RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 FAM161AQ3B820 660 aa31.86■■■□□ 2.69
U2AF1-203ENST00000398137 IFFO2Q5TF58 517 aa31.86■■■□□ 2.69
U2AF1-203ENST00000398137 KAZALD1Q96I82 304 aa31.86■■■□□ 2.69
U2AF1-203ENST00000398137 ZNF646O15015 1829 aaPredicted RBP31.85■■■□□ 2.69
U2AF1-203ENST00000398137 RASSF10A6NK89 507 aa31.85■■■□□ 2.69
U2AF1-203ENST00000398137 MVPQ14764 893 aaKnown RBP31.85■■■□□ 2.69
U2AF1-203ENST00000398137 GNAI3P08754 354 aa31.84■■■□□ 2.69
U2AF1-203ENST00000398137 VIL1P09327 827 aaKnown RBP31.84■■■□□ 2.69
U2AF1-203ENST00000398137 ATP2B4P23634 1241 aa31.84■■■□□ 2.69
U2AF1-203ENST00000398137 SAMD7Q7Z3H4 446 aa31.84■■■□□ 2.69
U2AF1-203ENST00000398137 BICC1Q9H694 974 aaKnown RBP31.84■■■□□ 2.69
U2AF1-203ENST00000398137 SUPT16HQ9Y5B9 1047 aaKnown RBP31.84■■■□□ 2.69
U2AF1-203ENST00000398137 ITGA6P23229 1130 aa31.83■■■□□ 2.69
U2AF1-203ENST00000398137 GLIS2Q9BZE0 524 aaPredicted RBP31.83■■■□□ 2.69
U2AF1-203ENST00000398137 LRRFIP2Q9Y608 721 aaKnown RBP31.83■■■□□ 2.69
U2AF1-203ENST00000398137 H7C1D1 291 aa31.82■■■□□ 2.68
U2AF1-203ENST00000398137 COL13A1Q5TAT6 717 aaPredicted RBP31.82■■■□□ 2.68
U2AF1-203ENST00000398137 LMBR1LQ6UX01 489 aa31.82■■■□□ 2.68
U2AF1-203ENST00000398137 ZC3H15Q8WU90 426 aaKnown RBP31.82■■■□□ 2.68
U2AF1-203ENST00000398137 CHMP3Q9Y3E7 222 aa31.82■■■□□ 2.68
U2AF1-203ENST00000398137 RPS12P25398 132 aaKnown RBP31.81■■■□□ 2.68
U2AF1-203ENST00000398137 ANKRD44Q8N8A2 993 aa31.81■■■□□ 2.68
U2AF1-203ENST00000398137 POLR2AP24928 1970 aaKnown RBP31.81■■■□□ 2.68
U2AF1-203ENST00000398137 A0A1B0GUL6 1792 aa31.8■■■□□ 2.68
U2AF1-203ENST00000398137 ZNF609O15014 1411 aa31.8■■■□□ 2.68
U2AF1-203ENST00000398137 MED23Q9ULK4 1368 aa31.8■■■□□ 2.68
U2AF1-203ENST00000398137 ZBTB7BO15156 539 aaPredicted RBP31.79■■■□□ 2.68
U2AF1-203ENST00000398137 DEFB115Q30KQ5 88 aa31.79■■■□□ 2.68
U2AF1-203ENST00000398137 TBC1D10BQ4KMP7 808 aaPredicted RBP31.79■■■□□ 2.68
U2AF1-203ENST00000398137 DDX19BQ9UMR2 479 aa31.79■■■□□ 2.68
U2AF1-203ENST00000398137 DLK2Q6UY11 383 aa31.78■■■□□ 2.68
U2AF1-203ENST00000398137 TXNRD3Q86VQ6 643 aa31.78■■■□□ 2.68
U2AF1-203ENST00000398137 ABT1Q9ULW3 272 aaKnown RBP31.78■■■□□ 2.68
U2AF1-203ENST00000398137 HDAC5Q9UQL6 1122 aa31.78■■■□□ 2.68
U2AF1-203ENST00000398137 RABL6Q3YEC7 729 aaPredicted RBP31.77■■■□□ 2.68
U2AF1-203ENST00000398137 GMLQ99445 158 aa31.77■■■□□ 2.68
U2AF1-203ENST00000398137 GNAI2P04899 355 aa31.76■■■□□ 2.67
U2AF1-203ENST00000398137 IGHMBP2P38935 993 aaKnown RBP31.76■■■□□ 2.67
U2AF1-203ENST00000398137 C1orf115Q9H7X2 142 aa31.76■■■□□ 2.67
U2AF1-203ENST00000398137 THSD7BQ9C0I4 1608 aa31.75■■■□□ 2.67
U2AF1-203ENST00000398137 KLRK1P26718 216 aa31.75■■■□□ 2.67
U2AF1-203ENST00000398137 RSBN1LQ6PCB5 846 aaPredicted RBP31.75■■■□□ 2.67
U2AF1-203ENST00000398137 TLL2Q9Y6L7 1015 aa31.75■■■□□ 2.67
U2AF1-203ENST00000398137 G3V3G9 751 aa31.74■■■□□ 2.67
U2AF1-203ENST00000398137 DCAF8Q5TAQ9 597 aa31.74■■■□□ 2.67
U2AF1-203ENST00000398137 PODNQ7Z5L7 613 aa31.74■■■□□ 2.67
U2AF1-203ENST00000398137 ANKRD18BA2A2Z9 1011 aa31.73■■■□□ 2.67
U2AF1-203ENST00000398137 IFIT5Q13325 482 aaKnown RBP31.73■■■□□ 2.67
U2AF1-203ENST00000398137 RBM26Q5T8P6 1007 aaKnown RBP31.73■■■□□ 2.67
U2AF1-203ENST00000398137 CDC37L1Q7L3B6 337 aa31.73■■■□□ 2.67
U2AF1-203ENST00000398137 LEMD3Q9Y2U8 911 aa31.73■■■□□ 2.67
U2AF1-203ENST00000398137 ASTN2O75129 1339 aaPredicted RBP31.73■■■□□ 2.67
U2AF1-203ENST00000398137 WDR33Q9C0J8 1336 aaKnown RBP31.73■■■□□ 2.67
U2AF1-203ENST00000398137 CELF2O95319 508 aaKnown RBP31.72■■■□□ 2.67
U2AF1-203ENST00000398137 ZNF280AP59817 542 aaPredicted RBP31.72■■■□□ 2.67
U2AF1-203ENST00000398137 USP48Q86UV5 1035 aa31.72■■■□□ 2.67
U2AF1-203ENST00000398137 IRS2Q9Y4H2 1338 aa31.72■■■□□ 2.67
U2AF1-203ENST00000398137 CENPBP07199 599 aaPredicted RBP31.71■■■□□ 2.67
U2AF1-203ENST00000398137 CHRNDQ07001 517 aa31.71■■■□□ 2.67
U2AF1-203ENST00000398137 CCDC57Q2TAC2 916 aa31.71■■■□□ 2.67
U2AF1-203ENST00000398137 AGBL3Q8NEM8 1001 aa31.71■■■□□ 2.67
U2AF1-203ENST00000398137 CRBNQ96SW2 442 aa31.71■■■□□ 2.67
U2AF1-203ENST00000398137 MPHOSPH8Q99549 860 aa31.71■■■□□ 2.67
U2AF1-203ENST00000398137 ZNF804BA4D1E1 1349 aa31.71■■■□□ 2.67
U2AF1-203ENST00000398137 USP17L3A6NCW0 530 aa31.7■■■□□ 2.67
U2AF1-203ENST00000398137 USP17L4A6NCW7 530 aa31.7■■■□□ 2.67
U2AF1-203ENST00000398137 SNAP23O00161 211 aa31.7■■■□□ 2.67
U2AF1-203ENST00000398137 FOXN1O15353 648 aa31.7■■■□□ 2.67
U2AF1-203ENST00000398137 KIF4BQ2VIQ3 1234 aa31.7■■■□□ 2.67
U2AF1-203ENST00000398137 USP17L1Q7RTZ2 530 aa31.7■■■□□ 2.67
U2AF1-203ENST00000398137 SAPCD2Q86UD0 394 aa31.7■■■□□ 2.67
U2AF1-203ENST00000398137 CYP4F22Q6NT55 531 aa31.69■■■□□ 2.66
U2AF1-203ENST00000398137 MXD3Q9BW11 206 aa31.69■■■□□ 2.66
U2AF1-203ENST00000398137 ANKRD2Q9GZV1 360 aa31.69■■■□□ 2.66
U2AF1-203ENST00000398137 WBP1LQ9NX94 342 aa31.69■■■□□ 2.66
U2AF1-203ENST00000398137 TAF7LQ5H9L4 462 aa31.68■■■□□ 2.66
U2AF1-203ENST00000398137 DACT2Q5SW24 774 aa31.68■■■□□ 2.66
U2AF1-203ENST00000398137 ZNF594Q96JF6 807 aaPredicted RBP31.68■■■□□ 2.66
U2AF1-203ENST00000398137 CHMP4BQ9H444 224 aaKnown RBP31.68■■■□□ 2.66
U2AF1-203ENST00000398137 ZBTB40Q9NUA8 1239 aa31.68■■■□□ 2.66
U2AF1-203ENST00000398137 CAPNS2Q96L46 248 aa31.67■■■□□ 2.66
U2AF1-203ENST00000398137 COA1Q9GZY4 146 aa31.67■■■□□ 2.66
U2AF1-203ENST00000398137 ADM5C9JUS6 153 aa31.66■■■□□ 2.66
U2AF1-203ENST00000398137 HELBQ8NG08 1087 aaPredicted RBP31.66■■■□□ 2.66
U2AF1-203ENST00000398137 ZNF408Q9H9D4 720 aa31.66■■■□□ 2.66
U2AF1-203ENST00000398137 TAF5LO75529 589 aa31.65■■■□□ 2.66
U2AF1-203ENST00000398137 MTX1Q13505 466 aa31.65■■■□□ 2.66
U2AF1-203ENST00000398137 KRT26Q7Z3Y9 468 aa31.65■■■□□ 2.66
U2AF1-203ENST00000398137 USP17L8P0C7I0 530 aa31.64■■■□□ 2.66
U2AF1-203ENST00000398137 KLHDC4Q8TBB5 520 aa31.64■■■□□ 2.66
U2AF1-203ENST00000398137 GGA3Q9NZ52 723 aa31.64■■■□□ 2.66
U2AF1-203ENST00000398137 SRGAP3O43295 1099 aa31.63■■■□□ 2.65
U2AF1-203ENST00000398137 RFX5P48382 616 aaPredicted RBP31.63■■■□□ 2.65
U2AF1-203ENST00000398137 IRX6P78412 446 aaPredicted RBP31.62■■■□□ 2.65
U2AF1-203ENST00000398137 STRIP1Q5VSL9 837 aa31.62■■■□□ 2.65
U2AF1-203ENST00000398137 MYOZ2Q9NPC6 264 aa31.62■■■□□ 2.65
U2AF1-203ENST00000398137 PNMA6EA0A0J9YXQ4 647 aa31.61■■■□□ 2.65
U2AF1-203ENST00000398137 SCARF1Q14162 830 aa31.61■■■□□ 2.65
U2AF1-203ENST00000398137 CEP85Q6P2H3 762 aa31.61■■■□□ 2.65
U2AF1-203ENST00000398137 C15orf52Q6ZUT6 534 aaKnown RBP31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms