST00000398842 CHMP5Q9NZZ3 219 aa27.84■■■□□ 2.05
CDH23-206ENST00000398842 MAST3O60307 1309 aa27.83■■■□□ 2.05
CDH23-206ENST00000398842 CAMKK2Q96RR4 588 aa27.83■■■□□ 2.05
CDH23-206ENST00000398842 TM6SF1Q9BZW5 370 aa27.83■■■□□ 2.05
CDH23-206ENST00000398842 HMG20BQ9P0W2 317 aa27.83■■■□□ 2.05
CDH23-206ENST00000398842 HSP90AA1P07900 732 aaKnown RBP27.83■■■□□ 2.05
CDH23-206ENST00000398842 ZKSCAN1P17029 563 aaPredicted RBP27.83■■■□□ 2.05
CDH23-206ENST00000398842 UBE4AQ14139 1066 aa27.83■■■□□ 2.05
CDH23-206ENST00000398842 DOCK2Q92608 1830 aa27.82■■■□□ 2.04
CDH23-206ENST00000398842 SERPINB2P05120 415 aa27.82■■■□□ 2.04
CDH23-206ENST00000398842 NBR1Q14596 966 aa27.82■■■□□ 2.04
CDH23-206ENST00000398842 TTC14Q96N46 770 aa27.82■■■□□ 2.04
CDH23-206ENST00000398842 BAG6P46379 1132 aa27.81■■■□□ 2.04
CDH23-206ENST00000398842 ADCK5Q3MIX3 580 aa27.81■■■□□ 2.04
CDH23-206ENST00000398842 RNF20Q5VTR2 975 aa27.81■■■□□ 2.04
CDH23-206ENST00000398842 OSBP2Q969R2 916 aa27.81■■■□□ 2.04
CDH23-206ENST00000398842 PIH1D3Q9NQM4 214 aaKnown RBP27.81■■■□□ 2.04
CDH23-206ENST00000398842 TFCP2L1Q9NZI6 479 aa27.81■■■□□ 2.04
CDH23-206ENST00000398842 BCAMP50895 628 aa27.81■■■□□ 2.04
CDH23-206ENST00000398842 RASGRF1Q13972 1273 aa27.81■■■□□ 2.04
CDH23-206ENST00000398842 TSGA10IPQ3SY00 556 aa27.81■■■□□ 2.04
CDH23-206ENST00000398842 SPATA5Q8NB90 893 aa27.81■■■□□ 2.04
CDH23-206ENST00000398842 U3KPZ7 1027 aaPredicted RBP27.81■■■□□ 2.04
CDH23-206ENST00000398842 M0R2C6 588 aa27.8■■■□□ 2.04
CDH23-206ENST00000398842 DDR1Q08345 913 aa27.8■■■□□ 2.04
CDH23-206ENST00000398842 DSCC1Q9BVC3 393 aa27.8■■■□□ 2.04
CDH23-206ENST00000398842 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.8■■■□□ 2.04
CDH23-206ENST00000398842 ZSWIM6Q9HCJ5 1215 aa27.8■■■□□ 2.04
CDH23-206ENST00000398842 CIZ1Q9ULV3 898 aaPredicted RBP27.8■■■□□ 2.04
CDH23-206ENST00000398842 RPAP1Q9BWH6 1393 aaPredicted RBP27.8■■■□□ 2.04
CDH23-206ENST00000398842 APPBP2Q92624 585 aa27.79■■■□□ 2.04
CDH23-206ENST00000398842 JAKMIP1Q96N16 626 aaKnown RBP27.79■■■□□ 2.04
CDH23-206ENST00000398842 FOXD4L1Q9NU39 408 aa27.79■■■□□ 2.04
CDH23-206ENST00000398842 ZNF804BA4D1E1 1349 aa27.79■■■□□ 2.04
CDH23-206ENST00000398842 POLRMTO00411 1230 aaKnown RBP27.78■■■□□ 2.04
CDH23-206ENST00000398842 CASTP20810 708 aaKnown RBP27.78■■■□□ 2.04
CDH23-206ENST00000398842 NFKBIBQ15653 356 aa27.78■■■□□ 2.04
CDH23-206ENST00000398842 ZSCAN25Q6NSZ9 544 aa27.78■■■□□ 2.04
CDH23-206ENST00000398842 TMX3Q96JJ7 454 aa27.78■■■□□ 2.04
CDH23-206ENST00000398842 ADD2P35612 726 aa27.78■■■□□ 2.04
CDH23-206ENST00000398842 COL23A1Q86Y22 540 aaPredicted RBP27.78■■■□□ 2.04
CDH23-206ENST00000398842 WTIPA6NIX2 430 aaPredicted RBP27.77■■■□□ 2.04
CDH23-206ENST00000398842 ST5P78524 1137 aa27.77■■■□□ 2.04
CDH23-206ENST00000398842 VPS53Q5VIR6 699 aa27.77■■■□□ 2.04
CDH23-206ENST00000398842 ANKRD2Q9GZV1 360 aa27.77■■■□□ 2.04
CDH23-206ENST00000398842 GRAPQ13588 217 aa27.76■■■□□ 2.03
CDH23-206ENST00000398842 WASHC4Q2M389 1173 aa27.76■■■□□ 2.03
CDH23-206ENST00000398842 CRY2Q49AN0 593 aa27.76■■■□□ 2.03
CDH23-206ENST00000398842 GRAPLQ8TC17 118 aaPredicted RBP27.76■■■□□ 2.03
CDH23-206ENST00000398842 TAF6LQ9Y6J9 622 aa27.76■■■□□ 2.03
CDH23-206ENST00000398842 HSPD1P10809 573 aaKnown RBP27.76■■■□□ 2.03
CDH23-206ENST00000398842 FLAD1Q8NFF5 587 aa27.76■■■□□ 2.03
CDH23-206ENST00000398842 CPA1P15085 419 aa27.75■■■□□ 2.03
CDH23-206ENST00000398842 CUL4AQ13619 759 aa27.75■■■□□ 2.03
CDH23-206ENST00000398842 UBE3CQ15386 1083 aa27.75■■■□□ 2.03
CDH23-206ENST00000398842 RUFY3Q7L099 469 aa27.75■■■□□ 2.03
CDH23-206ENST00000398842 CYP46A1Q9Y6A2 500 aa27.75■■■□□ 2.03
CDH23-206ENST00000398842 PSMA5P28066 241 aa27.74■■■□□ 2.03
CDH23-206ENST00000398842 SLC9C2Q5TAH2 1124 aa27.74■■■□□ 2.03
CDH23-206ENST00000398842 PUS7LQ9H0K6 701 aaKnown RBP27.74■■■□□ 2.03
CDH23-206ENST00000398842 NRXN2Q9P2S2 1712 aa27.74■■■□□ 2.03
CDH23-206ENST00000398842 IDH1O75874 414 aaKnown RBP27.73■■■□□ 2.03
CDH23-206ENST00000398842 GYG1P46976 350 aa27.73■■■□□ 2.03
CDH23-206ENST00000398842 AK2P54819 239 aa27.73■■■□□ 2.03
CDH23-206ENST00000398842 CCDC125Q86Z20 511 aa27.73■■■□□ 2.03
CDH23-206ENST00000398842 NLGN1Q8N2Q7 840 aa27.73■■■□□ 2.03
CDH23-206ENST00000398842 TCRBV5S4A2TA0A5A2 114 aa27.72■■■□□ 2.03
CDH23-206ENST00000398842 CYP21A2P08686 494 aa27.72■■■□□ 2.03
CDH23-206ENST00000398842 PDE6AP16499 860 aa27.72■■■□□ 2.03
CDH23-206ENST00000398842 KRT32Q14532 448 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms