RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 IRS4O14654 1257 aaPredicted RBP17.86■□□□□ 0.45
GNE-202ENST00000396594 POLR3GO15318 223 aaPredicted RBP17.86■□□□□ 0.45
GNE-202ENST00000396594 ALG1Q9BT22 464 aa17.86■□□□□ 0.45
GNE-202ENST00000396594 USP25Q9UHP3 1055 aa17.86■□□□□ 0.45
GNE-202ENST00000396594 AATKQ6ZMQ8 1374 aa17.86■□□□□ 0.45
GNE-202ENST00000396594 LUZP1Q86V48 1076 aa17.85■□□□□ 0.45
GNE-202ENST00000396594 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
GNE-202ENST00000396594 FAM135BQ49AJ0 1406 aa17.85■□□□□ 0.45
GNE-202ENST00000396594 ATP5J2-PTCD1G3V325 749 aa17.85■□□□□ 0.45
GNE-202ENST00000396594 TICAM2Q86XR7 235 aa17.85■□□□□ 0.45
GNE-202ENST00000396594 JDP2Q8WYK2 163 aa17.85■□□□□ 0.45
GNE-202ENST00000396594 TRIM75PA6NK02 468 aa17.85■□□□□ 0.45
GNE-202ENST00000396594 SSFA2P28290 1259 aa17.85■□□□□ 0.45
GNE-202ENST00000396594 ENOX2Q16206 610 aaKnown RBP17.85■□□□□ 0.45
GNE-202ENST00000396594 CEP85Q6P2H3 762 aa17.85■□□□□ 0.45
GNE-202ENST00000396594 EYA1Q99502 592 aa17.85■□□□□ 0.45
GNE-202ENST00000396594 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.85■□□□□ 0.451e-6■■■■□ 22.3
GNE-202ENST00000396594 PDE8AO60658 829 aa17.84■□□□□ 0.45
GNE-202ENST00000396594 SYCP3Q8IZU3 236 aa17.84■□□□□ 0.45
GNE-202ENST00000396594 WDR66Q8TBY9 1149 aa17.84■□□□□ 0.45
GNE-202ENST00000396594 LDHBP07195 334 aaKnown RBP17.84■□□□□ 0.45
GNE-202ENST00000396594 IQCDQ96DY2 449 aa17.84■□□□□ 0.45
GNE-202ENST00000396594 MEIS3Q99687 375 aa17.84■□□□□ 0.45
GNE-202ENST00000396594 MROH5Q6ZUA9 1318 aa17.84■□□□□ 0.45
GNE-202ENST00000396594 SHTN1A0MZ66 631 aa17.84■□□□□ 0.45
GNE-202ENST00000396594 STAMBPO95630 424 aa17.84■□□□□ 0.45
GNE-202ENST00000396594 KRT2P35908 639 aa17.84■□□□□ 0.45
GNE-202ENST00000396594 SMC1AQ14683 1233 aaKnown RBP17.84■□□□□ 0.45
GNE-202ENST00000396594 KIF4BQ2VIQ3 1234 aa17.84■□□□□ 0.45
GNE-202ENST00000396594 TRAPPC3LQ5T215 181 aa17.84■□□□□ 0.45
GNE-202ENST00000396594 CEP128Q6ZU80 1094 aa17.84■□□□□ 0.45
GNE-202ENST00000396594 DHX32Q7L7V1 743 aaKnown RBP17.84■□□□□ 0.45
GNE-202ENST00000396594 TBC1D22AQ8WUA7 517 aa17.84■□□□□ 0.45
GNE-202ENST00000396594 EFCAB6Q5THR3 1501 aa17.84■□□□□ 0.45
GNE-202ENST00000396594 PRIMPOLQ96LW4 560 aa17.84■□□□□ 0.45
GNE-202ENST00000396594 SH3TC1Q8TE82 1336 aa17.83■□□□□ 0.45
GNE-202ENST00000396594 PUM3Q15397 648 aaKnown RBP17.83■□□□□ 0.45
GNE-202ENST00000396594 TMX3Q96JJ7 454 aa17.83■□□□□ 0.45
GNE-202ENST00000396594 MAP3K19Q56UN5 1328 aa17.83■□□□□ 0.45
GNE-202ENST00000396594 HS1BP3Q53T59 392 aa17.83■□□□□ 0.44
GNE-202ENST00000396594 FERMT3Q86UX7 667 aa17.83■□□□□ 0.44
GNE-202ENST00000396594 SSH2Q76I76 1423 aa17.83■□□□□ 0.44
GNE-202ENST00000396594 STAT6P42226 847 aa17.83■□□□□ 0.44
GNE-202ENST00000396594 CHRNA2Q15822 529 aa17.83■□□□□ 0.44
GNE-202ENST00000396594 MICU3Q86XE3 530 aa17.83■□□□□ 0.44
GNE-202ENST00000396594 STK32BQ9NY57 414 aa17.83■□□□□ 0.44
GNE-202ENST00000396594 SLC9C2Q5TAH2 1124 aa17.83■□□□□ 0.44
GNE-202ENST00000396594 ZBTB40Q9NUA8 1239 aa17.83■□□□□ 0.44
GNE-202ENST00000396594 SMARCC2Q8TAQ2 1214 aa17.82■□□□□ 0.44
GNE-202ENST00000396594 BLMP54132 1417 aaPredicted RBP17.82■□□□□ 0.44
GNE-202ENST00000396594 KRT79Q5XKE5 535 aa17.82■□□□□ 0.44
GNE-202ENST00000396594 SREK1Q8WXA9 508 aaKnown RBP17.82■□□□□ 0.44
GNE-202ENST00000396594 EYA2O00167 538 aa17.82■□□□□ 0.44
GNE-202ENST00000396594 IL13P35225 146 aa17.82■□□□□ 0.44
GNE-202ENST00000396594 TDRD12Q587J7 1177 aaKnown RBP17.82■□□□□ 0.44
GNE-202ENST00000396594 LRSAM1Q6UWE0 723 aa17.82■□□□□ 0.44
GNE-202ENST00000396594 IMPG2Q9BZV3 1241 aa17.82■□□□□ 0.44
GNE-202ENST00000396594 SPDYE3A6NKU9 549 aa17.81■□□□□ 0.44
GNE-202ENST00000396594 C20orf194Q5TEA3 1177 aa17.81■□□□□ 0.44
GNE-202ENST00000396594 TMED8Q6PL24 325 aaPredicted RBP17.81■□□□□ 0.44
GNE-202ENST00000396594 STMN4Q9H169 189 aaPredicted RBP17.81■□□□□ 0.44
GNE-202ENST00000396594 ZNF165P49910 485 aa17.81■□□□□ 0.44
GNE-202ENST00000396594 TUBB2AQ13885 445 aa17.81■□□□□ 0.44
GNE-202ENST00000396594 TUBB2BQ9BVA1 445 aa17.81■□□□□ 0.44
GNE-202ENST00000396594 SYNMO15061 1565 aa17.81■□□□□ 0.44
GNE-202ENST00000396594 ACTN2P35609 894 aa17.81■□□□□ 0.44
GNE-202ENST00000396594 KRT83P78385 493 aa17.81■□□□□ 0.44
GNE-202ENST00000396594 PIBF1Q8WXW3 757 aa17.81■□□□□ 0.44
GNE-202ENST00000396594 PRC1O43663 620 aa17.81■□□□□ 0.44
GNE-202ENST00000396594 BRF1Q92994 677 aa17.81■□□□□ 0.44
GNE-202ENST00000396594 SELENOOQ9BVL4 669 aa17.81■□□□□ 0.44
GNE-202ENST00000396594 UBA5Q9GZZ9 404 aa17.81■□□□□ 0.44
GNE-202ENST00000396594 KDM5CP41229 1560 aa17.81■□□□□ 0.44
GNE-202ENST00000396594 FAM83GA6ND36 823 aa17.8■□□□□ 0.44
GNE-202ENST00000396594 C8orf58Q8NAV2 365 aa17.8■□□□□ 0.44
GNE-202ENST00000396594 FAM200AQ8TCP9 573 aa17.8■□□□□ 0.44
GNE-202ENST00000396594 RASAL2Q9UJF2 1139 aa17.8■□□□□ 0.44
GNE-202ENST00000396594 TTC37Q6PGP7 1564 aa17.8■□□□□ 0.44
GNE-202ENST00000396594 SSR1P43307 286 aaKnown RBP17.8■□□□□ 0.44
GNE-202ENST00000396594 TRIM14Q14142 442 aa17.8■□□□□ 0.44
GNE-202ENST00000396594 TRIM47Q96LD4 638 aa17.8■□□□□ 0.44
GNE-202ENST00000396594 CHL1O00533 1208 aa17.8■□□□□ 0.44
GNE-202ENST00000396594 NDC80O14777 642 aa17.8■□□□□ 0.44
GNE-202ENST00000396594 RPL13P26373 211 aaKnown RBP17.8■□□□□ 0.44
GNE-202ENST00000396594 PLCD1P51178 756 aa17.8■□□□□ 0.44
GNE-202ENST00000396594 NAPAP54920 295 aa17.8■□□□□ 0.44
GNE-202ENST00000396594 ZNF790Q6PG37 636 aa17.8■□□□□ 0.44
GNE-202ENST00000396594 TMC4Q7Z404 712 aa17.8■□□□□ 0.44
GNE-202ENST00000396594 SLC52A2Q9HAB3 445 aa17.8■□□□□ 0.44
GNE-202ENST00000396594 F13A1P00488 732 aa17.79■□□□□ 0.44
GNE-202ENST00000396594 LMOD1P29536 600 aaPredicted RBP17.79■□□□□ 0.44
GNE-202ENST00000396594 PTPRTO14522 1441 aa17.79■□□□□ 0.44
GNE-202ENST00000396594 CCT2P78371 535 aaKnown RBP17.79■□□□□ 0.44
GNE-202ENST00000396594 HOXA7P31268 230 aaPredicted RBP17.79■□□□□ 0.44
GNE-202ENST00000396594 CLUL1Q15846 466 aa17.79■□□□□ 0.44
GNE-202ENST00000396594 DRC1Q96MC2 740 aa17.79■□□□□ 0.44
GNE-202ENST00000396594 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.79■□□□□ 0.44
GNE-202ENST00000396594 UQCRHLA0A096LP55 91 aa17.79■□□□□ 0.44
GNE-202ENST00000396594 UQCRHP07919 91 aa17.79■□□□□ 0.44
GNE-202ENST00000396594 PCP11498 1178 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms