RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 CCDC82Q8N4S0 544 aa7.63□□□□□ -1.19
BDNF-203ENST00000395978 LLPHQ9BRT6 129 aaKnown RBP7.63□□□□□ -1.19
BDNF-203ENST00000395978 CYP27B1O15528 508 aa7.63□□□□□ -1.19
BDNF-203ENST00000395978 BRD2P25440 801 aaKnown RBP7.63□□□□□ -1.19
BDNF-203ENST00000395978 DDB1Q16531 1140 aa7.63□□□□□ -1.19
BDNF-203ENST00000395978 STX1AQ16623 288 aa7.63□□□□□ -1.19
BDNF-203ENST00000395978 MEX3CQ5U5Q3 659 aaKnown RBP7.63□□□□□ -1.19
BDNF-203ENST00000395978 CLEC17AQ6ZS10 378 aa7.63□□□□□ -1.19
BDNF-203ENST00000395978 MFSD6Q6ZSS7 791 aa7.63□□□□□ -1.19
BDNF-203ENST00000395978 TPCN1Q9ULQ1 816 aa7.63□□□□□ -1.19
BDNF-203ENST00000395978 MTMR6Q9Y217 621 aa7.63□□□□□ -1.19
BDNF-203ENST00000395978 MAP2P11137 1827 aaKnown RBP7.63□□□□□ -1.19
BDNF-203ENST00000395978 ATP6V1AP38606 617 aa7.63□□□□□ -1.19
BDNF-203ENST00000395978 PIP4K2BP78356 416 aa7.63□□□□□ -1.19
BDNF-203ENST00000395978 TYRO3Q06418 890 aa7.63□□□□□ -1.19
BDNF-203ENST00000395978 SSRP1Q08945 709 aaKnown RBP7.63□□□□□ -1.19
BDNF-203ENST00000395978 HELBQ8NG08 1087 aaPredicted RBP7.63□□□□□ -1.19
BDNF-203ENST00000395978 APPBP2Q92624 585 aa7.63□□□□□ -1.19
BDNF-203ENST00000395978 NOL7Q9UMY1 257 aaKnown RBP7.63□□□□□ -1.19
BDNF-203ENST00000395978 MTMR7Q9Y216 660 aa7.63□□□□□ -1.19
BDNF-203ENST00000395978 ZBTB43O43298 467 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 ITGA6P23229 1130 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 PTPN12Q05209 780 aaKnown RBP7.62□□□□□ -1.19
BDNF-203ENST00000395978 ANO6Q4KMQ2 910 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 PDILTQ8N807 584 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 KCNG4Q8TDN1 519 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 PPP1R9BQ96SB3 815 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 SEC62Q99442 399 aaKnown RBP7.62□□□□□ -1.19
BDNF-203ENST00000395978 DSCC1Q9BVC3 393 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 UTP14AQ9BVJ6 771 aaKnown RBP7.62□□□□□ -1.19
BDNF-203ENST00000395978 CLIP2Q9UDT6 1046 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 DACH1Q9UI36 760 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 NRKQ7Z2Y5 1582 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 ADCY9O60503 1353 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 ATL3Q6DD88 541 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 IQCA1Q86XH1 822 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 CARD10Q9BWT7 1032 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 DIP2AQ14689 1571 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 ZPR1O75312 459 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 NECTIN1Q15223 517 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 CCDC144CPQ8IYA2 1237 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 MRPS27Q92552 414 aaKnown RBP7.62□□□□□ -1.19
BDNF-203ENST00000395978 ALG1Q9BT22 464 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 CEP131Q9UPN4 1083 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 NIP7Q9Y221 180 aaKnown RBP eCLIP7.62□□□□□ -1.19
BDNF-203ENST00000395978 WDR17Q8IZU2 1322 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 CEMIPQ8WUJ3 1361 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 SHPRHQ149N8 1683 aa7.62□□□□□ -1.19
BDNF-203ENST00000395978 CBFA2T2O43439 604 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 RRP9O43818 475 aaKnown RBP7.61□□□□□ -1.19
BDNF-203ENST00000395978 RANBP6O60518 1105 aaKnown RBP7.61□□□□□ -1.19
BDNF-203ENST00000395978 CDC37L1Q7L3B6 337 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 CCDC112Q8NEF3 446 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 ACSBG1Q96GR2 724 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 ZNF830Q96NB3 372 aaPredicted RBP7.61□□□□□ -1.19
BDNF-203ENST00000395978 CNNM2Q9H8M5 875 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 GPR108Q9NPR9 543 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 JAK2O60674 1132 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 OFD1O75665 1012 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 TXLNAP40222 546 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 LRRC24Q50LG9 513 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 EPHA10Q5JZY3 1008 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 TMTC2Q8N394 836 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 LEO1Q8WVC0 666 aaPredicted RBP7.61□□□□□ -1.19
BDNF-203ENST00000395978 SMARCC1Q92922 1105 aaPredicted RBP7.61□□□□□ -1.19
BDNF-203ENST00000395978 GTF3C6Q969F1 213 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 SLC26A6Q9BXS9 759 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 KRT23Q9C075 422 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 TTC12Q9H892 705 aaPredicted RBP7.61□□□□□ -1.19
BDNF-203ENST00000395978 FBXO3Q9UK99 471 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 SH3TC1Q8TE82 1336 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 CCP110O43303 1012 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 PDE8AO60658 829 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 FILIP1LQ4L180 1135 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 DNAJC25Q9H1X3 360 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 SPATA31A3Q5VYP0 1347 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 GPAA1O43292 621 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 PCCAP05165 728 aaPredicted RBP7.61□□□□□ -1.19
BDNF-203ENST00000395978 CYP7A1P22680 504 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 ZAP70P43403 619 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 ZNF589Q86UQ0 364 aaPredicted RBP7.61□□□□□ -1.19
BDNF-203ENST00000395978 ANKRD18AQ8IVF6 992 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 CCAR2Q8N163 923 aaKnown RBP7.61□□□□□ -1.19
BDNF-203ENST00000395978 NGLY1Q96IV0 654 aa7.61□□□□□ -1.19
BDNF-203ENST00000395978 NCOA5Q9HCD5 579 aaKnown RBP7.61□□□□□ -1.19
BDNF-203ENST00000395978 BIN1O00499 593 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 SPTLC2O15270 562 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 NEMFO60524 1076 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 NOLC1Q14978 699 aaKnown RBP eCLIP7.6□□□□□ -1.19
BDNF-203ENST00000395978 NAA16Q6N069 864 aaPredicted RBP7.6□□□□□ -1.19
BDNF-203ENST00000395978 CTCFLQ8NI51 663 aaPredicted RBP7.6□□□□□ -1.19
BDNF-203ENST00000395978 SLC4A4Q9Y6R1 1079 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 HEG1Q9ULI3 1381 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 E7EWF7 191 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 IPO7O95373 1038 aaKnown RBP7.6□□□□□ -1.19
BDNF-203ENST00000395978 SFPQP23246 707 aaKnown RBP eCLIP7.6□□□□□ -1.19
BDNF-203ENST00000395978 WTAPQ15007 396 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 CFAP100Q494V2 611 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 BRAPQ7Z569 592 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 ZBTB38Q8NAP3 1195 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms