RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 PLBD2Q8NHP8 589 aa11□□□□□ -0.65
NDE1-201ENST00000396354 SLC4A9Q96Q91 983 aa11□□□□□ -0.65
NDE1-201ENST00000396354 NUP62CLQ9H1M0 184 aa11□□□□□ -0.65
NDE1-201ENST00000396354 ITGB4P16144 1822 aa11□□□□□ -0.65
NDE1-201ENST00000396354 RGL2O15211 777 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 KRT85P78386 507 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 NAA30Q147X3 362 aaPredicted RBP10.99□□□□□ -0.65
NDE1-201ENST00000396354 CSPP1Q1MSJ5 1256 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 CCDC186Q7Z3E2 898 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 SYNE4Q8N205 404 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 DBNDD2Q9BQY9 259 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 COPRSQ9NQ92 184 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 COL22A1Q8NFW1 1626 aaPredicted RBP10.99□□□□□ -0.65
NDE1-201ENST00000396354 EP400Q96L91 3159 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 PLEKHG2Q9H7P9 1386 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 TIMM10P62072 90 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 PTPN21Q16825 1174 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 TNNI3KQ59H18 835 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 ATG9AQ7Z3C6 839 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 PLCD3Q8N3E9 789 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 PIGBQ92521 554 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 FPGT-TNNI3KV9GXZ4 949 aa10.99□□□□□ -0.65
NDE1-201ENST00000396354 GOLIM4O00461 696 aa10.98□□□□□ -0.65
NDE1-201ENST00000396354 NR1I2O75469 434 aa10.98□□□□□ -0.65
NDE1-201ENST00000396354 CCDC192P0DO97 292 aa10.98□□□□□ -0.65
NDE1-201ENST00000396354 ARID5BQ14865 1188 aa10.98□□□□□ -0.65
NDE1-201ENST00000396354 ERC1Q8IUD2 1116 aa10.98□□□□□ -0.65
NDE1-201ENST00000396354 TRMT1Q9NXH9 659 aaKnown RBP10.98□□□□□ -0.65
NDE1-201ENST00000396354 ERVV-2B6SEH9 535 aa10.98□□□□□ -0.65
NDE1-201ENST00000396354 H7C1W4 665 aa10.98□□□□□ -0.65
NDE1-201ENST00000396354 EVA1CP58658 441 aa10.98□□□□□ -0.65
NDE1-201ENST00000396354 LRRC24Q50LG9 513 aa10.98□□□□□ -0.65
NDE1-201ENST00000396354 EVI5LQ96CN4 794 aa10.98□□□□□ -0.65
NDE1-201ENST00000396354 KAT6BQ8WYB5 2073 aa10.98□□□□□ -0.65
NDE1-201ENST00000396354 JCADQ9P266 1359 aa10.98□□□□□ -0.65
NDE1-201ENST00000396354 MED23Q9ULK4 1368 aa10.98□□□□□ -0.65
NDE1-201ENST00000396354 NECTIN1Q15223 517 aa10.97□□□□□ -0.65
NDE1-201ENST00000396354 MAP3K11Q16584 847 aa10.97□□□□□ -0.65
NDE1-201ENST00000396354 VPS53Q5VIR6 699 aa10.97□□□□□ -0.65
NDE1-201ENST00000396354 Q6ZUG5 572 aa10.97□□□□□ -0.65
NDE1-201ENST00000396354 DNAJC10Q8IXB1 793 aa10.97□□□□□ -0.65
NDE1-201ENST00000396354 PUS3Q9BZE2 481 aaKnown RBP10.97□□□□□ -0.65
NDE1-201ENST00000396354 BIN1O00499 593 aa10.97□□□□□ -0.65
NDE1-201ENST00000396354 FKBP4Q02790 459 aaKnown RBP eCLIP10.97□□□□□ -0.65
NDE1-201ENST00000396354 TYRO3Q06418 890 aa10.97□□□□□ -0.65
NDE1-201ENST00000396354 GPHNQ9NQX3 736 aaPredicted RBP10.97□□□□□ -0.65
NDE1-201ENST00000396354 GJB4Q9NTQ9 266 aa10.97□□□□□ -0.65
NDE1-201ENST00000396354 ZNF609O15014 1411 aa10.97□□□□□ -0.65
NDE1-201ENST00000396354 APOBRQ0VD83 1088 aa10.97□□□□□ -0.65
NDE1-201ENST00000396354 CHAF1AQ13111 956 aaPredicted RBP10.96□□□□□ -0.65
NDE1-201ENST00000396354 HSP90AA4PQ58FG1 418 aa10.96□□□□□ -0.65
NDE1-201ENST00000396354 PPP4R3BQ5MIZ7 849 aa10.96□□□□□ -0.65
NDE1-201ENST00000396354 RNF20Q5VTR2 975 aa10.96□□□□□ -0.66
NDE1-201ENST00000396354 KCNB2Q92953 911 aa10.96□□□□□ -0.66
NDE1-201ENST00000396354 C8orf37Q96NL8 207 aa10.96□□□□□ -0.66
NDE1-201ENST00000396354 KCNF1Q9H3M0 494 aa10.96□□□□□ -0.66
NDE1-201ENST00000396354 ATG3Q9NT62 314 aa10.96□□□□□ -0.66
NDE1-201ENST00000396354 DISP2A7MBM2 1401 aa10.96□□□□□ -0.66
NDE1-201ENST00000396354 POLR3DP05423 398 aaPredicted RBP10.96□□□□□ -0.66
NDE1-201ENST00000396354 TTLL5Q6EMB2 1281 aa10.96□□□□□ -0.66
NDE1-201ENST00000396354 HS1BP3Q53T59 392 aa10.95□□□□□ -0.66
NDE1-201ENST00000396354 ZSWIM6Q9HCJ5 1215 aa10.95□□□□□ -0.66
NDE1-201ENST00000396354 SLIT2O94813 1529 aa10.95□□□□□ -0.66
NDE1-201ENST00000396354 RIOK3O14730 519 aaKnown RBP10.95□□□□□ -0.66
NDE1-201ENST00000396354 RXRAP19793 462 aa10.95□□□□□ -0.66
NDE1-201ENST00000396354 ME1P48163 572 aa10.95□□□□□ -0.66
NDE1-201ENST00000396354 ZNF165P49910 485 aa10.95□□□□□ -0.66
NDE1-201ENST00000396354 HLFQ16534 295 aa10.95□□□□□ -0.66
NDE1-201ENST00000396354 PIBF1Q8WXW3 757 aa10.95□□□□□ -0.66
NDE1-201ENST00000396354 MAP4K1Q92918 833 aa10.95□□□□□ -0.66
NDE1-201ENST00000396354 KIF3AQ9Y496 699 aa10.95□□□□□ -0.66
NDE1-201ENST00000396354 LRP6O75581 1613 aa10.94□□□□□ -0.66
NDE1-201ENST00000396354 U2AF2P26368 475 aaKnown RBP eCLIP10.94□□□□□ -0.66
NDE1-201ENST00000396354 DSG3P32926 999 aa10.94□□□□□ -0.66
NDE1-201ENST00000396354 WASHC4Q2M389 1173 aa10.94□□□□□ -0.66
NDE1-201ENST00000396354 GORABQ5T7V8 394 aa10.94□□□□□ -0.66
NDE1-201ENST00000396354 CCDC144CPQ8IYA2 1237 aa10.94□□□□□ -0.66
NDE1-201ENST00000396354 CHMP4CQ96CF2 233 aa10.94□□□□□ -0.66
NDE1-201ENST00000396354 CBX8Q9HC52 389 aa10.94□□□□□ -0.66
NDE1-201ENST00000396354 CWC25Q9NXE8 425 aaPredicted RBP10.94□□□□□ -0.66
NDE1-201ENST00000396354 COL14A1Q05707 1796 aaKnown RBP10.94□□□□□ -0.66
NDE1-201ENST00000396354 BECN2A8MW95 431 aa10.94□□□□□ -0.66
NDE1-201ENST00000396354 PSMA5P28066 241 aa10.94□□□□□ -0.66
NDE1-201ENST00000396354 GOLGA6L19H0YKK7 550 aa10.94□□□□□ -0.66
NDE1-201ENST00000396354 FAM89AQ96GI7 184 aa10.94□□□□□ -0.66
NDE1-201ENST00000396354 NEK1Q96PY6 1258 aa10.94□□□□□ -0.66
NDE1-201ENST00000396354 TMOD3Q9NYL9 352 aa10.94□□□□□ -0.66
NDE1-201ENST00000396354 MRVI1Q9Y6F6 885 aa10.94□□□□□ -0.66
NDE1-201ENST00000396354 TAF5LO75529 589 aa10.93□□□□□ -0.66
NDE1-201ENST00000396354 ATP5JP18859 108 aa10.93□□□□□ -0.66
NDE1-201ENST00000396354 TOB2Q14106 344 aaPredicted RBP10.93□□□□□ -0.66
NDE1-201ENST00000396354 TPD52L1Q16890 204 aaPredicted RBP10.93□□□□□ -0.66
NDE1-201ENST00000396354 LEO1Q8WVC0 666 aaPredicted RBP10.93□□□□□ -0.66
NDE1-201ENST00000396354 NGLY1Q96IV0 654 aa10.93□□□□□ -0.66
NDE1-201ENST00000396354 ISCA1Q9BUE6 129 aa10.93□□□□□ -0.66
NDE1-201ENST00000396354 PLCH1Q4KWH8 1693 aa10.93□□□□□ -0.66
NDE1-201ENST00000396354 EPB41L2O43491 1005 aaKnown RBP10.93□□□□□ -0.66
NDE1-201ENST00000396354 RPS6KB1P23443 525 aa10.93□□□□□ -0.66
NDE1-201ENST00000396354 SH2B1Q9NRF2 756 aaPredicted RBP10.93□□□□□ -0.66
NDE1-201ENST00000396354 DYNC1I1O14576 645 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms