RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 ZSWIM6Q9HCJ5 1215 aa17.41■□□□□ 0.38
CYLD-202ENST00000398568 IFNKQ9P0W0 207 aa17.41■□□□□ 0.38
CYLD-202ENST00000398568 H3BQV1 296 aa17.41■□□□□ 0.38
CYLD-202ENST00000398568 ZSCAN12O43309 604 aa17.41■□□□□ 0.38
CYLD-202ENST00000398568 ATP8B2P98198 1209 aa17.41■□□□□ 0.38
CYLD-202ENST00000398568 IFFO2Q5TF58 517 aa17.41■□□□□ 0.38
CYLD-202ENST00000398568 CCAR1Q8IX12 1150 aaKnown RBP17.41■□□□□ 0.38
CYLD-202ENST00000398568 GOLGA1Q92805 767 aa17.41■□□□□ 0.38
CYLD-202ENST00000398568 MICALL1Q8N3F8 863 aa17.4■□□□□ 0.38
CYLD-202ENST00000398568 CEP89Q96ST8 783 aa17.4■□□□□ 0.38
CYLD-202ENST00000398568 XPO4Q9C0E2 1151 aaKnown RBP17.4■□□□□ 0.38
CYLD-202ENST00000398568 RPS6KA5O75582 802 aa17.4■□□□□ 0.38
CYLD-202ENST00000398568 CEBPZQ03701 1054 aaKnown RBP17.4■□□□□ 0.38
CYLD-202ENST00000398568 BRD3Q15059 726 aa17.4■□□□□ 0.38
CYLD-202ENST00000398568 MPHOSPH8Q99549 860 aa17.4■□□□□ 0.38
CYLD-202ENST00000398568 PDE11AQ9HCR9 933 aa17.4■□□□□ 0.38
CYLD-202ENST00000398568 KIF1CO43896 1103 aaKnown RBP17.39■□□□□ 0.38
CYLD-202ENST00000398568 RRS1Q15050 365 aaKnown RBP17.39■□□□□ 0.38
CYLD-202ENST00000398568 ADCK5Q3MIX3 580 aa17.39■□□□□ 0.38
CYLD-202ENST00000398568 NBPF11Q86T75 865 aa17.39■□□□□ 0.38
CYLD-202ENST00000398568 TPCN1Q9ULQ1 816 aa17.39■□□□□ 0.38
CYLD-202ENST00000398568 PNMA6EA0A0J9YXQ4 647 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 CCDC151A5D8V7 595 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 ANKRD65E5RJM6 399 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 RAB11FIP3O75154 756 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 APOBRQ0VD83 1088 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 ST3GAL1Q11201 340 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 CHRNA2Q15822 529 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 FOXR1Q6PIV2 292 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 BCCIPQ9P287 314 aaKnown RBP eCLIP17.39■□□□□ 0.37
CYLD-202ENST00000398568 USP8P40818 1118 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 TDO2P48775 406 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 MNAT1P51948 309 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 TSGA10IPQ3SY00 556 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 HDXQ7Z353 690 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 FAM107BQ9H098 131 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 PARP3Q9Y6F1 533 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 DCCP43146 1447 aa17.39■□□□□ 0.37
CYLD-202ENST00000398568 CPSF1Q10570 1443 aaKnown RBP17.39■□□□□ 0.37
CYLD-202ENST00000398568 PSMA5P28066 241 aa17.38■□□□□ 0.37
CYLD-202ENST00000398568 ZSCAN16Q9H4T2 348 aaPredicted RBP17.38■□□□□ 0.37
CYLD-202ENST00000398568 FMN2Q9NZ56 1722 aa17.38■□□□□ 0.37
CYLD-202ENST00000398568 ERLIN1O75477 346 aa17.38■□□□□ 0.37
CYLD-202ENST00000398568 ANKRD1Q15327 319 aa17.38■□□□□ 0.37
CYLD-202ENST00000398568 A0A087WWV3 80 aa17.38■□□□□ 0.37
CYLD-202ENST00000398568 CCDC30Q5VVM6 783 aa17.38■□□□□ 0.37
CYLD-202ENST00000398568 A0A087WUV0 522 aaPredicted RBP17.37■□□□□ 0.37
CYLD-202ENST00000398568 GNG11P61952 73 aa17.37■□□□□ 0.37
CYLD-202ENST00000398568 SUFUQ9UMX1 484 aa17.37■□□□□ 0.37
CYLD-202ENST00000398568 ANKARQ7Z5J8 1434 aa17.37■□□□□ 0.37
CYLD-202ENST00000398568 ROBO1Q9Y6N7 1651 aa17.37■□□□□ 0.37
CYLD-202ENST00000398568 TRIM65Q6PJ69 517 aa17.37■□□□□ 0.37
CYLD-202ENST00000398568 TADA2BQ86TJ2 420 aa17.37■□□□□ 0.37
CYLD-202ENST00000398568 LTV1Q96GA3 475 aaPredicted RBP17.37■□□□□ 0.37
CYLD-202ENST00000398568 SDF4Q9BRK5 362 aa17.37■□□□□ 0.37
CYLD-202ENST00000398568 DNAJC21Q5F1R6 531 aaKnown RBP17.37■□□□□ 0.37
CYLD-202ENST00000398568 COG3Q96JB2 828 aa17.37■□□□□ 0.37
CYLD-202ENST00000398568 FMNL2Q96PY5 1086 aa17.37■□□□□ 0.37
CYLD-202ENST00000398568 CD163L1Q9NR16 1453 aa17.37■□□□□ 0.37
CYLD-202ENST00000398568 TXLNAP40222 546 aa17.36■□□□□ 0.37
CYLD-202ENST00000398568 CCDC102AQ96A19 550 aa17.36■□□□□ 0.37
CYLD-202ENST00000398568 LRRC59Q96AG4 307 aaKnown RBP17.36■□□□□ 0.37
CYLD-202ENST00000398568 FAN1Q9Y2M0 1017 aa17.36■□□□□ 0.37
CYLD-202ENST00000398568 GIGYF1O75420 1035 aaPredicted RBP17.36■□□□□ 0.37
CYLD-202ENST00000398568 GSCP56915 257 aaPredicted RBP17.36■□□□□ 0.37
CYLD-202ENST00000398568 UTP14AQ9BVJ6 771 aaKnown RBP17.36■□□□□ 0.37
CYLD-202ENST00000398568 ACBD3Q9H3P7 528 aa17.36■□□□□ 0.37
CYLD-202ENST00000398568 USP6P35125 1406 aa17.36■□□□□ 0.37
CYLD-202ENST00000398568 STK3Q13188 491 aa17.35■□□□□ 0.37
CYLD-202ENST00000398568 ILDR1Q86SU0 546 aaPredicted RBP17.35■□□□□ 0.37
CYLD-202ENST00000398568 CCDC196A0A1B0GTZ2 297 aa17.35■□□□□ 0.37
CYLD-202ENST00000398568 CPP00450 1065 aa17.35■□□□□ 0.37
CYLD-202ENST00000398568 MAP2K7O14733 419 aa17.35■□□□□ 0.37
CYLD-202ENST00000398568 EIF5P55010 431 aaKnown RBP17.35■□□□□ 0.37
CYLD-202ENST00000398568 PATL2C9JE40 543 aaKnown RBP17.34■□□□□ 0.37
CYLD-202ENST00000398568 SURF6O75683 361 aaKnown RBP17.34■□□□□ 0.37
CYLD-202ENST00000398568 SETQ01105 290 aaPredicted RBP17.34■□□□□ 0.37
CYLD-202ENST00000398568 TTLL5Q6EMB2 1281 aa17.34■□□□□ 0.37
CYLD-202ENST00000398568 GOLGA6L9A6NEM1 432 aa17.34■□□□□ 0.37
CYLD-202ENST00000398568 BLOC1S2Q6QNY1 142 aa17.34■□□□□ 0.37
CYLD-202ENST00000398568 RSRC2Q7L4I2 434 aaKnown RBP17.34■□□□□ 0.37
CYLD-202ENST00000398568 POTEB2H3BUK9 544 aa17.34■□□□□ 0.37
CYLD-202ENST00000398568 MAP3K9P80192 1104 aa17.34■□□□□ 0.37
CYLD-202ENST00000398568 PTH1RQ03431 593 aa17.34■□□□□ 0.37
CYLD-202ENST00000398568 MED4Q9NPJ6 270 aa17.33■□□□□ 0.37
CYLD-202ENST00000398568 KCNG1Q9UIX4 513 aa17.33■□□□□ 0.37
CYLD-202ENST00000398568 SPATA31A3Q5VYP0 1347 aa17.33■□□□□ 0.36
CYLD-202ENST00000398568 PPFIA4O75335 1185 aa17.33■□□□□ 0.36
CYLD-202ENST00000398568 SATB1Q01826 763 aa17.33■□□□□ 0.36
CYLD-202ENST00000398568 LRRC31Q6UY01 552 aa17.33■□□□□ 0.36
CYLD-202ENST00000398568 G2E3Q7L622 706 aa17.33■□□□□ 0.36
CYLD-202ENST00000398568 FBXO41Q8TF61 875 aa17.33■□□□□ 0.36
CYLD-202ENST00000398568 STK31Q9BXU1 1019 aa17.33■□□□□ 0.36
CYLD-202ENST00000398568 CDK12Q9NYV4 1490 aaPredicted RBP17.33■□□□□ 0.36
CYLD-202ENST00000398568 ERLIN2O94905 339 aa17.33■□□□□ 0.36
CYLD-202ENST00000398568 IL13P35225 146 aa17.33■□□□□ 0.36
CYLD-202ENST00000398568 CNPY4Q8N129 248 aa17.33■□□□□ 0.36
CYLD-202ENST00000398568 FSIP1Q8NA03 581 aa17.33■□□□□ 0.36
CYLD-202ENST00000398568 CNNM3Q8NE01 707 aa17.33■□□□□ 0.36
CYLD-202ENST00000398568 ZSWIM4Q9H7M6 989 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms