RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 TFCP2Q12800 502 aa23.77■■□□□ 1.4
HOXA9-202ENST00000396345 AAMPQ13685 434 aa23.77■■□□□ 1.4
HOXA9-202ENST00000396345 DPY19L2Q6NUT2 758 aa23.77■■□□□ 1.4
HOXA9-202ENST00000396345 IRS2Q9Y4H2 1338 aa23.77■■□□□ 1.4
HOXA9-202ENST00000396345 ZNF541Q9H0D2 1346 aa23.76■■□□□ 1.39
HOXA9-202ENST00000396345 GLTPD2A6NH11 291 aa23.75■■□□□ 1.39
HOXA9-202ENST00000396345 YDJCA8MPS7 323 aa23.75■■□□□ 1.39
HOXA9-202ENST00000396345 FGFR2P21802 821 aa23.75■■□□□ 1.39
HOXA9-202ENST00000396345 ATP2B3Q16720 1220 aa23.75■■□□□ 1.39
HOXA9-202ENST00000396345 LPIN2Q92539 896 aa23.75■■□□□ 1.39
HOXA9-202ENST00000396345 COA1Q9GZY4 146 aa23.75■■□□□ 1.39
HOXA9-202ENST00000396345 PCDHB15Q9Y5E8 787 aa23.75■■□□□ 1.39
HOXA9-202ENST00000396345 RAD17O75943 681 aa23.74■■□□□ 1.39
HOXA9-202ENST00000396345 SASH1O94885 1247 aa23.74■■□□□ 1.39
HOXA9-202ENST00000396345 IFIT1P09914 478 aaKnown RBP23.74■■□□□ 1.39
HOXA9-202ENST00000396345 SLC5A1P13866 664 aa23.74■■□□□ 1.39
HOXA9-202ENST00000396345 C1QTNF8P60827 252 aa23.74■■□□□ 1.39
HOXA9-202ENST00000396345 CXCL9Q07325 125 aa23.74■■□□□ 1.39
HOXA9-202ENST00000396345 ZNF804AQ7Z570 1209 aa23.74■■□□□ 1.39
HOXA9-202ENST00000396345 PODNQ7Z5L7 613 aa23.74■■□□□ 1.39
HOXA9-202ENST00000396345 EXOC6BQ9Y2D4 811 aa23.74■■□□□ 1.39
HOXA9-202ENST00000396345 AKAP2Q9Y2D5 859 aa23.74■■□□□ 1.39
HOXA9-202ENST00000396345 HSP90AB4PQ58FF6 505 aa23.73■■□□□ 1.39
HOXA9-202ENST00000396345 ZNF526Q8TF50 670 aaPredicted RBP23.73■■□□□ 1.39
HOXA9-202ENST00000396345 KDM2BQ8NHM5 1336 aa23.73■■□□□ 1.39
HOXA9-202ENST00000396345 DDNO94850 711 aaPredicted RBP23.72■■□□□ 1.39
HOXA9-202ENST00000396345 GYG1P46976 350 aa23.72■■□□□ 1.39
HOXA9-202ENST00000396345 CIAPIN1Q6FI81 312 aa23.72■■□□□ 1.39
HOXA9-202ENST00000396345 GPC2Q8N158 579 aa23.72■■□□□ 1.39
HOXA9-202ENST00000396345 FAM84BQ96KN1 310 aaPredicted RBP23.72■■□□□ 1.39
HOXA9-202ENST00000396345 CD209Q9NNX6 404 aa23.72■■□□□ 1.39
HOXA9-202ENST00000396345 KCNQ5Q9NR82 932 aa23.72■■□□□ 1.39
HOXA9-202ENST00000396345 GJA3Q9Y6H8 435 aa23.72■■□□□ 1.39
HOXA9-202ENST00000396345 HIBADHP31937 336 aaKnown RBP23.71■■□□□ 1.39
HOXA9-202ENST00000396345 TNIP1Q15025 636 aa23.71■■□□□ 1.39
HOXA9-202ENST00000396345 CAVIN4Q5BKX8 364 aa23.71■■□□□ 1.39
HOXA9-202ENST00000396345 VPS37DQ86XT2 251 aa23.71■■□□□ 1.39
HOXA9-202ENST00000396345 ERC1Q8IUD2 1116 aa23.71■■□□□ 1.39
HOXA9-202ENST00000396345 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.71■■□□□ 1.39
HOXA9-202ENST00000396345 FBXO33Q7Z6M2 555 aa23.7■■□□□ 1.38
HOXA9-202ENST00000396345 SCN9AQ15858 1988 aa23.7■■□□□ 1.38
HOXA9-202ENST00000396345 A0A1B0GUL7 405 aa23.69■■□□□ 1.38
HOXA9-202ENST00000396345 IL1R1P14778 569 aa23.69■■□□□ 1.38
HOXA9-202ENST00000396345 TIMM10P62072 90 aa23.69■■□□□ 1.38
HOXA9-202ENST00000396345 PSMD14O00487 310 aa23.68■■□□□ 1.38
HOXA9-202ENST00000396345 RAB11FIP3O75154 756 aa23.68■■□□□ 1.38
HOXA9-202ENST00000396345 BCAMP50895 628 aa23.68■■□□□ 1.38
HOXA9-202ENST00000396345 NEUROD6Q96NK8 337 aa23.68■■□□□ 1.38
HOXA9-202ENST00000396345 GPBP1L1Q9HC44 474 aaPredicted RBP23.68■■□□□ 1.38
HOXA9-202ENST00000396345 GPR108Q9NPR9 543 aa23.68■■□□□ 1.38
HOXA9-202ENST00000396345 USP17L3A6NCW0 530 aa23.67■■□□□ 1.38
HOXA9-202ENST00000396345 USP17L4A6NCW7 530 aa23.67■■□□□ 1.38
HOXA9-202ENST00000396345 APBB1O00213 710 aa23.67■■□□□ 1.38
HOXA9-202ENST00000396345 ADORA1P30542 326 aa23.67■■□□□ 1.38
HOXA9-202ENST00000396345 USP17L1Q7RTZ2 530 aa23.67■■□□□ 1.38
HOXA9-202ENST00000396345 ZNF609O15014 1411 aa23.67■■□□□ 1.38
HOXA9-202ENST00000396345 TNNI3KQ59H18 835 aa23.66■■□□□ 1.38
HOXA9-202ENST00000396345 TDRD7Q8NHU6 1098 aaKnown RBP23.66■■□□□ 1.38
HOXA9-202ENST00000396345 RHPN1Q8TCX5 695 aa23.66■■□□□ 1.38
HOXA9-202ENST00000396345 FBXW7Q969H0 707 aa23.66■■□□□ 1.38
HOXA9-202ENST00000396345 KIF1BPQ96EK5 621 aa23.66■■□□□ 1.38
HOXA9-202ENST00000396345 XAGE2Q96GT9 111 aa23.66■■□□□ 1.38
HOXA9-202ENST00000396345 L3MBTL3Q96JM7 780 aaPredicted RBP23.66■■□□□ 1.38
HOXA9-202ENST00000396345 DCTPP1Q9H773 170 aa23.66■■□□□ 1.38
HOXA9-202ENST00000396345 FPGT-TNNI3KV9GXZ4 949 aa23.66■■□□□ 1.38
HOXA9-202ENST00000396345 ARAP2Q8WZ64 1704 aa23.66■■□□□ 1.38
HOXA9-202ENST00000396345 WDR90Q96KV7 1748 aa23.66■■□□□ 1.38
HOXA9-202ENST00000396345 PSME4Q14997 1843 aa23.66■■□□□ 1.38
HOXA9-202ENST00000396345 VIL1P09327 827 aaKnown RBP23.65■■□□□ 1.38
HOXA9-202ENST00000396345 TTLL5Q6EMB2 1281 aa23.65■■□□□ 1.38
HOXA9-202ENST00000396345 RRAGCQ9HB90 399 aa23.65■■□□□ 1.38
HOXA9-202ENST00000396345 GTF2IP78347 998 aa23.64■■□□□ 1.37
HOXA9-202ENST00000396345 STRIP1Q5VSL9 837 aa23.64■■□□□ 1.37
HOXA9-202ENST00000396345 NMRK2Q9NPI5 230 aa23.64■■□□□ 1.37
HOXA9-202ENST00000396345 FRAT2O75474 233 aaPredicted RBP23.63■■□□□ 1.37
HOXA9-202ENST00000396345 GMPSP49915 693 aaPredicted RBP23.63■■□□□ 1.37
HOXA9-202ENST00000396345 HDAC1Q13547 482 aaPredicted RBP23.63■■□□□ 1.37
HOXA9-202ENST00000396345 GORABQ5T7V8 394 aa23.63■■□□□ 1.37
HOXA9-202ENST00000396345 RSBN1LQ6PCB5 846 aaPredicted RBP23.63■■□□□ 1.37
HOXA9-202ENST00000396345 GNL3LQ9NVN8 582 aaKnown RBP23.63■■□□□ 1.37
HOXA9-202ENST00000396345 IQSEC3Q9UPP2 1182 aaPredicted RBP23.63■■□□□ 1.37
HOXA9-202ENST00000396345 ZBTB12Q9Y330 459 aaPredicted RBP23.63■■□□□ 1.37
HOXA9-202ENST00000396345 PHKA1P46020 1223 aa23.62■■□□□ 1.37
HOXA9-202ENST00000396345 DACT2Q5SW24 774 aa23.62■■□□□ 1.37
HOXA9-202ENST00000396345 CCDC102BQ68D86 513 aa23.62■■□□□ 1.37
HOXA9-202ENST00000396345 EAF2Q96CJ1 260 aaPredicted RBP23.62■■□□□ 1.37
HOXA9-202ENST00000396345 IL1RAPL2Q9NP60 686 aa23.62■■□□□ 1.37
HOXA9-202ENST00000396345 IQCA1LA6NCM1 817 aa23.61■■□□□ 1.37
HOXA9-202ENST00000396345 POTECB2RU33 542 aa23.61■■□□□ 1.37
HOXA9-202ENST00000396345 VEGFAP15692 232 aaPredicted RBP23.61■■□□□ 1.37
HOXA9-202ENST00000396345 RPS12P25398 132 aaKnown RBP23.61■■□□□ 1.37
HOXA9-202ENST00000396345 LMOD1P29536 600 aaPredicted RBP23.61■■□□□ 1.37
HOXA9-202ENST00000396345 SCNN1DP51172 638 aa23.61■■□□□ 1.37
HOXA9-202ENST00000396345 LRRCC1Q9C099 1032 aa23.61■■□□□ 1.37
HOXA9-202ENST00000396345 CCDC8Q9H0W5 538 aaPredicted RBP23.61■■□□□ 1.37
HOXA9-202ENST00000396345 RWDD1Q9H446 243 aaPredicted RBP23.61■■□□□ 1.37
HOXA9-202ENST00000396345 HACL1Q9UJ83 578 aa23.61■■□□□ 1.37
HOXA9-202ENST00000396345 JAG2Q9Y219 1238 aa23.61■■□□□ 1.37
HOXA9-202ENST00000396345 FAM205AQ6ZU69 1335 aa23.6■■□□□ 1.37
HOXA9-202ENST00000396345 AACSQ86V21 672 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms