RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ZBTB42B2RXF5 422 aa6.94□□□□□ -1.3
GABPB1-204ENST00000396464 NRLP54845 237 aa6.94□□□□□ -1.3
GABPB1-204ENST00000396464 IRX6P78412 446 aaPredicted RBP6.94□□□□□ -1.3
GABPB1-204ENST00000396464 PLAURQ03405 335 aa6.94□□□□□ -1.3
GABPB1-204ENST00000396464 DCAF11Q8TEB1 546 aa6.94□□□□□ -1.3
GABPB1-204ENST00000396464 TTC9Q92623 222 aa6.94□□□□□ -1.3
GABPB1-204ENST00000396464 SBNO2Q9Y2G9 1366 aa6.94□□□□□ -1.3
GABPB1-204ENST00000396464 GRNP28799 593 aaKnown RBP6.93□□□□□ -1.3
GABPB1-204ENST00000396464 HDLBPQ00341 1268 aaKnown RBP6.93□□□□□ -1.3
GABPB1-204ENST00000396464 TREML1Q86YW5 311 aa6.93□□□□□ -1.3
GABPB1-204ENST00000396464 PIK3R5Q8WYR1 880 aa6.93□□□□□ -1.3
GABPB1-204ENST00000396464 TANGO6Q9C0B7 1094 aa6.93□□□□□ -1.3
GABPB1-204ENST00000396464 SLC52A1Q9NWF4 448 aa6.93□□□□□ -1.3
GABPB1-204ENST00000396464 TLR7Q9NYK1 1049 aaKnown RBP6.93□□□□□ -1.3
GABPB1-204ENST00000396464 USP20Q9Y2K6 914 aa6.93□□□□□ -1.3
GABPB1-204ENST00000396464 TPD52L2O43399 206 aaKnown RBP6.93□□□□□ -1.3
GABPB1-204ENST00000396464 GRIK5Q16478 980 aa6.93□□□□□ -1.3
GABPB1-204ENST00000396464 GDF6Q6KF10 455 aaPredicted RBP6.93□□□□□ -1.3
GABPB1-204ENST00000396464 PLD4Q96BZ4 506 aa6.93□□□□□ -1.3
GABPB1-204ENST00000396464 KRTAP4-8Q9BYQ9 185 aa6.93□□□□□ -1.3
GABPB1-204ENST00000396464 MYH16Q9H6N6 1097 aa6.93□□□□□ -1.3
GABPB1-204ENST00000396464 LOC102724428A0A0B4J2F2 783 aa6.92□□□□□ -1.3
GABPB1-204ENST00000396464 TLDC2A0PJX2 215 aa6.92□□□□□ -1.3
GABPB1-204ENST00000396464 NOS3P29474 1203 aa6.92□□□□□ -1.3
GABPB1-204ENST00000396464 SIK1P57059 783 aa6.92□□□□□ -1.3
GABPB1-204ENST00000396464 C9orf131Q5VYM1 1079 aa6.92□□□□□ -1.3
GABPB1-204ENST00000396464 NSUN5Q96P11 429 aaKnown RBP6.92□□□□□ -1.3
GABPB1-204ENST00000396464 SSBP4Q9BWG4 385 aaPredicted RBP6.92□□□□□ -1.3
GABPB1-204ENST00000396464 KLHL42Q9P2K6 505 aa6.92□□□□□ -1.3
GABPB1-204ENST00000396464 J3QW42 95 aa6.91□□□□□ -1.3
GABPB1-204ENST00000396464 OPLAHO14841 1288 aa6.91□□□□□ -1.3
GABPB1-204ENST00000396464 SCNN1AP37088 669 aa6.91□□□□□ -1.3
GABPB1-204ENST00000396464 RAD51AP2Q09MP3 1159 aa6.91□□□□□ -1.3
GABPB1-204ENST00000396464 EGFLAMQ63HQ2 1017 aa6.91□□□□□ -1.3
GABPB1-204ENST00000396464 IL22RA1Q8N6P7 574 aa6.91□□□□□ -1.3
GABPB1-204ENST00000396464 BACH2Q9BYV9 841 aa6.91□□□□□ -1.3
GABPB1-204ENST00000396464 AKTIPQ9H8T0 292 aa6.91□□□□□ -1.3
GABPB1-204ENST00000396464 HYAL3O43820 417 aaPredicted RBP6.9□□□□□ -1.31
GABPB1-204ENST00000396464 EGFRP00533 1210 aa6.9□□□□□ -1.31
GABPB1-204ENST00000396464 GORABQ5T7V8 394 aa6.9□□□□□ -1.31
GABPB1-204ENST00000396464 SDE2Q6IQ49 451 aa6.9□□□□□ -1.31
GABPB1-204ENST00000396464 EXOC8Q8IYI6 725 aa6.9□□□□□ -1.31
GABPB1-204ENST00000396464 DHX38Q92620 1227 aaKnown RBP6.9□□□□□ -1.31
GABPB1-204ENST00000396464 CLP1Q92989 425 aaKnown RBP6.9□□□□□ -1.31
GABPB1-204ENST00000396464 PRIMPOLQ96LW4 560 aa6.9□□□□□ -1.31
GABPB1-204ENST00000396464 MRPL18Q9H0U6 180 aaKnown RBP6.9□□□□□ -1.31
GABPB1-204ENST00000396464 SCAMP3O14828 347 aaKnown RBP6.89□□□□□ -1.31
GABPB1-204ENST00000396464 MMP20O60882 483 aa6.89□□□□□ -1.31
GABPB1-204ENST00000396464 ATP2B4P23634 1241 aa6.89□□□□□ -1.31
GABPB1-204ENST00000396464 FAM69CQ0P6D2 419 aa6.89□□□□□ -1.31
GABPB1-204ENST00000396464 ILDR2Q71H61 639 aa6.89□□□□□ -1.31
GABPB1-204ENST00000396464 MAP4K3Q8IVH8 894 aa6.89□□□□□ -1.31
GABPB1-204ENST00000396464 TINF2Q9BSI4 451 aa6.89□□□□□ -1.31
GABPB1-204ENST00000396464 METTL14Q9HCE5 456 aaKnown RBP6.89□□□□□ -1.31
GABPB1-204ENST00000396464 SRA1Q9HD15 236 aaKnown RBP6.89□□□□□ -1.31
GABPB1-204ENST00000396464 FAM13BQ9NYF5 915 aa6.89□□□□□ -1.31
GABPB1-204ENST00000396464 LRFN2Q9ULH4 789 aa6.89□□□□□ -1.31
GABPB1-204ENST00000396464 TBX22Q9Y458 520 aa6.89□□□□□ -1.31
GABPB1-204ENST00000396464 PRMT3O60678 531 aa6.88□□□□□ -1.31
GABPB1-204ENST00000396464 DEAF1O75398 565 aaPredicted RBP6.88□□□□□ -1.31
GABPB1-204ENST00000396464 FKBP5Q13451 457 aaPredicted RBP6.88□□□□□ -1.31
GABPB1-204ENST00000396464 SWI5Q1ZZU3 235 aa6.88□□□□□ -1.31
GABPB1-204ENST00000396464 CCDC144BQ3MJ40 725 aa6.88□□□□□ -1.31
GABPB1-204ENST00000396464 COX20Q5RI15 118 aa6.88□□□□□ -1.31
GABPB1-204ENST00000396464 MEGF10Q96KG7 1140 aa6.88□□□□□ -1.31
GABPB1-204ENST00000396464 SPACA7Q96KW9 195 aa6.88□□□□□ -1.31
GABPB1-204ENST00000396464 BCL11AQ9H165 835 aa6.88□□□□□ -1.31
GABPB1-204ENST00000396464 MUC3BQ9H195 1237 aa6.88□□□□□ -1.31
GABPB1-204ENST00000396464 PRKAG2Q9UGJ0 569 aa6.88□□□□□ -1.31
GABPB1-204ENST00000396464 hCG_2014768A0A024R1R8 64 aa6.87□□□□□ -1.31
GABPB1-204ENST00000396464 DLL1O00548 723 aa6.87□□□□□ -1.31
GABPB1-204ENST00000396464 PTCD1O75127 700 aaKnown RBP6.87□□□□□ -1.31
GABPB1-204ENST00000396464 SOX18P35713 384 aa6.87□□□□□ -1.31
GABPB1-204ENST00000396464 MRPL58Q14197 206 aaKnown RBP6.87□□□□□ -1.31
GABPB1-204ENST00000396464 PTPROQ16827 1216 aa6.87□□□□□ -1.31
GABPB1-204ENST00000396464 PRR23CQ6ZRP0 262 aa6.87□□□□□ -1.31
GABPB1-204ENST00000396464 NLRP13Q86W25 1043 aa6.87□□□□□ -1.31
GABPB1-204ENST00000396464 CACTIN-AS1Q8N1I8 211 aa6.87□□□□□ -1.31
GABPB1-204ENST00000396464 NLGN1Q8N2Q7 840 aa6.87□□□□□ -1.31
GABPB1-204ENST00000396464 ASB16Q96NS5 453 aa6.87□□□□□ -1.31
GABPB1-204ENST00000396464 PIF1Q9H611 641 aa6.87□□□□□ -1.31
GABPB1-204ENST00000396464 RNF112Q9ULX5 631 aa6.87□□□□□ -1.31
GABPB1-204ENST00000396464 FAM177BA6PVY3 158 aa6.86□□□□□ -1.31
GABPB1-204ENST00000396464 MAPK1P28482 360 aa6.86□□□□□ -1.31
GABPB1-204ENST00000396464 IGBP1P78318 339 aa6.86□□□□□ -1.31
GABPB1-204ENST00000396464 CCDC181Q5TID7 509 aa6.86□□□□□ -1.31
GABPB1-204ENST00000396464 C16orf46Q6P387 395 aa6.86□□□□□ -1.31
GABPB1-204ENST00000396464 KCNB2Q92953 911 aa6.86□□□□□ -1.31
GABPB1-204ENST00000396464 PCMTD2Q9NV79 361 aa6.86□□□□□ -1.31
GABPB1-204ENST00000396464 FNDC3AQ9Y2H6 1198 aaKnown RBP6.86□□□□□ -1.31
GABPB1-204ENST00000396464 UBAP1LF5GYI3 381 aa6.85□□□□□ -1.31
GABPB1-204ENST00000396464 H3BRB1 525 aa6.85□□□□□ -1.31
GABPB1-204ENST00000396464 ALX3O95076 343 aa6.85□□□□□ -1.31
GABPB1-204ENST00000396464 GLB1P16278 677 aa6.85□□□□□ -1.31
GABPB1-204ENST00000396464 GTF2F1P35269 517 aaKnown RBP eCLIP6.85□□□□□ -1.31
GABPB1-204ENST00000396464 TTC39BQ5VTQ0 682 aaPredicted RBP6.85□□□□□ -1.31
GABPB1-204ENST00000396464 SLC51AQ86UW1 340 aa6.85□□□□□ -1.31
GABPB1-204ENST00000396464 TMEM130Q8N3G9 435 aa6.85□□□□□ -1.31
GABPB1-204ENST00000396464 TUT1Q9H6E5 874 aaKnown RBP6.85□□□□□ -1.31
GABPB1-204ENST00000396464 KCNMB2Q9Y691 235 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms